Protein–RNA interactions for Protein: P28791

SEC20, Protein transport protein SEC20, yeastyeast

Predictions only

Length 383 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC20P28791 YML009W-BYML009W-B 477 nt23.42■■□□□ 1.34
SEC20P28791 NSR1YGR159C 1245 nt23.11■■□□□ 1.29
SEC20P28791 NOP1YDL014W 984 nt22.91■■□□□ 1.26
SEC20P28791 YKL036CYKL036C 393 nt21.23■□□□□ 0.99
SEC20P28791 MDJ1YFL016C 1536 nt20.3■□□□□ 0.84
SEC20P28791 Q0297Q0297 156 nt20■□□□□ 0.79
SEC20P28791 SRX1YKL086W 384 nt19.92■□□□□ 0.78
SEC20P28791 YJL027CYJL027C 417 nt19.86■□□□□ 0.77
SEC20P28791 SCS3YGL126W 1143 nt19.33■□□□□ 0.68
SEC20P28791 YCR051WYCR051W 669 nt18.97■□□□□ 0.63
SEC20P28791 YOL085CYOL085C 342 nt18.31■□□□□ 0.52
SEC20P28791 PKP1YIL042C 1185 nt18.02■□□□□ 0.48
SEC20P28791 RPP1BYDL130W 321 nt17.97■□□□□ 0.47
SEC20P28791 DBP2YNL112W 1641 nt17.92■□□□□ 0.46
SEC20P28791 TRN1tP(UGG)A 72 nt17.88■□□□□ 0.45
SEC20P28791 SUF9tP(UGG)F 72 nt17.88■□□□□ 0.45
SEC20P28791 SUF8tP(UGG)H 72 nt17.88■□□□□ 0.45
SEC20P28791 tP(UGG)LtP(UGG)L 72 nt17.88■□□□□ 0.45
SEC20P28791 SUF7tP(UGG)M 72 nt17.88■□□□□ 0.45
SEC20P28791 tP(UGG)N1tP(UGG)N1 72 nt17.88■□□□□ 0.45
SEC20P28791 tP(UGG)N2tP(UGG)N2 72 nt17.88■□□□□ 0.45
SEC20P28791 tP(UGG)O1tP(UGG)O1 72 nt17.88■□□□□ 0.45
SEC20P28791 SUF11tP(UGG)O2 72 nt17.88■□□□□ 0.45
SEC20P28791 CCC1YLR220W 969 nt17.76■□□□□ 0.43
SEC20P28791 SCJ1YMR214W 1134 nt17.4■□□□□ 0.38
SEC20P28791 ATS1YAL020C 1002 nt17.34■□□□□ 0.37
SEC20P28791 YBR190WYBR190W 312 nt17.33■□□□□ 0.36
SEC20P28791 RVS167YDR388W 1449 nt17.16■□□□□ 0.34
SEC20P28791 SCR1SCR1 522 nt17.11■□□□□ 0.33
SEC20P28791 PET122YER153C 765 nt17.1■□□□□ 0.33
SEC20P28791 RTC3YHR087W 336 nt17.02■□□□□ 0.32
SEC20P28791 tP(UGG)O3tP(UGG)O3 72 nt16.98■□□□□ 0.31
SEC20P28791 RRN5YLR141W 1092 nt16.63■□□□□ 0.25
SEC20P28791 SHR5YOL110W 714 nt16.51■□□□□ 0.23
SEC20P28791 YDJ1YNL064C 1230 nt16.46■□□□□ 0.23
SEC20P28791 RSB1YOR049C 1065 nt16.42■□□□□ 0.22
SEC20P28791 YER088W-BYER088W-B 147 nt16.29■□□□□ 0.2
SEC20P28791 Q0182Q0182 405 nt16.2■□□□□ 0.18
SEC20P28791 GAR1YHR089C 618 nt16.06■□□□□ 0.16
SEC20P28791 PST2YDR032C 597 nt15.99■□□□□ 0.15
SEC20P28791 DEP1YAL013W 1218 nt15.95■□□□□ 0.14
SEC20P28791 URN1YPR152C 1398 nt15.93■□□□□ 0.14
SEC20P28791 RPN10YHR200W 807 nt15.87■□□□□ 0.13
SEC20P28791 YNL208WYNL208W 600 nt15.78■□□□□ 0.12
SEC20P28791 MOT3YMR070W 1473 nt15.69■□□□□ 0.1
SEC20P28791 OPI9YLR338W 858 nt15.65■□□□□ 0.1
SEC20P28791 YKL097CYKL097C 411 nt15.56■□□□□ 0.08
SEC20P28791 TIR1YER011W 765 nt15.52■□□□□ 0.08
SEC20P28791 PUT4YOR348C 1884 nt15.47■□□□□ 0.07
SEC20P28791 SAH1YER043C 1350 nt15.47■□□□□ 0.07
SEC20P28791 SHU1YHL006C 453 nt15.3■□□□□ 0.04
SEC20P28791 PUN1YLR414C 792 nt15.26■□□□□ 0.03
SEC20P28791 ARE1YCR048W 1833 nt15.25■□□□□ 0.03
SEC20P28791 YJR018WYJR018W 363 nt15.22■□□□□ 0.03
SEC20P28791 SSA1YAL005C 1929 nt15.2■□□□□ 0.02
SEC20P28791 SSA3YBL075C 1950 nt15.18■□□□□ 0.02
SEC20P28791 YHR049C-AYHR049C-A 297 nt15.15■□□□□ 0.02
SEC20P28791 RPP2BYDR382W 333 nt15.07■□□□□ 0
SEC20P28791 POA1YBR022W 534 nt15.07■□□□□ 0
SEC20P28791 YAL037C-BYAL037C-B 975 nt15.02■□□□□ -0
SEC20P28791 PTC2YER089C 1395 nt14.98□□□□□ -0.01
SEC20P28791 YGR021WYGR021W 873 nt14.91□□□□□ -0.02
SEC20P28791 BUD23YCR047C 828 nt14.87□□□□□ -0.03
SEC20P28791 SRB2YHR041C 633 nt14.86□□□□□ -0.03
SEC20P28791 YJR120WYJR120W 351 nt14.85□□□□□ -0.03
SEC20P28791 WWM1YFL010C 636 nt14.82□□□□□ -0.04
SEC20P28791 NAB2YGL122C 1578 nt14.78□□□□□ -0.04
SEC20P28791 NPL3YDR432W 1245 nt14.78□□□□□ -0.04
SEC20P28791 YOR139CYOR139C 393 nt14.77□□□□□ -0.05
SEC20P28791 HOM6YJR139C 1080 nt14.74□□□□□ -0.05
SEC20P28791 BSC6YOL137W 1494 nt14.71□□□□□ -0.05
SEC20P28791 INM2YDR287W 879 nt14.69□□□□□ -0.06
SEC20P28791 BDH2YAL061W 1254 nt14.69□□□□□ -0.06
SEC20P28791 MNP1YGL068W 585 nt14.68□□□□□ -0.06
SEC20P28791 YFL021C-AYFL021C-A 855 nt14.65□□□□□ -0.06
SEC20P28791 FPR4YLR449W 1179 nt14.65□□□□□ -0.06
SEC20P28791 DAL1YIR027C 1383 nt14.63□□□□□ -0.07
SEC20P28791 YOL037CYOL037C 354 nt14.62□□□□□ -0.07
SEC20P28791 YBL100CYBL100C 315 nt14.56□□□□□ -0.08
SEC20P28791 RKM5YLR137W 1104 nt14.55□□□□□ -0.08
SEC20P28791 LSM3YLR438C-A 270 nt14.55□□□□□ -0.08
SEC20P28791 FIS1YIL065C 468 nt14.52□□□□□ -0.09
SEC20P28791 PHO4YFR034C 939 nt14.47□□□□□ -0.09
SEC20P28791 TRM9YML014W 840 nt14.44□□□□□ -0.1
SEC20P28791 FUN26YAL022C 1554 nt14.36□□□□□ -0.11
SEC20P28791 ALF1YNL148C 765 nt14.23□□□□□ -0.13
SEC20P28791 CCT6YDR188W 1641 nt14.2□□□□□ -0.14
SEC20P28791 SUF2tP(AGG)C 72 nt14.2□□□□□ -0.14
SEC20P28791 SUF10tP(AGG)N 72 nt14.2□□□□□ -0.14
SEC20P28791 tM(CAU)CtM(CAU)C 72 nt14.19□□□□□ -0.14
SEC20P28791 IMT4tM(CAU)E 72 nt14.19□□□□□ -0.14
SEC20P28791 IMT3tM(CAU)J3 72 nt14.19□□□□□ -0.14
SEC20P28791 IMT1tM(CAU)O1 72 nt14.19□□□□□ -0.14
SEC20P28791 IMT2tM(CAU)P 72 nt14.19□□□□□ -0.14
SEC20P28791 YLR281CYLR281C 468 nt14.17□□□□□ -0.14
SEC20P28791 PUS2YGL063W 1113 nt14.13□□□□□ -0.15
SEC20P28791 WHI5YOR083W 888 nt14.12□□□□□ -0.15
SEC20P28791 YPS1YLR120C 1710 nt14.07□□□□□ -0.16
SEC20P28791 YDR095CYDR095C 411 nt14.04□□□□□ -0.16
SEC20P28791 YHR165W-AYHR165W-A 312 nt14.02□□□□□ -0.17
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms