Protein–RNA interactions for Protein: P08539

GPA1, Guanine nucleotide-binding protein alpha-1 subunit, yeastyeast

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GPA1P08539 NSR1YGR159C 1245 nt22.77■■□□□ 1.24
GPA1P08539 YML009W-BYML009W-B 477 nt22.66■■□□□ 1.22
GPA1P08539 NOP1YDL014W 984 nt21.82■■□□□ 1.08
GPA1P08539 MDJ1YFL016C 1536 nt20.6■□□□□ 0.89
GPA1P08539 YKL036CYKL036C 393 nt19.89■□□□□ 0.77
GPA1P08539 SRX1YKL086W 384 nt19.12■□□□□ 0.65
GPA1P08539 Q0297Q0297 156 nt19.06■□□□□ 0.64
GPA1P08539 YJL027CYJL027C 417 nt18.91■□□□□ 0.62
GPA1P08539 YCR051WYCR051W 669 nt18.13■□□□□ 0.49
GPA1P08539 DBP2YNL112W 1641 nt18.12■□□□□ 0.49
GPA1P08539 SCS3YGL126W 1143 nt17.99■□□□□ 0.47
GPA1P08539 YBR190WYBR190W 312 nt17.58■□□□□ 0.4
GPA1P08539 TRN1tP(UGG)A 72 nt17.5■□□□□ 0.39
GPA1P08539 SUF9tP(UGG)F 72 nt17.5■□□□□ 0.39
GPA1P08539 SUF8tP(UGG)H 72 nt17.5■□□□□ 0.39
GPA1P08539 tP(UGG)LtP(UGG)L 72 nt17.5■□□□□ 0.39
GPA1P08539 SUF7tP(UGG)M 72 nt17.5■□□□□ 0.39
GPA1P08539 tP(UGG)N1tP(UGG)N1 72 nt17.5■□□□□ 0.39
GPA1P08539 tP(UGG)N2tP(UGG)N2 72 nt17.5■□□□□ 0.39
GPA1P08539 tP(UGG)O1tP(UGG)O1 72 nt17.5■□□□□ 0.39
GPA1P08539 SUF11tP(UGG)O2 72 nt17.5■□□□□ 0.39
GPA1P08539 CCC1YLR220W 969 nt17.35■□□□□ 0.37
GPA1P08539 YOL085CYOL085C 342 nt17.29■□□□□ 0.36
GPA1P08539 RTC3YHR087W 336 nt17.18■□□□□ 0.34
GPA1P08539 RPP1BYDL130W 321 nt17.1■□□□□ 0.33
GPA1P08539 PKP1YIL042C 1185 nt17.1■□□□□ 0.33
GPA1P08539 RVS167YDR388W 1449 nt16.82■□□□□ 0.28
GPA1P08539 SCJ1YMR214W 1134 nt16.82■□□□□ 0.28
GPA1P08539 tP(UGG)O3tP(UGG)O3 72 nt16.46■□□□□ 0.23
GPA1P08539 PET122YER153C 765 nt16.42■□□□□ 0.22
GPA1P08539 PUT4YOR348C 1884 nt16.27■□□□□ 0.19
GPA1P08539 SHR5YOL110W 714 nt16.21■□□□□ 0.19
GPA1P08539 SCR1SCR1 522 nt16.06■□□□□ 0.16
GPA1P08539 ATS1YAL020C 1002 nt15.99■□□□□ 0.15
GPA1P08539 URN1YPR152C 1398 nt15.99■□□□□ 0.15
GPA1P08539 SSA3YBL075C 1950 nt15.93■□□□□ 0.14
GPA1P08539 DEP1YAL013W 1218 nt15.93■□□□□ 0.14
GPA1P08539 RRN5YLR141W 1092 nt15.92■□□□□ 0.14
GPA1P08539 ARE1YCR048W 1833 nt15.89■□□□□ 0.13
GPA1P08539 YDJ1YNL064C 1230 nt15.88■□□□□ 0.13
GPA1P08539 SAH1YER043C 1350 nt15.83■□□□□ 0.12
GPA1P08539 OPI9YLR338W 858 nt15.8■□□□□ 0.12
GPA1P08539 POA1YBR022W 534 nt15.74■□□□□ 0.11
GPA1P08539 YHR049C-AYHR049C-A 297 nt15.65■□□□□ 0.1
GPA1P08539 GAR1YHR089C 618 nt15.63■□□□□ 0.09
GPA1P08539 YER088W-BYER088W-B 147 nt15.6■□□□□ 0.09
GPA1P08539 RPN10YHR200W 807 nt15.57■□□□□ 0.08
GPA1P08539 YNL208WYNL208W 600 nt15.57■□□□□ 0.08
GPA1P08539 RSB1YOR049C 1065 nt15.46■□□□□ 0.07
GPA1P08539 BSC6YOL137W 1494 nt15.45■□□□□ 0.06
GPA1P08539 PUN1YLR414C 792 nt15.3■□□□□ 0.04
GPA1P08539 BUD23YCR047C 828 nt15.26■□□□□ 0.03
GPA1P08539 PTC2YER089C 1395 nt15.24■□□□□ 0.03
GPA1P08539 YJR018WYJR018W 363 nt15.22■□□□□ 0.03
GPA1P08539 TIR1YER011W 765 nt15.11■□□□□ 0.01
GPA1P08539 SSA1YAL005C 1929 nt15.04■□□□□ -0
GPA1P08539 NAB2YGL122C 1578 nt15.03■□□□□ -0
GPA1P08539 SPT5YML010W 3192 nt15.01□□□□□ -0.01
GPA1P08539 YJR120WYJR120W 351 nt15.01□□□□□ -0.01
GPA1P08539 PST2YDR032C 597 nt14.88□□□□□ -0.03
GPA1P08539 FIS1YIL065C 468 nt14.85□□□□□ -0.03
GPA1P08539 SRB2YHR041C 633 nt14.82□□□□□ -0.04
GPA1P08539 DAL1YIR027C 1383 nt14.78□□□□□ -0.04
GPA1P08539 FPR4YLR449W 1179 nt14.77□□□□□ -0.05
GPA1P08539 RPP2BYDR382W 333 nt14.76□□□□□ -0.05
GPA1P08539 INM2YDR287W 879 nt14.67□□□□□ -0.06
GPA1P08539 PHO4YFR034C 939 nt14.67□□□□□ -0.06
GPA1P08539 SSA4YER103W 1929 nt14.56□□□□□ -0.08
GPA1P08539 YBL100CYBL100C 315 nt14.52□□□□□ -0.09
GPA1P08539 MEP2YNL142W 1500 nt14.51□□□□□ -0.09
GPA1P08539 YPS1YLR120C 1710 nt14.5□□□□□ -0.09
GPA1P08539 BDH2YAL061W 1254 nt14.46□□□□□ -0.09
GPA1P08539 WWM1YFL010C 636 nt14.43□□□□□ -0.1
GPA1P08539 SHU1YHL006C 453 nt14.37□□□□□ -0.11
GPA1P08539 FUN26YAL022C 1554 nt14.35□□□□□ -0.11
GPA1P08539 YDR095CYDR095C 411 nt14.35□□□□□ -0.11
GPA1P08539 DCW1YKL046C 1350 nt14.34□□□□□ -0.11
GPA1P08539 YHR165W-AYHR165W-A 312 nt14.34□□□□□ -0.11
GPA1P08539 YAL037C-BYAL037C-B 975 nt14.29□□□□□ -0.12
GPA1P08539 TRM9YML014W 840 nt14.23□□□□□ -0.13
GPA1P08539 LSM3YLR438C-A 270 nt14.19□□□□□ -0.14
GPA1P08539 HOM6YJR139C 1080 nt14.16□□□□□ -0.14
GPA1P08539 ALF1YNL148C 765 nt14.15□□□□□ -0.14
GPA1P08539 YGR021WYGR021W 873 nt14.14□□□□□ -0.15
GPA1P08539 PTP1YDL230W 1008 nt14.13□□□□□ -0.15
GPA1P08539 CCT6YDR188W 1641 nt14.12□□□□□ -0.15
GPA1P08539 YFL021C-AYFL021C-A 855 nt14.12□□□□□ -0.15
GPA1P08539 EMI2YDR516C 1503 nt14.1□□□□□ -0.15
GPA1P08539 CAC2YML102W 1407 nt14.08□□□□□ -0.15
GPA1P08539 MNP1YGL068W 585 nt14.08□□□□□ -0.16
GPA1P08539 YKL097CYKL097C 411 nt14.07□□□□□ -0.16
GPA1P08539 RPP2AYOL039W 321 nt14.07□□□□□ -0.16
GPA1P08539 BDF1YLR399C 2061 nt14.06□□□□□ -0.16
GPA1P08539 SIS1YNL007C 1059 nt14.01□□□□□ -0.17
GPA1P08539 YDL221WYDL221W 552 nt13.96□□□□□ -0.17
GPA1P08539 YBR220CYBR220C 1683 nt13.95□□□□□ -0.18
GPA1P08539 SUF2tP(AGG)C 72 nt13.95□□□□□ -0.18
GPA1P08539 SUF10tP(AGG)N 72 nt13.95□□□□□ -0.18
GPA1P08539 RKM5YLR137W 1104 nt13.93□□□□□ -0.18
GPA1P08539 YMR090WYMR090W 684 nt13.92□□□□□ -0.18
Retrieved 100 of 7,029 protein–RNA pairs in 12 ms