RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W SGS1P35187 1447 aa17.31■□□□□ 0.36
SED1YDR077W INO80P53115 1489 aa17.14■□□□□ 0.33
SED1YDR077W TCB3Q03640 1545 aaKnown RBP16.97■□□□□ 0.31
SED1YDR077W MON2P48563 1636 aaPredicted RBP16.88■□□□□ 0.29
SED1YDR077W TY1B-DR4Q07793 1604 aa16.78■□□□□ 0.28
SED1YDR077W SPA2P23201 1466 aaKnown RBP16.54■□□□□ 0.24
SED1YDR077W SWR1Q05471 1514 aa16.47■□□□□ 0.23
SED1YDR077W SSN2P38931 1420 aa16.46■□□□□ 0.23
SED1YDR077W HSL1P34244 1518 aa16.43■□□□□ 0.22
SED1YDR077W SPT6P23615 1451 aaKnown RBP16.37■□□□□ 0.21
SED1YDR077W HIR3P47171 1648 aa16.11■□□□□ 0.17
SED1YDR077W DNA2P38859 1522 aa16.02■□□□□ 0.15
SED1YDR077W KOG1P38873 1557 aa16.01■□□□□ 0.15
SED1YDR077W XRN1P22147 1528 aaKnown RBP15.95■□□□□ 0.14
SED1YDR077W DRS1P32892 752 aaKnown RBP15.92■□□□□ 0.14
SED1YDR077W REV3P14284 1504 aa15.77■□□□□ 0.11
SED1YDR077W THO2P53552 1597 aaKnown RBP15.69■□□□□ 0.1
SED1YDR077W SIN3P22579 1536 aa15.67■□□□□ 0.1
SED1YDR077W BUD4P47136 1447 aa15.64■□□□□ 0.09
SED1YDR077W SSK2P53599 1579 aa15.56■□□□□ 0.08
SED1YDR077W ECM5Q03214 1411 aa15.52■□□□□ 0.08
SED1YDR077W TAF2P23255 1407 aa15.47■□□□□ 0.07
SED1YDR077W ATG2P53855 1592 aa15.45■□□□□ 0.06
SED1YDR077W ESP1Q03018 1630 aa15.41■□□□□ 0.06
SED1YDR077W MYO2P19524 1574 aaKnown RBP15.39■□□□□ 0.05
SED1YDR077W MDS3P53094 1487 aa15.39■□□□□ 0.05
SED1YDR077W PEP1P32319 1579 aa15.32■□□□□ 0.04
SED1YDR077W SKI3P17883 1432 aaKnown RBP15.3■□□□□ 0.04
SED1YDR077W YPK9Q12697 1472 aa15.2■□□□□ 0.02
SED1YDR077W MTC1P47018 478 aaKnown RBP15.07■□□□□ 0
SED1YDR077W SCC2Q04002 1493 aa15.07■□□□□ 0
SED1YDR077W POL1P13382 1468 aa15.06■□□□□ 0
SED1YDR077W RPO31P04051 1460 aa14.98□□□□□ -0.01
SED1YDR077W UFD4P33202 1483 aa14.95□□□□□ -0.02
SED1YDR077W STU1P38198 1513 aa14.95□□□□□ -0.02
SED1YDR077W RKR1Q04781 1562 aa14.94□□□□□ -0.02
SED1YDR077W BPT1P14772 1559 aa14.9□□□□□ -0.02
SED1YDR077W RSE1Q04693 1361 aaKnown RBP14.87□□□□□ -0.03
SED1YDR077W YCF1P39109 1515 aaKnown RBP14.87□□□□□ -0.03
SED1YDR077W TOP2P06786 1428 aaKnown RBP14.86□□□□□ -0.03
SED1YDR077W YOR1P53049 1477 aa14.86□□□□□ -0.03
SED1YDR077W TY2B-LR1P0C2J3 1770 aa14.82□□□□□ -0.04
SED1YDR077W TY2B-FP0CX63 1770 aa14.82□□□□□ -0.04
SED1YDR077W TY2B-GR2P0CX64 1770 aa14.82□□□□□ -0.04
SED1YDR077W TY2B-CP25384 1770 aa14.82□□□□□ -0.04
SED1YDR077W TY2B-DR2Q03494 1770 aa14.82□□□□□ -0.04
SED1YDR077W TY1B-DR1Q03855 1755 aa14.82□□□□□ -0.04
SED1YDR077W TY2B-DR3Q07791 1770 aaKnown RBP14.82□□□□□ -0.04
SED1YDR077W TY2B-OR1Q12113 1770 aa14.82□□□□□ -0.04
SED1YDR077W TY2B-DR1Q12472 1770 aa14.82□□□□□ -0.04
SED1YDR077W TY2B-OR2Q12501 1770 aa14.82□□□□□ -0.04
SED1YDR077W YTA7P40340 1379 aa14.8□□□□□ -0.04
SED1YDR077W CHD1P32657 1468 aa14.8□□□□□ -0.04
SED1YDR077W SMC4Q12267 1418 aa14.78□□□□□ -0.04
SED1YDR077W MYO4P32492 1471 aa14.73□□□□□ -0.05
SED1YDR077W MMS22Q06164 1454 aa14.72□□□□□ -0.05
SED1YDR077W TY1B-DR3Q99231 1755 aa14.71□□□□□ -0.05
SED1YDR077W TY2B-BQ12491 1770 aa14.68□□□□□ -0.06
SED1YDR077W CDC25P04821 1589 aa14.63□□□□□ -0.07
SED1YDR077W TY1B-BRQ12193 1756 aa14.62□□□□□ -0.07
SED1YDR077W TY1B-GR3Q12316 1755 aa14.62□□□□□ -0.07
SED1YDR077W TY1B-ORQ92393 1755 aa14.62□□□□□ -0.07
SED1YDR077W TY1B-HO13535 1793 aa14.59□□□□□ -0.07
SED1YDR077W TY1B-DR5P0C2I2 1755 aa14.59□□□□□ -0.07
SED1YDR077W TY1B-DR6P0C2I3 1755 aa14.59□□□□□ -0.07
SED1YDR077W TY1B-LR2P0C2I5 1755 aa14.59□□□□□ -0.07
SED1YDR077W TY1B-LR3P0C2I6 1755 aaKnown RBP14.59□□□□□ -0.07
SED1YDR077W TY1B-PR1P0C2I9 1755 aaKnown RBP14.59□□□□□ -0.07
SED1YDR077W TY1B-PR2P0C2J0 1756 aa14.59□□□□□ -0.07
SED1YDR077W TY1B-PR3P0C2J1 1755 aaKnown RBP14.59□□□□□ -0.07
SED1YDR077W TY1B-JR1P47098 1755 aa14.59□□□□□ -0.07
SED1YDR077W TY1B-ML2Q03434 1755 aaKnown RBP14.59□□□□□ -0.07
SED1YDR077W TY1B-ER1Q03612 1755 aa14.59□□□□□ -0.07
SED1YDR077W TY1B-ML1Q04711 1755 aaKnown RBP14.59□□□□□ -0.07
SED1YDR077W TY1B-GR2Q12269 1755 aa14.59□□□□□ -0.07
SED1YDR077W TY1B-OLQ12273 1755 aa14.59□□□□□ -0.07
SED1YDR077W TY1B-PLQ12414 1755 aaKnown RBP14.59□□□□□ -0.07
SED1YDR077W RQC2Q12532 1038 aaKnown RBP14.55□□□□□ -0.08
SED1YDR077W SPP41P38904 1435 aa14.54□□□□□ -0.08
SED1YDR077W PAN1P32521 1480 aa14.51□□□□□ -0.09
SED1YDR077W ESC1Q03661 1658 aaKnown RBP14.49□□□□□ -0.09
SED1YDR077W SNQ2P32568 1501 aaKnown RBP14.46□□□□□ -0.09
SED1YDR077W SAS10Q12136 610 aaPredicted RBP14.45□□□□□ -0.1
SED1YDR077W VTH1P40438 1549 aa14.45□□□□□ -0.1
SED1YDR077W VTH2P40890 1549 aa14.45□□□□□ -0.1
SED1YDR077W TSC11P40061 1430 aa14.42□□□□□ -0.1
SED1YDR077W MLP2P40457 1679 aa14.41□□□□□ -0.1
SED1YDR077W STH1P32597 1359 aa14.39□□□□□ -0.11
SED1YDR077W TRM732Q03496 1420 aa14.36□□□□□ -0.11
SED1YDR077W TAF7Q05021 590 aa14.36□□□□□ -0.11
SED1YDR077W RPA190P10964 1664 aaKnown RBP14.36□□□□□ -0.11
SED1YDR077W DNF1P32660 1571 aa14.35□□□□□ -0.11
SED1YDR077W TY1B-JR2P47100 1755 aaKnown RBP14.34□□□□□ -0.11
SED1YDR077W TY1B-ER2Q03619 1755 aa14.34□□□□□ -0.11
SED1YDR077W TY1B-MR1Q04214 1755 aa14.34□□□□□ -0.11
SED1YDR077W TY1B-MR2Q04670 1755 aaKnown RBP14.34□□□□□ -0.11
SED1YDR077W TY1B-LR1Q12088 1755 aaKnown RBP14.34□□□□□ -0.11
SED1YDR077W TY1B-NL1Q12112 1755 aa14.34□□□□□ -0.11
SED1YDR077W TY1B-GR1Q12141 1755 aa14.34□□□□□ -0.11
SED1YDR077W TY1B-BLQ12490 1755 aa14.34□□□□□ -0.11
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms