Protein–RNA interactions for Protein: Q06505

SPN1, Transcription factor SPN1, yeastyeast

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPN1Q06505 YML009W-BYML009W-B 477 nt23.87■■□□□ 1.41
SPN1Q06505 NSR1YGR159C 1245 nt23.66■■□□□ 1.38
SPN1Q06505 NOP1YDL014W 984 nt23.19■■□□□ 1.3
SPN1Q06505 YKL036CYKL036C 393 nt21.44■■□□□ 1.02
SPN1Q06505 MDJ1YFL016C 1536 nt21■□□□□ 0.95
SPN1Q06505 Q0297Q0297 156 nt20.3■□□□□ 0.84
SPN1Q06505 SRX1YKL086W 384 nt20.27■□□□□ 0.84
SPN1Q06505 YJL027CYJL027C 417 nt20.04■□□□□ 0.8
SPN1Q06505 SCS3YGL126W 1143 nt19.53■□□□□ 0.72
SPN1Q06505 YCR051WYCR051W 669 nt19.27■□□□□ 0.68
SPN1Q06505 DBP2YNL112W 1641 nt18.58■□□□□ 0.56
SPN1Q06505 YOL085CYOL085C 342 nt18.57■□□□□ 0.56
SPN1Q06505 PKP1YIL042C 1185 nt18.32■□□□□ 0.52
SPN1Q06505 TRN1tP(UGG)A 72 nt18.3■□□□□ 0.52
SPN1Q06505 SUF9tP(UGG)F 72 nt18.3■□□□□ 0.52
SPN1Q06505 SUF8tP(UGG)H 72 nt18.3■□□□□ 0.52
SPN1Q06505 tP(UGG)LtP(UGG)L 72 nt18.3■□□□□ 0.52
SPN1Q06505 SUF7tP(UGG)M 72 nt18.3■□□□□ 0.52
SPN1Q06505 tP(UGG)N1tP(UGG)N1 72 nt18.3■□□□□ 0.52
SPN1Q06505 tP(UGG)N2tP(UGG)N2 72 nt18.3■□□□□ 0.52
SPN1Q06505 tP(UGG)O1tP(UGG)O1 72 nt18.3■□□□□ 0.52
SPN1Q06505 SUF11tP(UGG)O2 72 nt18.3■□□□□ 0.52
SPN1Q06505 RPP1BYDL130W 321 nt18.23■□□□□ 0.51
SPN1Q06505 CCC1YLR220W 969 nt18.17■□□□□ 0.5
SPN1Q06505 YBR190WYBR190W 312 nt17.87■□□□□ 0.45
SPN1Q06505 RTC3YHR087W 336 nt17.52■□□□□ 0.4
SPN1Q06505 RVS167YDR388W 1449 nt17.47■□□□□ 0.39
SPN1Q06505 ATS1YAL020C 1002 nt17.47■□□□□ 0.39
SPN1Q06505 PET122YER153C 765 nt17.43■□□□□ 0.38
SPN1Q06505 SCJ1YMR214W 1134 nt17.39■□□□□ 0.37
SPN1Q06505 tP(UGG)O3tP(UGG)O3 72 nt17.34■□□□□ 0.37
SPN1Q06505 SCR1SCR1 522 nt17.25■□□□□ 0.35
SPN1Q06505 RRN5YLR141W 1092 nt16.95■□□□□ 0.3
SPN1Q06505 SHR5YOL110W 714 nt16.87■□□□□ 0.29
SPN1Q06505 YDJ1YNL064C 1230 nt16.75■□□□□ 0.27
SPN1Q06505 RSB1YOR049C 1065 nt16.6■□□□□ 0.25
SPN1Q06505 YER088W-BYER088W-B 147 nt16.59■□□□□ 0.25
SPN1Q06505 DEP1YAL013W 1218 nt16.43■□□□□ 0.22
SPN1Q06505 GAR1YHR089C 618 nt16.41■□□□□ 0.22
SPN1Q06505 URN1YPR152C 1398 nt16.4■□□□□ 0.22
SPN1Q06505 PUT4YOR348C 1884 nt16.2■□□□□ 0.18
SPN1Q06505 PST2YDR032C 597 nt16.17■□□□□ 0.18
SPN1Q06505 RPN10YHR200W 807 nt16.15■□□□□ 0.18
SPN1Q06505 OPI9YLR338W 858 nt16.14■□□□□ 0.17
SPN1Q06505 YNL208WYNL208W 600 nt16.14■□□□□ 0.17
SPN1Q06505 SAH1YER043C 1350 nt16.04■□□□□ 0.16
SPN1Q06505 ARE1YCR048W 1833 nt15.92■□□□□ 0.14
SPN1Q06505 TIR1YER011W 765 nt15.85■□□□□ 0.13
SPN1Q06505 YHR049C-AYHR049C-A 297 nt15.73■□□□□ 0.11
SPN1Q06505 POA1YBR022W 534 nt15.73■□□□□ 0.11
SPN1Q06505 PUN1YLR414C 792 nt15.67■□□□□ 0.1
SPN1Q06505 SSA1YAL005C 1929 nt15.65■□□□□ 0.1
SPN1Q06505 YJR018WYJR018W 363 nt15.65■□□□□ 0.1
SPN1Q06505 YKL097CYKL097C 411 nt15.56■□□□□ 0.08
SPN1Q06505 SHU1YHL006C 453 nt15.52■□□□□ 0.08
SPN1Q06505 PTC2YER089C 1395 nt15.49■□□□□ 0.07
SPN1Q06505 BUD23YCR047C 828 nt15.41■□□□□ 0.06
SPN1Q06505 SRB2YHR041C 633 nt15.39■□□□□ 0.05
SPN1Q06505 YJR120WYJR120W 351 nt15.39■□□□□ 0.05
SPN1Q06505 BSC6YOL137W 1494 nt15.36■□□□□ 0.05
SPN1Q06505 SSA3YBL075C 1950 nt15.36■□□□□ 0.05
SPN1Q06505 RPP2BYDR382W 333 nt15.34■□□□□ 0.05
SPN1Q06505 YAL037C-BYAL037C-B 975 nt15.31■□□□□ 0.04
SPN1Q06505 NAB2YGL122C 1578 nt15.27■□□□□ 0.03
SPN1Q06505 WWM1YFL010C 636 nt15.17■□□□□ 0.02
SPN1Q06505 FPR4YLR449W 1179 nt15.09■□□□□ 0.01
SPN1Q06505 DAL1YIR027C 1383 nt15.08■□□□□ 0
SPN1Q06505 INM2YDR287W 879 nt15.07■□□□□ 0
SPN1Q06505 YGR021WYGR021W 873 nt15.06■□□□□ 0
SPN1Q06505 FIS1YIL065C 468 nt15.04■□□□□ -0
SPN1Q06505 BDH2YAL061W 1254 nt15.03■□□□□ -0
SPN1Q06505 HOM6YJR139C 1080 nt15.01□□□□□ -0.01
SPN1Q06505 MNP1YGL068W 585 nt14.97□□□□□ -0.01
SPN1Q06505 YBL100CYBL100C 315 nt14.94□□□□□ -0.02
SPN1Q06505 PHO4YFR034C 939 nt14.93□□□□□ -0.02
SPN1Q06505 YOR139CYOR139C 393 nt14.93□□□□□ -0.02
SPN1Q06505 YFL021C-AYFL021C-A 855 nt14.9□□□□□ -0.02
SPN1Q06505 LSM3YLR438C-A 270 nt14.83□□□□□ -0.04
SPN1Q06505 NPL3YDR432W 1245 nt14.81□□□□□ -0.04
SPN1Q06505 RKM5YLR137W 1104 nt14.79□□□□□ -0.04
SPN1Q06505 FUN26YAL022C 1554 nt14.77□□□□□ -0.04
SPN1Q06505 TRM9YML014W 840 nt14.76□□□□□ -0.05
SPN1Q06505 YOL037CYOL037C 354 nt14.69□□□□□ -0.06
SPN1Q06505 YPS1YLR120C 1710 nt14.62□□□□□ -0.07
SPN1Q06505 CCT6YDR188W 1641 nt14.58□□□□□ -0.08
SPN1Q06505 ALF1YNL148C 765 nt14.56□□□□□ -0.08
SPN1Q06505 SPT5YML010W 3192 nt14.53□□□□□ -0.08
SPN1Q06505 YDR095CYDR095C 411 nt14.53□□□□□ -0.08
SPN1Q06505 YHR165W-AYHR165W-A 312 nt14.48□□□□□ -0.09
SPN1Q06505 SUF2tP(AGG)C 72 nt14.46□□□□□ -0.09
SPN1Q06505 SUF10tP(AGG)N 72 nt14.46□□□□□ -0.09
SPN1Q06505 MEP2YNL142W 1500 nt14.41□□□□□ -0.1
SPN1Q06505 tM(CAU)CtM(CAU)C 72 nt14.36□□□□□ -0.11
SPN1Q06505 IMT4tM(CAU)E 72 nt14.36□□□□□ -0.11
SPN1Q06505 IMT3tM(CAU)J3 72 nt14.36□□□□□ -0.11
SPN1Q06505 IMT1tM(CAU)O1 72 nt14.36□□□□□ -0.11
SPN1Q06505 IMT2tM(CAU)P 72 nt14.36□□□□□ -0.11
SPN1Q06505 YLR281CYLR281C 468 nt14.36□□□□□ -0.11
SPN1Q06505 WHI5YOR083W 888 nt14.34□□□□□ -0.11
SPN1Q06505 SIS1YNL007C 1059 nt14.31□□□□□ -0.12
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms