Protein–RNA interactions for Protein: P39959

YER130C, Zinc finger protein YER130C, yeastyeast

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YER130CP39959 NSR1YGR159C 1245 nt22.77■■□□□ 1.24
YER130CP39959 YML009W-BYML009W-B 477 nt22.68■■□□□ 1.22
YER130CP39959 NOP1YDL014W 984 nt21.85■■□□□ 1.09
YER130CP39959 MDJ1YFL016C 1536 nt20.58■□□□□ 0.89
YER130CP39959 YKL036CYKL036C 393 nt19.93■□□□□ 0.78
YER130CP39959 SRX1YKL086W 384 nt19.14■□□□□ 0.65
YER130CP39959 Q0297Q0297 156 nt19.09■□□□□ 0.65
YER130CP39959 YJL027CYJL027C 417 nt18.9■□□□□ 0.62
YER130CP39959 YCR051WYCR051W 669 nt18.13■□□□□ 0.49
YER130CP39959 DBP2YNL112W 1641 nt18.12■□□□□ 0.49
YER130CP39959 SCS3YGL126W 1143 nt18.03■□□□□ 0.48
YER130CP39959 YBR190WYBR190W 312 nt17.57■□□□□ 0.4
YER130CP39959 TRN1tP(UGG)A 72 nt17.52■□□□□ 0.4
YER130CP39959 SUF9tP(UGG)F 72 nt17.52■□□□□ 0.4
YER130CP39959 SUF8tP(UGG)H 72 nt17.52■□□□□ 0.4
YER130CP39959 tP(UGG)LtP(UGG)L 72 nt17.52■□□□□ 0.4
YER130CP39959 SUF7tP(UGG)M 72 nt17.52■□□□□ 0.4
YER130CP39959 tP(UGG)N1tP(UGG)N1 72 nt17.52■□□□□ 0.4
YER130CP39959 tP(UGG)N2tP(UGG)N2 72 nt17.52■□□□□ 0.4
YER130CP39959 tP(UGG)O1tP(UGG)O1 72 nt17.52■□□□□ 0.4
YER130CP39959 SUF11tP(UGG)O2 72 nt17.52■□□□□ 0.4
YER130CP39959 CCC1YLR220W 969 nt17.33■□□□□ 0.36
YER130CP39959 YOL085CYOL085C 342 nt17.3■□□□□ 0.36
YER130CP39959 RTC3YHR087W 336 nt17.15■□□□□ 0.34
YER130CP39959 RPP1BYDL130W 321 nt17.12■□□□□ 0.33
YER130CP39959 PKP1YIL042C 1185 nt17.1■□□□□ 0.33
YER130CP39959 RVS167YDR388W 1449 nt16.84■□□□□ 0.29
YER130CP39959 SCJ1YMR214W 1134 nt16.82■□□□□ 0.28
YER130CP39959 tP(UGG)O3tP(UGG)O3 72 nt16.46■□□□□ 0.23
YER130CP39959 PET122YER153C 765 nt16.43■□□□□ 0.22
YER130CP39959 PUT4YOR348C 1884 nt16.26■□□□□ 0.19
YER130CP39959 SHR5YOL110W 714 nt16.22■□□□□ 0.19
YER130CP39959 SCR1SCR1 522 nt16.09■□□□□ 0.17
YER130CP39959 ATS1YAL020C 1002 nt16.01■□□□□ 0.15
YER130CP39959 URN1YPR152C 1398 nt15.98■□□□□ 0.15
YER130CP39959 DEP1YAL013W 1218 nt15.91■□□□□ 0.14
YER130CP39959 RRN5YLR141W 1092 nt15.91■□□□□ 0.14
YER130CP39959 SSA3YBL075C 1950 nt15.91■□□□□ 0.14
YER130CP39959 YDJ1YNL064C 1230 nt15.9■□□□□ 0.14
YER130CP39959 ARE1YCR048W 1833 nt15.88■□□□□ 0.13
YER130CP39959 SAH1YER043C 1350 nt15.82■□□□□ 0.12
YER130CP39959 OPI9YLR338W 858 nt15.8■□□□□ 0.12
YER130CP39959 POA1YBR022W 534 nt15.7■□□□□ 0.1
YER130CP39959 YHR049C-AYHR049C-A 297 nt15.65■□□□□ 0.1
YER130CP39959 GAR1YHR089C 618 nt15.62■□□□□ 0.09
YER130CP39959 YER088W-BYER088W-B 147 nt15.6■□□□□ 0.09
YER130CP39959 RPN10YHR200W 807 nt15.59■□□□□ 0.09
YER130CP39959 YNL208WYNL208W 600 nt15.57■□□□□ 0.08
YER130CP39959 RSB1YOR049C 1065 nt15.47■□□□□ 0.07
YER130CP39959 BSC6YOL137W 1494 nt15.42■□□□□ 0.06
YER130CP39959 PUN1YLR414C 792 nt15.31■□□□□ 0.04
YER130CP39959 BUD23YCR047C 828 nt15.24■□□□□ 0.03
YER130CP39959 YJR018WYJR018W 363 nt15.21■□□□□ 0.03
YER130CP39959 PTC2YER089C 1395 nt15.21■□□□□ 0.02
YER130CP39959 TIR1YER011W 765 nt15.11■□□□□ 0.01
YER130CP39959 SSA1YAL005C 1929 nt15.04■□□□□ -0
YER130CP39959 NAB2YGL122C 1578 nt15.04■□□□□ -0
YER130CP39959 SPT5YML010W 3192 nt15.01□□□□□ -0.01
YER130CP39959 YJR120WYJR120W 351 nt15.01□□□□□ -0.01
YER130CP39959 PST2YDR032C 597 nt14.9□□□□□ -0.02
YER130CP39959 FIS1YIL065C 468 nt14.86□□□□□ -0.03
YER130CP39959 SRB2YHR041C 633 nt14.8□□□□□ -0.04
YER130CP39959 DAL1YIR027C 1383 nt14.79□□□□□ -0.04
YER130CP39959 RPP2BYDR382W 333 nt14.76□□□□□ -0.05
YER130CP39959 FPR4YLR449W 1179 nt14.74□□□□□ -0.05
YER130CP39959 INM2YDR287W 879 nt14.67□□□□□ -0.06
YER130CP39959 PHO4YFR034C 939 nt14.67□□□□□ -0.06
YER130CP39959 SSA4YER103W 1929 nt14.54□□□□□ -0.08
YER130CP39959 YBL100CYBL100C 315 nt14.52□□□□□ -0.09
YER130CP39959 YPS1YLR120C 1710 nt14.51□□□□□ -0.09
YER130CP39959 MEP2YNL142W 1500 nt14.5□□□□□ -0.09
YER130CP39959 BDH2YAL061W 1254 nt14.47□□□□□ -0.09
YER130CP39959 WWM1YFL010C 636 nt14.43□□□□□ -0.1
YER130CP39959 SHU1YHL006C 453 nt14.39□□□□□ -0.11
YER130CP39959 YDR095CYDR095C 411 nt14.36□□□□□ -0.11
YER130CP39959 FUN26YAL022C 1554 nt14.35□□□□□ -0.11
YER130CP39959 YHR165W-AYHR165W-A 312 nt14.32□□□□□ -0.12
YER130CP39959 DCW1YKL046C 1350 nt14.32□□□□□ -0.12
YER130CP39959 YAL037C-BYAL037C-B 975 nt14.27□□□□□ -0.13
YER130CP39959 TRM9YML014W 840 nt14.22□□□□□ -0.13
YER130CP39959 LSM3YLR438C-A 270 nt14.2□□□□□ -0.14
YER130CP39959 YGR021WYGR021W 873 nt14.17□□□□□ -0.14
YER130CP39959 HOM6YJR139C 1080 nt14.17□□□□□ -0.14
YER130CP39959 YFL021C-AYFL021C-A 855 nt14.15□□□□□ -0.14
YER130CP39959 ALF1YNL148C 765 nt14.15□□□□□ -0.14
YER130CP39959 CCT6YDR188W 1641 nt14.14□□□□□ -0.15
YER130CP39959 PTP1YDL230W 1008 nt14.11□□□□□ -0.15
YER130CP39959 YKL097CYKL097C 411 nt14.11□□□□□ -0.15
YER130CP39959 MNP1YGL068W 585 nt14.09□□□□□ -0.15
YER130CP39959 EMI2YDR516C 1503 nt14.08□□□□□ -0.16
YER130CP39959 RPP2AYOL039W 321 nt14.06□□□□□ -0.16
YER130CP39959 CAC2YML102W 1407 nt14.06□□□□□ -0.16
YER130CP39959 BDF1YLR399C 2061 nt14.05□□□□□ -0.16
YER130CP39959 SIS1YNL007C 1059 nt14□□□□□ -0.17
YER130CP39959 SUF2tP(AGG)C 72 nt13.97□□□□□ -0.17
YER130CP39959 SUF10tP(AGG)N 72 nt13.97□□□□□ -0.17
YER130CP39959 YDL221WYDL221W 552 nt13.96□□□□□ -0.17
YER130CP39959 RKM5YLR137W 1104 nt13.95□□□□□ -0.18
YER130CP39959 YBR220CYBR220C 1683 nt13.94□□□□□ -0.18
YER130CP39959 YMR090WYMR090W 684 nt13.92□□□□□ -0.18
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms