RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 KIN1P13185 1064 aa17.53■□□□□ 0.4
SCR1SCR1 MOT2P34909 587 aaKnown RBP17.53■□□□□ 0.4
SCR1SCR1 PPM2Q08282 695 aa17.53■□□□□ 0.4
SCR1SCR1 KEL3Q08979 651 aaPredicted RBP17.53■□□□□ 0.4
SCR1SCR1 YMR147WP40218 223 aaKnown RBP17.52■□□□□ 0.4
SCR1SCR1 YPL260WQ08977 551 aa17.51■□□□□ 0.39
SCR1SCR1 KTR1P27810 393 aaKnown RBP17.49■□□□□ 0.39
SCR1SCR1 NCS6P53088 359 aa17.49■□□□□ 0.39
SCR1SCR1 MRPS35P53292 345 aa17.49■□□□□ 0.39
SCR1SCR1 JIP4Q03361 876 aa17.49■□□□□ 0.39
SCR1SCR1 KAR5Q04746 504 aa17.49■□□□□ 0.39
SCR1SCR1 YDL124WQ07551 312 aaKnown RBP17.49■□□□□ 0.39
SCR1SCR1 MPH3P0CE00 602 aa17.48■□□□□ 0.39
SCR1SCR1 OCT1P35999 772 aa17.48■□□□□ 0.39
SCR1SCR1 RMD1Q03441 430 aa17.48■□□□□ 0.39
SCR1SCR1 NKP2Q06162 153 aa17.48■□□□□ 0.39
SCR1SCR1 BBC1P47068 1157 aa17.47■□□□□ 0.39
SCR1SCR1 TAH18Q12181 623 aa17.47■□□□□ 0.39
SCR1SCR1 OPI1P21957 404 aa17.46■□□□□ 0.39
SCR1SCR1 CST26P38226 397 aa17.46■□□□□ 0.39
SCR1SCR1 ACA1P39970 489 aa17.46■□□□□ 0.39
SCR1SCR1 PIB2P53191 635 aa17.46■□□□□ 0.39
SCR1SCR1 PEX29Q03370 554 aa17.46■□□□□ 0.39
SCR1SCR1 STM1P39015 273 aaKnown RBP17.45■□□□□ 0.38
SCR1SCR1 SPR3P41901 512 aa17.45■□□□□ 0.38
SCR1SCR1 NET1P47035 1189 aa17.45■□□□□ 0.38
SCR1SCR1 TUB2P02557 457 aaKnown RBP17.44■□□□□ 0.38
SCR1SCR1 RRP8P38961 392 aaKnown RBP17.44■□□□□ 0.38
SCR1SCR1 SUB2Q07478 446 aaKnown RBP17.44■□□□□ 0.38
SCR1SCR1 PRE8P23639 250 aa17.43■□□□□ 0.38
SCR1SCR1 ASH1P34233 588 aa17.43■□□□□ 0.38
SCR1SCR1 RTS1P38903 757 aa17.43■□□□□ 0.38
SCR1SCR1 SLN1P39928 1220 aaPredicted RBP17.43■□□□□ 0.38
SCR1SCR1 PKH3Q03306 898 aaPredicted RBP17.43■□□□□ 0.38
SCR1SCR1 VAB2P40003 282 aa17.42■□□□□ 0.38
SCR1SCR1 LYS14P40971 790 aa17.42■□□□□ 0.38
SCR1SCR1 RAD50P12753 1312 aa17.42■□□□□ 0.38
SCR1SCR1 MRD1Q06106 887 aaKnown RBP17.41■□□□□ 0.38
SCR1SCR1 SRM1P21827 482 aa17.4■□□□□ 0.38
SCR1SCR1 SPT21P35209 758 aa17.4■□□□□ 0.38
SCR1SCR1 MET1P36150 593 aa17.4■□□□□ 0.38
SCR1SCR1 MCD4P36051 919 aa17.38■□□□□ 0.37
SCR1SCR1 LAM4P38800 1345 aa17.38■□□□□ 0.37
SCR1SCR1 ERG12P07277 443 aa17.37■□□□□ 0.37
SCR1SCR1 VAS1P07806 1104 aaKnown RBP17.37■□□□□ 0.37
SCR1SCR1 YLR225CQ05948 407 aaKnown RBP17.37■□□□□ 0.37
SCR1SCR1 SGD1Q06132 899 aa17.37■□□□□ 0.37
SCR1SCR1 LAP2Q10740 671 aa17.37■□□□□ 0.37
SCR1SCR1 RAD61Q99359 647 aa17.37■□□□□ 0.37
SCR1SCR1 COQ1P18900 473 aa17.36■□□□□ 0.37
SCR1SCR1 ERG7P38604 731 aa17.35■□□□□ 0.37
SCR1SCR1 SKG3Q06315 1026 aa17.35■□□□□ 0.37
SCR1SCR1 RIM20Q12033 661 aa17.35■□□□□ 0.37
SCR1SCR1 CFT2Q12102 859 aaPredicted RBP17.35■□□□□ 0.37
SCR1SCR1 SSF2Q12153 453 aaPredicted RBP17.35■□□□□ 0.37
SCR1SCR1 VID27P40157 782 aa17.34■□□□□ 0.37
SCR1SCR1 PER1P25625 357 aa17.33■□□□□ 0.36
SCR1SCR1 PES4P39684 611 aa17.33■□□□□ 0.36
SCR1SCR1 TIF4631P39935 952 aaKnown RBP17.33■□□□□ 0.36
SCR1SCR1 TY3A-GQ12173 290 aa17.33■□□□□ 0.36
SCR1SCR1 TY3A-IQ99219 290 aa17.33■□□□□ 0.36
SCR1SCR1 TPM1P17536 199 aaKnown RBP17.32■□□□□ 0.36
SCR1SCR1 YDJ1P25491 409 aaKnown RBP17.32■□□□□ 0.36
SCR1SCR1 FBP1P09201 348 aa17.31■□□□□ 0.36
SCR1SCR1 YHL050CP38721 697 aa17.31■□□□□ 0.36
SCR1SCR1 FPR4Q06205 392 aaPredicted RBP17.31■□□□□ 0.36
SCR1SCR1 SPB4P25808 606 aaPredicted RBP17.3■□□□□ 0.36
SCR1SCR1 CDC60P26637 1090 aaKnown RBP17.3■□□□□ 0.36
SCR1SCR1 VPS8P39702 1274 aa17.3■□□□□ 0.36
SCR1SCR1 RPS15Q01855 142 aaKnown RBP17.3■□□□□ 0.36
SCR1SCR1 IXR1P33417 597 aa17.29■□□□□ 0.36
SCR1SCR1 SKI2P35207 1287 aaKnown RBP RIP-Chip data17.29■□□□□ 0.36not detected
SCR1SCR1 UFD2P54860 961 aa17.29■□□□□ 0.36
SCR1SCR1 SDH2P21801 266 aa17.28■□□□□ 0.36
SCR1SCR1 YJL007CP47080 104 aa17.28■□□□□ 0.36
SCR1SCR1 ATG1P53104 897 aa17.28■□□□□ 0.36
SCR1SCR1 AAP1P37898 856 aaKnown RBP17.27■□□□□ 0.36
SCR1SCR1 SOL4P53315 255 aa17.27■□□□□ 0.36
SCR1SCR1 CHO2P05374 869 aaKnown RBP17.26■□□□□ 0.35
SCR1SCR1 DIT2P21595 489 aa17.26■□□□□ 0.35
SCR1SCR1 TUS1Q06412 1307 aa17.25■□□□□ 0.35
SCR1SCR1 KRS1P15180 591 aaKnown RBP17.25■□□□□ 0.35
SCR1SCR1 YAF9P53930 226 aa17.25■□□□□ 0.35
SCR1SCR1 YML037CQ03703 340 aa17.25■□□□□ 0.35
SCR1SCR1 SPN1Q06505 410 aaPredicted RBP17.25■□□□□ 0.35
SCR1SCR1 CRG1P38892 291 aaRIP-Chip data17.24■□□□□ 0.35not detected
SCR1SCR1 CHS3P29465 1165 aa17.23■□□□□ 0.35
SCR1SCR1 UBX5Q06682 500 aa17.23■□□□□ 0.35
SCR1SCR1 MYO3P36006 1272 aa17.22■□□□□ 0.35
SCR1SCR1 SRS2P12954 1174 aa17.21■□□□□ 0.35
SCR1SCR1 PKC1P24583 1151 aa17.21■□□□□ 0.35
SCR1SCR1 ANP1P32629 500 aa17.21■□□□□ 0.35
SCR1SCR1 GPB2P39717 880 aa17.21■□□□□ 0.35
SCR1SCR1 VMA2P16140 517 aaKnown RBP17.2■□□□□ 0.34
SCR1SCR1 RIT1P23796 513 aa17.2■□□□□ 0.34
SCR1SCR1 YKR018CP36114 725 aa17.2■□□□□ 0.34
SCR1SCR1 CLF1Q12309 687 aaPredicted RBP17.2■□□□□ 0.34
SCR1SCR1 PSF2P40359 213 aa17.19■□□□□ 0.34
SCR1SCR1 PRO3P32263 286 aaKnown RBP17.18■□□□□ 0.34
SCR1SCR1 BRN1P38170 754 aa17.18■□□□□ 0.34
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms