Protein–RNA interactions for Protein: P38742

NPR3, Nitrogen permease regulator 3, yeastyeast

Predictions only

Length 1,146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPR3P38742 NSR1YGR159C 1245 nt22.72■■□□□ 1.23
NPR3P38742 YML009W-BYML009W-B 477 nt22.56■■□□□ 1.2
NPR3P38742 NOP1YDL014W 984 nt21.69■■□□□ 1.06
NPR3P38742 MDJ1YFL016C 1536 nt20.66■□□□□ 0.9
NPR3P38742 YKL036CYKL036C 393 nt19.68■□□□□ 0.74
NPR3P38742 SRX1YKL086W 384 nt18.98■□□□□ 0.63
NPR3P38742 YJL027CYJL027C 417 nt18.96■□□□□ 0.63
NPR3P38742 Q0297Q0297 156 nt18.89■□□□□ 0.61
NPR3P38742 DBP2YNL112W 1641 nt18.11■□□□□ 0.49
NPR3P38742 YCR051WYCR051W 669 nt18.01■□□□□ 0.47
NPR3P38742 SCS3YGL126W 1143 nt17.75■□□□□ 0.43
NPR3P38742 YBR190WYBR190W 312 nt17.63■□□□□ 0.41
NPR3P38742 TRN1tP(UGG)A 72 nt17.43■□□□□ 0.38
NPR3P38742 SUF9tP(UGG)F 72 nt17.43■□□□□ 0.38
NPR3P38742 SUF8tP(UGG)H 72 nt17.43■□□□□ 0.38
NPR3P38742 tP(UGG)LtP(UGG)L 72 nt17.43■□□□□ 0.38
NPR3P38742 SUF7tP(UGG)M 72 nt17.43■□□□□ 0.38
NPR3P38742 tP(UGG)N1tP(UGG)N1 72 nt17.43■□□□□ 0.38
NPR3P38742 tP(UGG)N2tP(UGG)N2 72 nt17.43■□□□□ 0.38
NPR3P38742 tP(UGG)O1tP(UGG)O1 72 nt17.43■□□□□ 0.38
NPR3P38742 SUF11tP(UGG)O2 72 nt17.43■□□□□ 0.38
NPR3P38742 CCC1YLR220W 969 nt17.28■□□□□ 0.36
NPR3P38742 RTC3YHR087W 336 nt17.24■□□□□ 0.35
NPR3P38742 YOL085CYOL085C 342 nt17.1■□□□□ 0.33
NPR3P38742 RPP1BYDL130W 321 nt16.96■□□□□ 0.31
NPR3P38742 PKP1YIL042C 1185 nt16.93■□□□□ 0.3
NPR3P38742 RVS167YDR388W 1449 nt16.82■□□□□ 0.28
NPR3P38742 SCJ1YMR214W 1134 nt16.8■□□□□ 0.28
NPR3P38742 PUT4YOR348C 1884 nt16.37■□□□□ 0.21
NPR3P38742 tP(UGG)O3tP(UGG)O3 72 nt16.36■□□□□ 0.21
NPR3P38742 PET122YER153C 765 nt16.31■□□□□ 0.2
NPR3P38742 SSA3YBL075C 1950 nt16.25■□□□□ 0.19
NPR3P38742 SHR5YOL110W 714 nt16.19■□□□□ 0.18
NPR3P38742 URN1YPR152C 1398 nt16.01■□□□□ 0.15
NPR3P38742 ARE1YCR048W 1833 nt15.96■□□□□ 0.15
NPR3P38742 DEP1YAL013W 1218 nt15.93■□□□□ 0.14
NPR3P38742 SCR1SCR1 522 nt15.92■□□□□ 0.14
NPR3P38742 SAH1YER043C 1350 nt15.89■□□□□ 0.13
NPR3P38742 POA1YBR022W 534 nt15.85■□□□□ 0.13
NPR3P38742 OPI9YLR338W 858 nt15.84■□□□□ 0.13
NPR3P38742 YDJ1YNL064C 1230 nt15.8■□□□□ 0.12
NPR3P38742 RRN5YLR141W 1092 nt15.77■□□□□ 0.12
NPR3P38742 YHR049C-AYHR049C-A 297 nt15.76■□□□□ 0.11
NPR3P38742 ATS1YAL020C 1002 nt15.74■□□□□ 0.11
NPR3P38742 RPN10YHR200W 807 nt15.6■□□□□ 0.09
NPR3P38742 BSC6YOL137W 1494 nt15.58■□□□□ 0.08
NPR3P38742 GAR1YHR089C 618 nt15.56■□□□□ 0.08
NPR3P38742 YNL208WYNL208W 600 nt15.56■□□□□ 0.08
NPR3P38742 YER088W-BYER088W-B 147 nt15.47■□□□□ 0.07
NPR3P38742 BUD23YCR047C 828 nt15.35■□□□□ 0.05
NPR3P38742 PUN1YLR414C 792 nt15.34■□□□□ 0.05
NPR3P38742 RSB1YOR049C 1065 nt15.32■□□□□ 0.04
NPR3P38742 PTC2YER089C 1395 nt15.27■□□□□ 0.04
NPR3P38742 YJR018WYJR018W 363 nt15.22■□□□□ 0.03
NPR3P38742 SPT5YML010W 3192 nt15.15■□□□□ 0.02
NPR3P38742 NAB2YGL122C 1578 nt15.08■□□□□ 0
NPR3P38742 TIR1YER011W 765 nt15.03■□□□□ -0
NPR3P38742 YJR120WYJR120W 351 nt15.01□□□□□ -0.01
NPR3P38742 SSA1YAL005C 1929 nt14.98□□□□□ -0.01
NPR3P38742 FIS1YIL065C 468 nt14.91□□□□□ -0.02
NPR3P38742 DAL1YIR027C 1383 nt14.83□□□□□ -0.04
NPR3P38742 FPR4YLR449W 1179 nt14.81□□□□□ -0.04
NPR3P38742 SSA4YER103W 1929 nt14.78□□□□□ -0.04
NPR3P38742 RPP2BYDR382W 333 nt14.76□□□□□ -0.05
NPR3P38742 SRB2YHR041C 633 nt14.76□□□□□ -0.05
NPR3P38742 PHO4YFR034C 939 nt14.72□□□□□ -0.05
NPR3P38742 INM2YDR287W 879 nt14.7□□□□□ -0.06
NPR3P38742 PST2YDR032C 597 nt14.65□□□□□ -0.06
NPR3P38742 MEP2YNL142W 1500 nt14.64□□□□□ -0.07
NPR3P38742 YPS1YLR120C 1710 nt14.56□□□□□ -0.08
NPR3P38742 YBL100CYBL100C 315 nt14.53□□□□□ -0.08
NPR3P38742 DCW1YKL046C 1350 nt14.47□□□□□ -0.09
NPR3P38742 YHR165W-AYHR165W-A 312 nt14.43□□□□□ -0.1
NPR3P38742 BDH2YAL061W 1254 nt14.43□□□□□ -0.1
NPR3P38742 YDR095CYDR095C 411 nt14.42□□□□□ -0.1
NPR3P38742 FUN26YAL022C 1554 nt14.36□□□□□ -0.11
NPR3P38742 WWM1YFL010C 636 nt14.34□□□□□ -0.11
NPR3P38742 BDF1YLR399C 2061 nt14.24□□□□□ -0.13
NPR3P38742 EMI2YDR516C 1503 nt14.21□□□□□ -0.13
NPR3P38742 TRM9YML014W 840 nt14.21□□□□□ -0.13
NPR3P38742 ALF1YNL148C 765 nt14.2□□□□□ -0.14
NPR3P38742 PTP1YDL230W 1008 nt14.19□□□□□ -0.14
NPR3P38742 SHU1YHL006C 453 nt14.18□□□□□ -0.14
NPR3P38742 CAC2YML102W 1407 nt14.15□□□□□ -0.14
NPR3P38742 RPP2AYOL039W 321 nt14.14□□□□□ -0.15
NPR3P38742 YAL037C-BYAL037C-B 975 nt14.13□□□□□ -0.15
NPR3P38742 LSM3YLR438C-A 270 nt14.13□□□□□ -0.15
NPR3P38742 CCT6YDR188W 1641 nt14.11□□□□□ -0.15
NPR3P38742 YBR220CYBR220C 1683 nt14.09□□□□□ -0.15
NPR3P38742 YDL221WYDL221W 552 nt14.08□□□□□ -0.16
NPR3P38742 YFL021C-AYFL021C-A 855 nt14.05□□□□□ -0.16
NPR3P38742 YGR021WYGR021W 873 nt14.05□□□□□ -0.16
NPR3P38742 HOM6YJR139C 1080 nt14.05□□□□□ -0.16
NPR3P38742 YMR090WYMR090W 684 nt14.05□□□□□ -0.16
NPR3P38742 TAT1YBR069C 1860 nt14.04□□□□□ -0.16
NPR3P38742 SIS1YNL007C 1059 nt14.02□□□□□ -0.17
NPR3P38742 MNP1YGL068W 585 nt13.97□□□□□ -0.17
NPR3P38742 SUF2tP(AGG)C 72 nt13.97□□□□□ -0.17
NPR3P38742 SUF10tP(AGG)N 72 nt13.97□□□□□ -0.17
NPR3P38742 SDH1YKL148C 1923 nt13.97□□□□□ -0.17
Retrieved 100 of 7,029 protein–RNA pairs in 7.8 ms