RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W AAP1P37898 856 aaKnown RBP7.15□□□□□ -1.26
CAF40YNL288W AHP1P38013 176 aaKnown RBP7.15□□□□□ -1.26
CAF40YNL288W RRP8P38961 392 aaKnown RBP7.15□□□□□ -1.26
CAF40YNL288W SNU71P53207 620 aaKnown RBP7.15□□□□□ -1.26
CAF40YNL288W YPL260WQ08977 551 aa7.15□□□□□ -1.26
CAF40YNL288W SSF2Q12153 453 aaPredicted RBP7.15□□□□□ -1.26
CAF40YNL288W CDC19P00549 500 aaKnown RBP7.14□□□□□ -1.27
CAF40YNL288W RAD53P22216 821 aa7.14□□□□□ -1.27
CAF40YNL288W PHO87P25360 923 aa7.14□□□□□ -1.27
CAF40YNL288W BRN1P38170 754 aa7.14□□□□□ -1.27
CAF40YNL288W TPS3P38426 1054 aaKnown RBP7.14□□□□□ -1.27
CAF40YNL288W RTS1P38903 757 aa7.14□□□□□ -1.27
CAF40YNL288W ROG3P43602 733 aa7.14□□□□□ -1.27
CAF40YNL288W KEL3Q08979 651 aaPredicted RBP7.14□□□□□ -1.27
CAF40YNL288W HAP4P14064 554 aa7.13□□□□□ -1.27
CAF40YNL288W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
CAF40YNL288W KEL1P38853 1164 aaKnown RBP7.13□□□□□ -1.27
CAF40YNL288W SLN1P39928 1220 aaPredicted RBP7.13□□□□□ -1.27
CAF40YNL288W ACS2P52910 683 aaKnown RBP7.13□□□□□ -1.27
CAF40YNL288W TY1A-MR1Q04215 440 aa7.13□□□□□ -1.27
CAF40YNL288W PPM2Q08282 695 aa7.13□□□□□ -1.27
CAF40YNL288W COQ1P18900 473 aa7.12□□□□□ -1.27
CAF40YNL288W TGL4P36165 910 aa7.12□□□□□ -1.27
CAF40YNL288W YBL028CP38202 106 aa7.12□□□□□ -1.27
CAF40YNL288W BSD2P38356 321 aa7.12□□□□□ -1.27
CAF40YNL288W YHL050CP38721 697 aa7.12□□□□□ -1.27
CAF40YNL288W ETP1P38748 585 aaKnown RBP7.12□□□□□ -1.27
CAF40YNL288W MRD1Q06106 887 aaKnown RBP7.12□□□□□ -1.27
CAF40YNL288W RLF2Q12495 606 aa7.12□□□□□ -1.27
CAF40YNL288W RAD61Q99359 647 aa7.12□□□□□ -1.27
CAF40YNL288W PRE8P23639 250 aa7.11□□□□□ -1.27
CAF40YNL288W CRG1P38892 291 aaRIP-Chip data7.11□□□□□ -1.27not detected
CAF40YNL288W UBP15P50101 1230 aa7.11□□□□□ -1.27
CAF40YNL288W UFD2P54860 961 aa7.11□□□□□ -1.27
CAF40YNL288W YDL124WQ07551 312 aaKnown RBP7.11□□□□□ -1.27
CAF40YNL288W GIN4Q12263 1142 aa7.11□□□□□ -1.27
CAF40YNL288W GSC2P40989 1895 aa7.11□□□□□ -1.27
CAF40YNL288W CYT1P07143 309 aa7.1□□□□□ -1.27
CAF40YNL288W PFK2P16862 959 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
CAF40YNL288W RPC31P17890 251 aa7.1□□□□□ -1.27
CAF40YNL288W SRM1P21827 482 aa7.1□□□□□ -1.27
CAF40YNL288W CST26P38226 397 aa7.1□□□□□ -1.27
CAF40YNL288W PES4P39684 611 aa7.1□□□□□ -1.27
CAF40YNL288W VID27P40157 782 aa7.1□□□□□ -1.27
CAF40YNL288W NAM8Q00539 523 aaKnown RBP7.1□□□□□ -1.27
CAF40YNL288W RPS15Q01855 142 aaKnown RBP7.1□□□□□ -1.27
CAF40YNL288W SPN1Q06505 410 aaPredicted RBP7.1□□□□□ -1.27
CAF40YNL288W TUB2P02557 457 aaKnown RBP7.09□□□□□ -1.27
CAF40YNL288W HVG1P0CE11 249 aa7.09□□□□□ -1.27
CAF40YNL288W PNT1P38969 423 aa7.09□□□□□ -1.27
CAF40YNL288W HXT13P39924 564 aa7.09□□□□□ -1.27
CAF40YNL288W SPO22P40511 975 aa7.09□□□□□ -1.27
CAF40YNL288W HXT17P53631 564 aa7.09□□□□□ -1.27
CAF40YNL288W ECM23Q02710 187 aa7.09□□□□□ -1.27
CAF40YNL288W SKG3Q06315 1026 aa7.09□□□□□ -1.27
CAF40YNL288W YPQ2Q06328 317 aa7.09□□□□□ -1.27
CAF40YNL288W TY1A-DR3Q12441 440 aa7.09□□□□□ -1.27
CAF40YNL288W CHO2P05374 869 aaKnown RBP7.08□□□□□ -1.28
CAF40YNL288W PEP3P27801 918 aa7.08□□□□□ -1.28
CAF40YNL288W IRE1P32361 1115 aa7.08□□□□□ -1.28
CAF40YNL288W MYO3P36006 1272 aa7.08□□□□□ -1.28
CAF40YNL288W ANP1P32629 500 aa7.07□□□□□ -1.28
CAF40YNL288W OCT1P35999 772 aa7.07□□□□□ -1.28
CAF40YNL288W CIC1P38779 376 aaKnown RBP7.07□□□□□ -1.28
CAF40YNL288W VPS8P39702 1274 aa7.07□□□□□ -1.28
CAF40YNL288W ACA1P39970 489 aa7.07□□□□□ -1.28
CAF40YNL288W YGR035CP53222 116 aa7.07□□□□□ -1.28
CAF40YNL288W SUB2Q07478 446 aaKnown RBP7.07□□□□□ -1.28
CAF40YNL288W TIF6Q12522 245 aaKnown RBP7.07□□□□□ -1.28
CAF40YNL288W MCM1P11746 286 aa7.06□□□□□ -1.28
CAF40YNL288W RER2P35196 286 aa7.06□□□□□ -1.28
CAF40YNL288W TIF4631P39935 952 aaKnown RBP7.06□□□□□ -1.28
CAF40YNL288W RBA50Q04418 439 aa7.06□□□□□ -1.28
CAF40YNL288W LAP2Q10740 671 aa7.06□□□□□ -1.28
CAF40YNL288W CLF1Q12309 687 aaPredicted RBP7.06□□□□□ -1.28
CAF40YNL288W TUS1Q06412 1307 aa7.05□□□□□ -1.28
CAF40YNL288W CCP1P00431 361 aa7.05□□□□□ -1.28
CAF40YNL288W RIT1P23796 513 aa7.05□□□□□ -1.28
CAF40YNL288W IMP2'P32351 346 aa7.05□□□□□ -1.28
CAF40YNL288W APE3P37302 537 aaKnown RBP7.05□□□□□ -1.28
CAF40YNL288W LYS14P40971 790 aa7.05□□□□□ -1.28
CAF40YNL288W ALG2P43636 503 aa7.05□□□□□ -1.28
CAF40YNL288W ROM1P53046 1155 aa7.05□□□□□ -1.28
CAF40YNL288W DUS1P53759 423 aaKnown RBP7.05□□□□□ -1.28
CAF40YNL288W HPF1Q05164 967 aa7.05□□□□□ -1.28
CAF40YNL288W ESF1Q06344 628 aaKnown RBP7.05□□□□□ -1.28
CAF40YNL288W RNR2P09938 399 aaKnown RBP7.04□□□□□ -1.28
CAF40YNL288W VAN1P23642 535 aa7.04□□□□□ -1.28
CAF40YNL288W PUP1P25043 261 aa7.04□□□□□ -1.28
CAF40YNL288W CHS3P29465 1165 aa7.04□□□□□ -1.28
CAF40YNL288W PRO3P32263 286 aaKnown RBP7.04□□□□□ -1.28
CAF40YNL288W SHM1P37292 490 aaPredicted RBP7.04□□□□□ -1.28
CAF40YNL288W UBX7P38349 436 aa7.04□□□□□ -1.28
CAF40YNL288W VAB2P40003 282 aa7.04□□□□□ -1.28
CAF40YNL288W KRI1P42846 591 aaKnown RBP7.04□□□□□ -1.28
CAF40YNL288W NET1P47035 1189 aa7.04□□□□□ -1.28
CAF40YNL288W CUZ1P53899 274 aa7.04□□□□□ -1.28
CAF40YNL288W EST2Q06163 884 aa7.04□□□□□ -1.28
CAF40YNL288W TRL1P09880 827 aaKnown RBP7.03□□□□□ -1.28
CAF40YNL288W MAK31P23059 88 aa7.03□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms