Protein–RNA interactions for Protein: P38961

RRP8, 25S rRNA (adenine(645)-N(1))-methyltransferase, yeastyeast

Known RBP Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP8P38961 YML009W-BYML009W-B 477 nt23.99■■□□□ 1.43
RRP8P38961 NSR1YGR159C 1245 nt23.79■■□□□ 1.4
RRP8P38961 NOP1YDL014W 984 nt23.42■■□□□ 1.34
RRP8P38961 YKL036CYKL036C 393 nt21.71■■□□□ 1.07
RRP8P38961 MDJ1YFL016C 1536 nt20.94■□□□□ 0.94
RRP8P38961 Q0297Q0297 156 nt20.54■□□□□ 0.88
RRP8P38961 SRX1YKL086W 384 nt20.46■□□□□ 0.87
RRP8P38961 YJL027CYJL027C 417 nt20.25■□□□□ 0.83
RRP8P38961 SCS3YGL126W 1143 nt19.79■□□□□ 0.76
RRP8P38961 YCR051WYCR051W 669 nt19.37■□□□□ 0.69
RRP8P38961 YOL085CYOL085C 342 nt18.77■□□□□ 0.6
RRP8P38961 DBP2YNL112W 1641 nt18.6■□□□□ 0.57
RRP8P38961 TRN1tP(UGG)A 72 nt18.43■□□□□ 0.54
RRP8P38961 SUF9tP(UGG)F 72 nt18.43■□□□□ 0.54
RRP8P38961 SUF8tP(UGG)H 72 nt18.43■□□□□ 0.54
RRP8P38961 tP(UGG)LtP(UGG)L 72 nt18.43■□□□□ 0.54
RRP8P38961 SUF7tP(UGG)M 72 nt18.43■□□□□ 0.54
RRP8P38961 tP(UGG)N1tP(UGG)N1 72 nt18.43■□□□□ 0.54
RRP8P38961 tP(UGG)N2tP(UGG)N2 72 nt18.43■□□□□ 0.54
RRP8P38961 tP(UGG)O1tP(UGG)O1 72 nt18.43■□□□□ 0.54
RRP8P38961 SUF11tP(UGG)O2 72 nt18.43■□□□□ 0.54
RRP8P38961 RPP1BYDL130W 321 nt18.42■□□□□ 0.54
RRP8P38961 PKP1YIL042C 1185 nt18.42■□□□□ 0.54
RRP8P38961 CCC1YLR220W 969 nt18.17■□□□□ 0.5
RRP8P38961 YBR190WYBR190W 312 nt17.89■□□□□ 0.45
RRP8P38961 SCJ1YMR214W 1134 nt17.75■□□□□ 0.43
RRP8P38961 ATS1YAL020C 1002 nt17.73■□□□□ 0.43
RRP8P38961 RVS167YDR388W 1449 nt17.56■□□□□ 0.4
RRP8P38961 PET122YER153C 765 nt17.55■□□□□ 0.4
RRP8P38961 tP(UGG)O3tP(UGG)O3 72 nt17.46■□□□□ 0.39
RRP8P38961 RTC3YHR087W 336 nt17.44■□□□□ 0.38
RRP8P38961 SCR1SCR1 522 nt17.44■□□□□ 0.38
RRP8P38961 RRN5YLR141W 1092 nt17.05■□□□□ 0.32
RRP8P38961 SHR5YOL110W 714 nt16.98■□□□□ 0.31
RRP8P38961 YDJ1YNL064C 1230 nt16.92■□□□□ 0.3
RRP8P38961 RSB1YOR049C 1065 nt16.74■□□□□ 0.27
RRP8P38961 YER088W-BYER088W-B 147 nt16.72■□□□□ 0.27
RRP8P38961 GAR1YHR089C 618 nt16.46■□□□□ 0.23
RRP8P38961 PST2YDR032C 597 nt16.41■□□□□ 0.22
RRP8P38961 URN1YPR152C 1398 nt16.39■□□□□ 0.21
RRP8P38961 DEP1YAL013W 1218 nt16.37■□□□□ 0.21
RRP8P38961 RPN10YHR200W 807 nt16.23■□□□□ 0.19
RRP8P38961 YNL208WYNL208W 600 nt16.2■□□□□ 0.18
RRP8P38961 OPI9YLR338W 858 nt16.16■□□□□ 0.18
RRP8P38961 PUT4YOR348C 1884 nt16.13■□□□□ 0.17
RRP8P38961 SAH1YER043C 1350 nt15.98■□□□□ 0.15
RRP8P38961 TIR1YER011W 765 nt15.93■□□□□ 0.14
RRP8P38961 ARE1YCR048W 1833 nt15.87■□□□□ 0.13
RRP8P38961 YKL097CYKL097C 411 nt15.82■□□□□ 0.12
RRP8P38961 PUN1YLR414C 792 nt15.71■□□□□ 0.11
RRP8P38961 SSA1YAL005C 1929 nt15.69■□□□□ 0.1
RRP8P38961 SHU1YHL006C 453 nt15.69■□□□□ 0.1
RRP8P38961 YHR049C-AYHR049C-A 297 nt15.66■□□□□ 0.1
RRP8P38961 YJR018WYJR018W 363 nt15.66■□□□□ 0.1
RRP8P38961 POA1YBR022W 534 nt15.61■□□□□ 0.09
RRP8P38961 PTC2YER089C 1395 nt15.45■□□□□ 0.06
RRP8P38961 YJR120WYJR120W 351 nt15.43■□□□□ 0.06
RRP8P38961 SRB2YHR041C 633 nt15.42■□□□□ 0.06
RRP8P38961 RPP2BYDR382W 333 nt15.4■□□□□ 0.06
RRP8P38961 YAL037C-BYAL037C-B 975 nt15.37■□□□□ 0.05
RRP8P38961 BUD23YCR047C 828 nt15.29■□□□□ 0.04
RRP8P38961 BSC6YOL137W 1494 nt15.27■□□□□ 0.03
RRP8P38961 NAB2YGL122C 1578 nt15.26■□□□□ 0.03
RRP8P38961 YGR021WYGR021W 873 nt15.24■□□□□ 0.03
RRP8P38961 WWM1YFL010C 636 nt15.22■□□□□ 0.03
RRP8P38961 HOM6YJR139C 1080 nt15.16■□□□□ 0.02
RRP8P38961 YOR139CYOR139C 393 nt15.15■□□□□ 0.02
RRP8P38961 INM2YDR287W 879 nt15.11■□□□□ 0.01
RRP8P38961 BDH2YAL061W 1254 nt15.11■□□□□ 0.01
RRP8P38961 DAL1YIR027C 1383 nt15.08■□□□□ 0
RRP8P38961 MNP1YGL068W 585 nt15.06■□□□□ 0
RRP8P38961 FIS1YIL065C 468 nt15.06■□□□□ 0
RRP8P38961 SSA3YBL075C 1950 nt15.04■□□□□ -0
RRP8P38961 YFL021C-AYFL021C-A 855 nt15.03■□□□□ -0
RRP8P38961 NPL3YDR432W 1245 nt15.02■□□□□ -0
RRP8P38961 FPR4YLR449W 1179 nt14.99□□□□□ -0.01
RRP8P38961 YBL100CYBL100C 315 nt14.97□□□□□ -0.01
RRP8P38961 LSM3YLR438C-A 270 nt14.96□□□□□ -0.01
RRP8P38961 RKM5YLR137W 1104 nt14.94□□□□□ -0.02
RRP8P38961 YOL037CYOL037C 354 nt14.94□□□□□ -0.02
RRP8P38961 PHO4YFR034C 939 nt14.93□□□□□ -0.02
RRP8P38961 FUN26YAL022C 1554 nt14.79□□□□□ -0.04
RRP8P38961 TRM9YML014W 840 nt14.79□□□□□ -0.04
RRP8P38961 CCT6YDR188W 1641 nt14.66□□□□□ -0.06
RRP8P38961 YPS1YLR120C 1710 nt14.61□□□□□ -0.07
RRP8P38961 tM(CAU)CtM(CAU)C 72 nt14.56□□□□□ -0.08
RRP8P38961 IMT4tM(CAU)E 72 nt14.56□□□□□ -0.08
RRP8P38961 IMT3tM(CAU)J3 72 nt14.56□□□□□ -0.08
RRP8P38961 IMT1tM(CAU)O1 72 nt14.56□□□□□ -0.08
RRP8P38961 IMT2tM(CAU)P 72 nt14.56□□□□□ -0.08
RRP8P38961 ALF1YNL148C 765 nt14.56□□□□□ -0.08
RRP8P38961 YDR095CYDR095C 411 nt14.55□□□□□ -0.08
RRP8P38961 YLR281CYLR281C 468 nt14.55□□□□□ -0.08
RRP8P38961 SUF2tP(AGG)C 72 nt14.54□□□□□ -0.08
RRP8P38961 SUF10tP(AGG)N 72 nt14.54□□□□□ -0.08
RRP8P38961 WHI5YOR083W 888 nt14.47□□□□□ -0.09
RRP8P38961 SPT5YML010W 3192 nt14.44□□□□□ -0.1
RRP8P38961 PUS2YGL063W 1113 nt14.41□□□□□ -0.1
RRP8P38961 YHR165W-AYHR165W-A 312 nt14.41□□□□□ -0.1
RRP8P38961 YLR154C-GYLR154C-G 150 nt14.37□□□□□ -0.11
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms