Protein–RNA interactions for Protein: P21827

SRM1, Guanine nucleotide exchange factor SRM1, yeastyeast

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRM1P21827 YML009W-BYML009W-B 477 nt23.84■■□□□ 1.41
SRM1P21827 NSR1YGR159C 1245 nt23.41■■□□□ 1.34
SRM1P21827 NOP1YDL014W 984 nt23.26■■□□□ 1.31
SRM1P21827 YKL036CYKL036C 393 nt21.72■■□□□ 1.07
SRM1P21827 MDJ1YFL016C 1536 nt20.56■□□□□ 0.88
SRM1P21827 Q0297Q0297 156 nt20.43■□□□□ 0.86
SRM1P21827 YJL027CYJL027C 417 nt20.35■□□□□ 0.85
SRM1P21827 SRX1YKL086W 384 nt20.32■□□□□ 0.84
SRM1P21827 SCS3YGL126W 1143 nt19.92■□□□□ 0.78
SRM1P21827 YCR051WYCR051W 669 nt19.34■□□□□ 0.69
SRM1P21827 YOL085CYOL085C 342 nt18.81■□□□□ 0.6
SRM1P21827 PKP1YIL042C 1185 nt18.53■□□□□ 0.56
SRM1P21827 RPP1BYDL130W 321 nt18.35■□□□□ 0.53
SRM1P21827 DBP2YNL112W 1641 nt18.29■□□□□ 0.52
SRM1P21827 TRN1tP(UGG)A 72 nt18.2■□□□□ 0.5
SRM1P21827 SUF9tP(UGG)F 72 nt18.2■□□□□ 0.5
SRM1P21827 SUF8tP(UGG)H 72 nt18.2■□□□□ 0.5
SRM1P21827 tP(UGG)LtP(UGG)L 72 nt18.2■□□□□ 0.5
SRM1P21827 SUF7tP(UGG)M 72 nt18.2■□□□□ 0.5
SRM1P21827 tP(UGG)N1tP(UGG)N1 72 nt18.2■□□□□ 0.5
SRM1P21827 tP(UGG)N2tP(UGG)N2 72 nt18.2■□□□□ 0.5
SRM1P21827 tP(UGG)O1tP(UGG)O1 72 nt18.2■□□□□ 0.5
SRM1P21827 SUF11tP(UGG)O2 72 nt18.2■□□□□ 0.5
SRM1P21827 CCC1YLR220W 969 nt18.08■□□□□ 0.48
SRM1P21827 SCJ1YMR214W 1134 nt17.94■□□□□ 0.46
SRM1P21827 ATS1YAL020C 1002 nt17.89■□□□□ 0.45
SRM1P21827 PET122YER153C 765 nt17.52■□□□□ 0.4
SRM1P21827 YBR190WYBR190W 312 nt17.43■□□□□ 0.38
SRM1P21827 SCR1SCR1 522 nt17.4■□□□□ 0.38
SRM1P21827 tP(UGG)O3tP(UGG)O3 72 nt17.33■□□□□ 0.36
SRM1P21827 RVS167YDR388W 1449 nt17.26■□□□□ 0.35
SRM1P21827 RTC3YHR087W 336 nt17.1■□□□□ 0.33
SRM1P21827 RRN5YLR141W 1092 nt17.04■□□□□ 0.32
SRM1P21827 RSB1YOR049C 1065 nt16.78■□□□□ 0.28
SRM1P21827 YDJ1YNL064C 1230 nt16.73■□□□□ 0.27
SRM1P21827 SHR5YOL110W 714 nt16.72■□□□□ 0.27
SRM1P21827 YER088W-BYER088W-B 147 nt16.71■□□□□ 0.27
SRM1P21827 PST2YDR032C 597 nt16.51■□□□□ 0.23
SRM1P21827 GAR1YHR089C 618 nt16.36■□□□□ 0.21
SRM1P21827 DEP1YAL013W 1218 nt16.2■□□□□ 0.18
SRM1P21827 URN1YPR152C 1398 nt16.1■□□□□ 0.17
SRM1P21827 YKL097CYKL097C 411 nt16.02■□□□□ 0.16
SRM1P21827 YNL208WYNL208W 600 nt15.94■□□□□ 0.14
SRM1P21827 RPN10YHR200W 807 nt15.9■□□□□ 0.14
SRM1P21827 TIR1YER011W 765 nt15.79■□□□□ 0.12
SRM1P21827 SHU1YHL006C 453 nt15.79■□□□□ 0.12
SRM1P21827 OPI9YLR338W 858 nt15.78■□□□□ 0.12
SRM1P21827 SAH1YER043C 1350 nt15.63■□□□□ 0.09
SRM1P21827 PUT4YOR348C 1884 nt15.62■□□□□ 0.09
SRM1P21827 SSA1YAL005C 1929 nt15.55■□□□□ 0.08
SRM1P21827 YAL037C-BYAL037C-B 975 nt15.5■□□□□ 0.07
SRM1P21827 ARE1YCR048W 1833 nt15.43■□□□□ 0.06
SRM1P21827 YJR018WYJR018W 363 nt15.37■□□□□ 0.05
SRM1P21827 SRB2YHR041C 633 nt15.35■□□□□ 0.05
SRM1P21827 PUN1YLR414C 792 nt15.32■□□□□ 0.04
SRM1P21827 YOR139CYOR139C 393 nt15.32■□□□□ 0.04
SRM1P21827 YHR049C-AYHR049C-A 297 nt15.24■□□□□ 0.03
SRM1P21827 YJR120WYJR120W 351 nt15.18■□□□□ 0.02
SRM1P21827 POA1YBR022W 534 nt15.18■□□□□ 0.02
SRM1P21827 WWM1YFL010C 636 nt15.15■□□□□ 0.02
SRM1P21827 NPL3YDR432W 1245 nt15.14■□□□□ 0.01
SRM1P21827 RPP2BYDR382W 333 nt15.13■□□□□ 0.01
SRM1P21827 YGR021WYGR021W 873 nt15.12■□□□□ 0.01
SRM1P21827 PTC2YER089C 1395 nt15.11■□□□□ 0.01
SRM1P21827 MNP1YGL068W 585 nt15.09■□□□□ 0.01
SRM1P21827 HOM6YJR139C 1080 nt15.09■□□□□ 0.01
SRM1P21827 BUD23YCR047C 828 nt14.93□□□□□ -0.02
SRM1P21827 YOL037CYOL037C 354 nt14.91□□□□□ -0.02
SRM1P21827 YFL021C-AYFL021C-A 855 nt14.88□□□□□ -0.03
SRM1P21827 BDH2YAL061W 1254 nt14.87□□□□□ -0.03
SRM1P21827 RKM5YLR137W 1104 nt14.87□□□□□ -0.03
SRM1P21827 NAB2YGL122C 1578 nt14.86□□□□□ -0.03
SRM1P21827 Q0182Q0182 405 nt14.85□□□□□ -0.03
SRM1P21827 SSA3YBL075C 1950 nt14.83□□□□□ -0.04
SRM1P21827 BSC6YOL137W 1494 nt14.77□□□□□ -0.04
SRM1P21827 INM2YDR287W 879 nt14.77□□□□□ -0.05
SRM1P21827 FPR4YLR449W 1179 nt14.74□□□□□ -0.05
SRM1P21827 DAL1YIR027C 1383 nt14.73□□□□□ -0.05
SRM1P21827 tM(CAU)CtM(CAU)C 72 nt14.71□□□□□ -0.05
SRM1P21827 IMT4tM(CAU)E 72 nt14.71□□□□□ -0.05
SRM1P21827 IMT3tM(CAU)J3 72 nt14.71□□□□□ -0.05
SRM1P21827 IMT1tM(CAU)O1 72 nt14.71□□□□□ -0.05
SRM1P21827 IMT2tM(CAU)P 72 nt14.71□□□□□ -0.05
SRM1P21827 LSM3YLR438C-A 270 nt14.71□□□□□ -0.05
SRM1P21827 YBL100CYBL100C 315 nt14.69□□□□□ -0.06
SRM1P21827 FIS1YIL065C 468 nt14.67□□□□□ -0.06
SRM1P21827 PHO4YFR034C 939 nt14.59□□□□□ -0.07
SRM1P21827 YLR281CYLR281C 468 nt14.55□□□□□ -0.08
SRM1P21827 TRM9YML014W 840 nt14.55□□□□□ -0.08
SRM1P21827 FUN26YAL022C 1554 nt14.53□□□□□ -0.08
SRM1P21827 PUS2YGL063W 1113 nt14.53□□□□□ -0.08
SRM1P21827 WHI5YOR083W 888 nt14.47□□□□□ -0.09
SRM1P21827 CCT6YDR188W 1641 nt14.37□□□□□ -0.11
SRM1P21827 MOT3YMR070W 1473 nt14.29□□□□□ -0.12
SRM1P21827 YLR154C-GYLR154C-G 150 nt14.26□□□□□ -0.13
SRM1P21827 ALF1YNL148C 765 nt14.26□□□□□ -0.13
SRM1P21827 SUF2tP(AGG)C 72 nt14.23□□□□□ -0.13
SRM1P21827 SUF10tP(AGG)N 72 nt14.23□□□□□ -0.13
SRM1P21827 DSK2YMR276W 1122 nt14.2□□□□□ -0.14
SRM1P21827 YPS1YLR120C 1710 nt14.19□□□□□ -0.14
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms