Protein–RNA interactions for Protein: P35207

SKI2, Antiviral helicase SKI2, yeastyeast

Known RBP RIP-Chip data

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKI2P35207 YML009W-BYML009W-B 477 nt23.96■■□□□ 1.43
SKI2P35207 NSR1YGR159C 1245 nt23.71■■□□□ 1.39
SKI2P35207 NOP1YDL014W 984 nt23.25■■□□□ 1.31
SKI2P35207 YKL036CYKL036C 393 nt21.48■■□□□ 1.03
SKI2P35207 MDJ1YFL016C 1536 nt21.1■□□□□ 0.97
SKI2P35207 Q0297Q0297 156 nt20.33■□□□□ 0.85
SKI2P35207 SRX1YKL086W 384 nt20.3■□□□□ 0.84
SKI2P35207 YJL027CYJL027C 417 nt20.08■□□□□ 0.81
SKI2P35207 SCS3YGL126W 1143 nt19.57■□□□□ 0.72 RIP-Chip
SKI2P35207 YCR051WYCR051W 669 nt19.32■□□□□ 0.68
SKI2P35207 DBP2YNL112W 1641 nt18.63■□□□□ 0.57
SKI2P35207 YOL085CYOL085C 342 nt18.6■□□□□ 0.57
SKI2P35207 PKP1YIL042C 1185 nt18.37■□□□□ 0.53
SKI2P35207 TRN1tP(UGG)A 72 nt18.35■□□□□ 0.53
SKI2P35207 SUF9tP(UGG)F 72 nt18.35■□□□□ 0.53
SKI2P35207 SUF8tP(UGG)H 72 nt18.35■□□□□ 0.53
SKI2P35207 tP(UGG)LtP(UGG)L 72 nt18.35■□□□□ 0.53
SKI2P35207 SUF7tP(UGG)M 72 nt18.35■□□□□ 0.53
SKI2P35207 tP(UGG)N1tP(UGG)N1 72 nt18.35■□□□□ 0.53
SKI2P35207 tP(UGG)N2tP(UGG)N2 72 nt18.35■□□□□ 0.53
SKI2P35207 tP(UGG)O1tP(UGG)O1 72 nt18.35■□□□□ 0.53
SKI2P35207 SUF11tP(UGG)O2 72 nt18.35■□□□□ 0.53
SKI2P35207 RPP1BYDL130W 321 nt18.27■□□□□ 0.52
SKI2P35207 CCC1YLR220W 969 nt18.23■□□□□ 0.51
SKI2P35207 YBR190WYBR190W 312 nt17.94■□□□□ 0.46
SKI2P35207 RTC3YHR087W 336 nt17.61■□□□□ 0.41
SKI2P35207 RVS167YDR388W 1449 nt17.56■□□□□ 0.4
SKI2P35207 ATS1YAL020C 1002 nt17.49■□□□□ 0.39
SKI2P35207 PET122YER153C 765 nt17.48■□□□□ 0.39
SKI2P35207 SCJ1YMR214W 1134 nt17.47■□□□□ 0.39
SKI2P35207 tP(UGG)O3tP(UGG)O3 72 nt17.38■□□□□ 0.37
SKI2P35207 SCR1SCR1 522 nt17.29■□□□□ 0.36
SKI2P35207 RRN5YLR141W 1092 nt16.96■□□□□ 0.31
SKI2P35207 SHR5YOL110W 714 nt16.93■□□□□ 0.3
SKI2P35207 YDJ1YNL064C 1230 nt16.78■□□□□ 0.28
SKI2P35207 RSB1YOR049C 1065 nt16.65■□□□□ 0.26
SKI2P35207 YER088W-BYER088W-B 147 nt16.63■□□□□ 0.25
SKI2P35207 DEP1YAL013W 1218 nt16.51■□□□□ 0.23
SKI2P35207 GAR1YHR089C 618 nt16.47■□□□□ 0.23
SKI2P35207 URN1YPR152C 1398 nt16.47■□□□□ 0.23
SKI2P35207 PUT4YOR348C 1884 nt16.27■□□□□ 0.19
SKI2P35207 RPN10YHR200W 807 nt16.22■□□□□ 0.19
SKI2P35207 YNL208WYNL208W 600 nt16.2■□□□□ 0.18
SKI2P35207 OPI9YLR338W 858 nt16.19■□□□□ 0.18
SKI2P35207 PST2YDR032C 597 nt16.17■□□□□ 0.18
SKI2P35207 SAH1YER043C 1350 nt16.11■□□□□ 0.17
SKI2P35207 ARE1YCR048W 1833 nt15.99■□□□□ 0.15
SKI2P35207 SSA3YBL075C 1950 nt15.91■□□□□ 0.14
SKI2P35207 TIR1YER011W 765 nt15.89■□□□□ 0.13
SKI2P35207 YHR049C-AYHR049C-A 297 nt15.83■□□□□ 0.12
SKI2P35207 POA1YBR022W 534 nt15.8■□□□□ 0.12
SKI2P35207 PUN1YLR414C 792 nt15.73■□□□□ 0.11
SKI2P35207 YJR018WYJR018W 363 nt15.7■□□□□ 0.1
SKI2P35207 SSA1YAL005C 1929 nt15.69■□□□□ 0.1
SKI2P35207 YKL097CYKL097C 411 nt15.58■□□□□ 0.08
SKI2P35207 PTC2YER089C 1395 nt15.55■□□□□ 0.08
SKI2P35207 SHU1YHL006C 453 nt15.54■□□□□ 0.08
SKI2P35207 BUD23YCR047C 828 nt15.49■□□□□ 0.07
SKI2P35207 SRB2YHR041C 633 nt15.44■□□□□ 0.06 RIP-Chip
SKI2P35207 YJR120WYJR120W 351 nt15.44■□□□□ 0.06
SKI2P35207 BSC6YOL137W 1494 nt15.44■□□□□ 0.06
SKI2P35207 RPP2BYDR382W 333 nt15.4■□□□□ 0.06
SKI2P35207 YAL037C-BYAL037C-B 975 nt15.33■□□□□ 0.04
SKI2P35207 NAB2YGL122C 1578 nt15.32■□□□□ 0.04
SKI2P35207 WWM1YFL010C 636 nt15.21■□□□□ 0.03
SKI2P35207 FPR4YLR449W 1179 nt15.17■□□□□ 0.02
SKI2P35207 DAL1YIR027C 1383 nt15.14■□□□□ 0.01
SKI2P35207 FIS1YIL065C 468 nt15.12■□□□□ 0.01
SKI2P35207 INM2YDR287W 879 nt15.11■□□□□ 0.01
SKI2P35207 YGR021WYGR021W 873 nt15.1■□□□□ 0.01
SKI2P35207 BDH2YAL061W 1254 nt15.08■□□□□ 0
SKI2P35207 HOM6YJR139C 1080 nt15.05■□□□□ -0
SKI2P35207 MNP1YGL068W 585 nt15.03■□□□□ -0
SKI2P35207 PHO4YFR034C 939 nt15.01□□□□□ -0.01
SKI2P35207 YBL100CYBL100C 315 nt15.01□□□□□ -0.01
SKI2P35207 YOR139CYOR139C 393 nt14.94□□□□□ -0.02
SKI2P35207 YFL021C-AYFL021C-A 855 nt14.93□□□□□ -0.02
SKI2P35207 NPL3YDR432W 1245 nt14.85□□□□□ -0.03
SKI2P35207 LSM3YLR438C-A 270 nt14.85□□□□□ -0.03
SKI2P35207 RKM5YLR137W 1104 nt14.84□□□□□ -0.03
SKI2P35207 FUN26YAL022C 1554 nt14.82□□□□□ -0.04
SKI2P35207 TRM9YML014W 840 nt14.8□□□□□ -0.04
SKI2P35207 YOL037CYOL037C 354 nt14.74□□□□□ -0.05
SKI2P35207 YPS1YLR120C 1710 nt14.68□□□□□ -0.06
SKI2P35207 ALF1YNL148C 765 nt14.63□□□□□ -0.07
SKI2P35207 CCT6YDR188W 1641 nt14.63□□□□□ -0.07
SKI2P35207 YDR095CYDR095C 411 nt14.59□□□□□ -0.07
SKI2P35207 SPT5YML010W 3192 nt14.58□□□□□ -0.08
SKI2P35207 YHR165W-AYHR165W-A 312 nt14.56□□□□□ -0.08
SKI2P35207 SUF2tP(AGG)C 72 nt14.52□□□□□ -0.09
SKI2P35207 SUF10tP(AGG)N 72 nt14.52□□□□□ -0.09
SKI2P35207 MEP2YNL142W 1500 nt14.46□□□□□ -0.09
SKI2P35207 YLR281CYLR281C 468 nt14.38□□□□□ -0.11
SKI2P35207 WHI5YOR083W 888 nt14.36□□□□□ -0.11
SKI2P35207 tM(CAU)CtM(CAU)C 72 nt14.35□□□□□ -0.11
SKI2P35207 IMT4tM(CAU)E 72 nt14.35□□□□□ -0.11
SKI2P35207 IMT3tM(CAU)J3 72 nt14.35□□□□□ -0.11
SKI2P35207 IMT1tM(CAU)O1 72 nt14.35□□□□□ -0.11
SKI2P35207 IMT2tM(CAU)P 72 nt14.35□□□□□ -0.11
SKI2P35207 SIS1YNL007C 1059 nt14.35□□□□□ -0.11
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms