Protein–RNA interactions for Protein: Q08282

PPM2, tRNA wybutosine-synthesizing protein 4, yeastyeast

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PPM2Q08282 YML009W-BYML009W-B 477 nt24.05■■□□□ 1.44
PPM2Q08282 NSR1YGR159C 1245 nt23.74■■□□□ 1.39
PPM2Q08282 NOP1YDL014W 984 nt23.31■■□□□ 1.32
PPM2Q08282 YKL036CYKL036C 393 nt22■■□□□ 1.11
PPM2Q08282 MDJ1YFL016C 1536 nt21.09■□□□□ 0.97
PPM2Q08282 YJL027CYJL027C 417 nt20.66■□□□□ 0.9
PPM2Q08282 Q0297Q0297 156 nt20.56■□□□□ 0.88
PPM2Q08282 SRX1YKL086W 384 nt20.43■□□□□ 0.86
PPM2Q08282 SCS3YGL126W 1143 nt20.32■□□□□ 0.84
PPM2Q08282 YCR051WYCR051W 669 nt19.43■□□□□ 0.7
PPM2Q08282 YOL085CYOL085C 342 nt19.06■□□□□ 0.64
PPM2Q08282 PKP1YIL042C 1185 nt18.78■□□□□ 0.6
PPM2Q08282 DBP2YNL112W 1641 nt18.71■□□□□ 0.59
PPM2Q08282 SCJ1YMR214W 1134 nt18.55■□□□□ 0.56
PPM2Q08282 RPP1BYDL130W 321 nt18.47■□□□□ 0.55
PPM2Q08282 TRN1tP(UGG)A 72 nt18.43■□□□□ 0.54
PPM2Q08282 SUF9tP(UGG)F 72 nt18.43■□□□□ 0.54
PPM2Q08282 SUF8tP(UGG)H 72 nt18.43■□□□□ 0.54
PPM2Q08282 tP(UGG)LtP(UGG)L 72 nt18.43■□□□□ 0.54
PPM2Q08282 SUF7tP(UGG)M 72 nt18.43■□□□□ 0.54
PPM2Q08282 tP(UGG)N1tP(UGG)N1 72 nt18.43■□□□□ 0.54
PPM2Q08282 tP(UGG)N2tP(UGG)N2 72 nt18.43■□□□□ 0.54
PPM2Q08282 tP(UGG)O1tP(UGG)O1 72 nt18.43■□□□□ 0.54
PPM2Q08282 SUF11tP(UGG)O2 72 nt18.43■□□□□ 0.54
PPM2Q08282 ATS1YAL020C 1002 nt18.31■□□□□ 0.52
PPM2Q08282 CCC1YLR220W 969 nt18.3■□□□□ 0.52
PPM2Q08282 YBR190WYBR190W 312 nt17.86■□□□□ 0.45
PPM2Q08282 PET122YER153C 765 nt17.63■□□□□ 0.41
PPM2Q08282 SCR1SCR1 522 nt17.53■□□□□ 0.4
PPM2Q08282 RTC3YHR087W 336 nt17.5■□□□□ 0.39
PPM2Q08282 tP(UGG)O3tP(UGG)O3 72 nt17.49■□□□□ 0.39
PPM2Q08282 RVS167YDR388W 1449 nt17.47■□□□□ 0.39
PPM2Q08282 RRN5YLR141W 1092 nt17.18■□□□□ 0.34
PPM2Q08282 RSB1YOR049C 1065 nt16.98■□□□□ 0.31
PPM2Q08282 SHR5YOL110W 714 nt16.94■□□□□ 0.3
PPM2Q08282 PST2YDR032C 597 nt16.86■□□□□ 0.29
PPM2Q08282 YDJ1YNL064C 1230 nt16.86■□□□□ 0.29
PPM2Q08282 YER088W-BYER088W-B 147 nt16.83■□□□□ 0.28
PPM2Q08282 GAR1YHR089C 618 nt16.54■□□□□ 0.24
PPM2Q08282 DEP1YAL013W 1218 nt16.53■□□□□ 0.24
PPM2Q08282 YKL097CYKL097C 411 nt16.47■□□□□ 0.23
PPM2Q08282 URN1YPR152C 1398 nt16.45■□□□□ 0.22
PPM2Q08282 PUT4YOR348C 1884 nt16.19■□□□□ 0.18
PPM2Q08282 YNL208WYNL208W 600 nt16.17■□□□□ 0.18
PPM2Q08282 OPI9YLR338W 858 nt16.16■□□□□ 0.18
PPM2Q08282 RPN10YHR200W 807 nt16.11■□□□□ 0.17
PPM2Q08282 SAH1YER043C 1350 nt16.09■□□□□ 0.17
PPM2Q08282 SHU1YHL006C 453 nt16.08■□□□□ 0.16
PPM2Q08282 TIR1YER011W 765 nt15.96■□□□□ 0.15
PPM2Q08282 ARE1YCR048W 1833 nt15.95■□□□□ 0.14
PPM2Q08282 SSA1YAL005C 1929 nt15.8■□□□□ 0.12
PPM2Q08282 YAL037C-BYAL037C-B 975 nt15.74■□□□□ 0.11
PPM2Q08282 YOR139CYOR139C 393 nt15.74■□□□□ 0.11
PPM2Q08282 YHR049C-AYHR049C-A 297 nt15.73■□□□□ 0.11
PPM2Q08282 POA1YBR022W 534 nt15.73■□□□□ 0.11
PPM2Q08282 YJR018WYJR018W 363 nt15.68■□□□□ 0.1
PPM2Q08282 SRB2YHR041C 633 nt15.65■□□□□ 0.1
PPM2Q08282 PUN1YLR414C 792 nt15.64■□□□□ 0.09
PPM2Q08282 YJR120WYJR120W 351 nt15.55■□□□□ 0.08
PPM2Q08282 PTC2YER089C 1395 nt15.5■□□□□ 0.07
PPM2Q08282 NPL3YDR432W 1245 nt15.48■□□□□ 0.07
PPM2Q08282 BUD23YCR047C 828 nt15.39■□□□□ 0.05
PPM2Q08282 BSC6YOL137W 1494 nt15.33■□□□□ 0.05
PPM2Q08282 WWM1YFL010C 636 nt15.33■□□□□ 0.04
PPM2Q08282 RPP2BYDR382W 333 nt15.32■□□□□ 0.04
PPM2Q08282 NAB2YGL122C 1578 nt15.24■□□□□ 0.03
PPM2Q08282 MNP1YGL068W 585 nt15.23■□□□□ 0.03
PPM2Q08282 HOM6YJR139C 1080 nt15.18■□□□□ 0.02
PPM2Q08282 YGR021WYGR021W 873 nt15.16■□□□□ 0.02
PPM2Q08282 SSA3YBL075C 1950 nt15.13■□□□□ 0.01
PPM2Q08282 tM(CAU)CtM(CAU)C 72 nt15.09■□□□□ 0.01
PPM2Q08282 IMT4tM(CAU)E 72 nt15.09■□□□□ 0.01
PPM2Q08282 IMT3tM(CAU)J3 72 nt15.09■□□□□ 0.01
PPM2Q08282 IMT1tM(CAU)O1 72 nt15.09■□□□□ 0.01
PPM2Q08282 IMT2tM(CAU)P 72 nt15.09■□□□□ 0.01
PPM2Q08282 FIS1YIL065C 468 nt15.09■□□□□ 0.01
PPM2Q08282 BDH2YAL061W 1254 nt15.09■□□□□ 0.01
PPM2Q08282 FPR4YLR449W 1179 nt15.09■□□□□ 0.01
PPM2Q08282 YOL037CYOL037C 354 nt15.09■□□□□ 0.01
PPM2Q08282 DAL1YIR027C 1383 nt15.07■□□□□ 0
PPM2Q08282 INM2YDR287W 879 nt15.05■□□□□ -0
PPM2Q08282 YFL021C-AYFL021C-A 855 nt14.98□□□□□ -0.01
PPM2Q08282 YBL100CYBL100C 315 nt14.97□□□□□ -0.01
PPM2Q08282 PHO4YFR034C 939 nt14.95□□□□□ -0.02
PPM2Q08282 RKM5YLR137W 1104 nt14.95□□□□□ -0.02
PPM2Q08282 Q0182Q0182 405 nt14.89□□□□□ -0.03
PPM2Q08282 LSM3YLR438C-A 270 nt14.87□□□□□ -0.03
PPM2Q08282 FUN26YAL022C 1554 nt14.81□□□□□ -0.04
PPM2Q08282 PUS2YGL063W 1113 nt14.8□□□□□ -0.04
PPM2Q08282 TRM9YML014W 840 nt14.77□□□□□ -0.05
PPM2Q08282 YLR281CYLR281C 468 nt14.73□□□□□ -0.05
PPM2Q08282 MOT3YMR070W 1473 nt14.7□□□□□ -0.06
PPM2Q08282 WHI5YOR083W 888 nt14.64□□□□□ -0.07
PPM2Q08282 YPS1YLR120C 1710 nt14.62□□□□□ -0.07
PPM2Q08282 CCT6YDR188W 1641 nt14.62□□□□□ -0.07
PPM2Q08282 YDR095CYDR095C 411 nt14.53□□□□□ -0.08
PPM2Q08282 ALF1YNL148C 765 nt14.53□□□□□ -0.08
PPM2Q08282 SPT5YML010W 3192 nt14.53□□□□□ -0.08
PPM2Q08282 FMP45YDL222C 930 nt14.44□□□□□ -0.1
PPM2Q08282 YHR165W-AYHR165W-A 312 nt14.44□□□□□ -0.1
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms