Protein–RNA interactions for Protein: P38170

BRN1, Condensin complex subunit 2, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRN1P38170 YML009W-BYML009W-B 477 nt24.13■■□□□ 1.45
BRN1P38170 NSR1YGR159C 1245 nt24.11■■□□□ 1.45
BRN1P38170 NOP1YDL014W 984 nt23.26■■□□□ 1.31
BRN1P38170 MDJ1YFL016C 1536 nt21.72■■□□□ 1.07
BRN1P38170 YKL036CYKL036C 393 nt21.33■■□□□ 1.01
BRN1P38170 SRX1YKL086W 384 nt20.39■□□□□ 0.85
BRN1P38170 Q0297Q0297 156 nt20.36■□□□□ 0.85
BRN1P38170 YJL027CYJL027C 417 nt19.93■□□□□ 0.78
BRN1P38170 SCS3YGL126W 1143 nt19.36■□□□□ 0.69
BRN1P38170 YCR051WYCR051W 669 nt19.35■□□□□ 0.69
BRN1P38170 DBP2YNL112W 1641 nt19.17■□□□□ 0.66
BRN1P38170 TRN1tP(UGG)A 72 nt18.6■□□□□ 0.57
BRN1P38170 SUF9tP(UGG)F 72 nt18.6■□□□□ 0.57
BRN1P38170 SUF8tP(UGG)H 72 nt18.6■□□□□ 0.57
BRN1P38170 tP(UGG)LtP(UGG)L 72 nt18.6■□□□□ 0.57
BRN1P38170 SUF7tP(UGG)M 72 nt18.6■□□□□ 0.57
BRN1P38170 tP(UGG)N1tP(UGG)N1 72 nt18.6■□□□□ 0.57
BRN1P38170 tP(UGG)N2tP(UGG)N2 72 nt18.6■□□□□ 0.57
BRN1P38170 tP(UGG)O1tP(UGG)O1 72 nt18.6■□□□□ 0.57
BRN1P38170 SUF11tP(UGG)O2 72 nt18.6■□□□□ 0.57
BRN1P38170 YOL085CYOL085C 342 nt18.53■□□□□ 0.56
BRN1P38170 YBR190WYBR190W 312 nt18.47■□□□□ 0.55
BRN1P38170 CCC1YLR220W 969 nt18.43■□□□□ 0.54
BRN1P38170 PKP1YIL042C 1185 nt18.34■□□□□ 0.53
BRN1P38170 RPP1BYDL130W 321 nt18.27■□□□□ 0.52
BRN1P38170 RTC3YHR087W 336 nt18.06■□□□□ 0.48
BRN1P38170 SCJ1YMR214W 1134 nt17.84■□□□□ 0.45
BRN1P38170 RVS167YDR388W 1449 nt17.79■□□□□ 0.44
BRN1P38170 PET122YER153C 765 nt17.55■□□□□ 0.4
BRN1P38170 tP(UGG)O3tP(UGG)O3 72 nt17.53■□□□□ 0.4
BRN1P38170 ATS1YAL020C 1002 nt17.24■□□□□ 0.35
BRN1P38170 SHR5YOL110W 714 nt17.19■□□□□ 0.34
BRN1P38170 SCR1SCR1 522 nt17.18■□□□□ 0.34
BRN1P38170 PUT4YOR348C 1884 nt17.03■□□□□ 0.32
BRN1P38170 RRN5YLR141W 1092 nt17.01■□□□□ 0.31
BRN1P38170 YDJ1YNL064C 1230 nt16.9■□□□□ 0.3
BRN1P38170 URN1YPR152C 1398 nt16.87■□□□□ 0.29
BRN1P38170 DEP1YAL013W 1218 nt16.85■□□□□ 0.29
BRN1P38170 ARE1YCR048W 1833 nt16.68■□□□□ 0.26
BRN1P38170 YER088W-BYER088W-B 147 nt16.67■□□□□ 0.26
BRN1P38170 SAH1YER043C 1350 nt16.65■□□□□ 0.26
BRN1P38170 OPI9YLR338W 858 nt16.64■□□□□ 0.25
BRN1P38170 GAR1YHR089C 618 nt16.62■□□□□ 0.25
BRN1P38170 RSB1YOR049C 1065 nt16.56■□□□□ 0.24
BRN1P38170 Q0182Q0182 405 nt16.49■□□□□ 0.23
BRN1P38170 POA1YBR022W 534 nt16.48■□□□□ 0.23
BRN1P38170 YNL208WYNL208W 600 nt16.47■□□□□ 0.23
BRN1P38170 RPN10YHR200W 807 nt16.45■□□□□ 0.22
BRN1P38170 YHR049C-AYHR049C-A 297 nt16.42■□□□□ 0.22
BRN1P38170 SSA3YBL075C 1950 nt16.38■□□□□ 0.21
BRN1P38170 BSC6YOL137W 1494 nt16.16■□□□□ 0.18
BRN1P38170 PUN1YLR414C 792 nt16.11■□□□□ 0.17
BRN1P38170 TIR1YER011W 765 nt16.06■□□□□ 0.16
BRN1P38170 YJR018WYJR018W 363 nt16.05■□□□□ 0.16
BRN1P38170 PTC2YER089C 1395 nt16.02■□□□□ 0.16
BRN1P38170 PST2YDR032C 597 nt16.02■□□□□ 0.16
BRN1P38170 BUD23YCR047C 828 nt16.01■□□□□ 0.15
BRN1P38170 SSA1YAL005C 1929 nt15.98■□□□□ 0.15
BRN1P38170 YJR120WYJR120W 351 nt15.89■□□□□ 0.13
BRN1P38170 NAB2YGL122C 1578 nt15.8■□□□□ 0.12
BRN1P38170 SRB2YHR041C 633 nt15.78■□□□□ 0.12
BRN1P38170 MOT3YMR070W 1473 nt15.74■□□□□ 0.11
BRN1P38170 FIS1YIL065C 468 nt15.64■□□□□ 0.09
BRN1P38170 SPT5YML010W 3192 nt15.63■□□□□ 0.09
BRN1P38170 RPP2BYDR382W 333 nt15.6■□□□□ 0.09
BRN1P38170 DAL1YIR027C 1383 nt15.57■□□□□ 0.08
BRN1P38170 FPR4YLR449W 1179 nt15.55■□□□□ 0.08
BRN1P38170 INM2YDR287W 879 nt15.45■□□□□ 0.06
BRN1P38170 PHO4YFR034C 939 nt15.45■□□□□ 0.06
BRN1P38170 SHU1YHL006C 453 nt15.45■□□□□ 0.06
BRN1P38170 WWM1YFL010C 636 nt15.37■□□□□ 0.05
BRN1P38170 YBL100CYBL100C 315 nt15.34■□□□□ 0.05
BRN1P38170 YAL037C-BYAL037C-B 975 nt15.32■□□□□ 0.04
BRN1P38170 BDH2YAL061W 1254 nt15.32■□□□□ 0.04
BRN1P38170 YPS1YLR120C 1710 nt15.23■□□□□ 0.03
BRN1P38170 YKL097CYKL097C 411 nt15.22■□□□□ 0.03
BRN1P38170 MEP2YNL142W 1500 nt15.17■□□□□ 0.02
BRN1P38170 FUN26YAL022C 1554 nt15.15■□□□□ 0.02
BRN1P38170 HOM6YJR139C 1080 nt15.12■□□□□ 0.01
BRN1P38170 YDR095CYDR095C 411 nt15.09■□□□□ 0.01
BRN1P38170 YGR021WYGR021W 873 nt15.09■□□□□ 0.01
BRN1P38170 SSA4YER103W 1929 nt15.09■□□□□ 0.01
BRN1P38170 MNP1YGL068W 585 nt15.08■□□□□ 0
BRN1P38170 YHR165W-AYHR165W-A 312 nt15.04■□□□□ -0
BRN1P38170 LSM3YLR438C-A 270 nt15.04■□□□□ -0
BRN1P38170 TRM9YML014W 840 nt15.04■□□□□ -0
BRN1P38170 YFL021C-AYFL021C-A 855 nt15.03■□□□□ -0
BRN1P38170 DCW1YKL046C 1350 nt14.99□□□□□ -0.01
BRN1P38170 CCT6YDR188W 1641 nt14.93□□□□□ -0.02
BRN1P38170 ALF1YNL148C 765 nt14.92□□□□□ -0.02
BRN1P38170 RKM5YLR137W 1104 nt14.89□□□□□ -0.03
BRN1P38170 PTP1YDL230W 1008 nt14.84□□□□□ -0.03
BRN1P38170 RPP2AYOL039W 321 nt14.79□□□□□ -0.04
BRN1P38170 CAC2YML102W 1407 nt14.77□□□□□ -0.04
BRN1P38170 SIS1YNL007C 1059 nt14.76□□□□□ -0.05
BRN1P38170 YOR139CYOR139C 393 nt14.75□□□□□ -0.05
BRN1P38170 SUF2tP(AGG)C 72 nt14.74□□□□□ -0.05
BRN1P38170 SUF10tP(AGG)N 72 nt14.74□□□□□ -0.05
BRN1P38170 EMI2YDR516C 1503 nt14.74□□□□□ -0.05
BRN1P38170 ART5YGR068C 1761 nt14.61□□□□□ -0.07
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms