Protein–RNA interactions for Protein: P23642

VAN1, Mannan polymerase I complex VAN1 subunit, yeastyeast

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAN1P23642 YML009W-BYML009W-B 477 nt20.27■□□□□ 0.84
VAN1P23642 NSR1YGR159C 1245 nt20.14■□□□□ 0.81
VAN1P23642 NOP1YDL014W 984 nt19.77■□□□□ 0.76
VAN1P23642 YKL036CYKL036C 393 nt18.27■□□□□ 0.52
VAN1P23642 MDJ1YFL016C 1536 nt18.21■□□□□ 0.51
VAN1P23642 Q0297Q0297 156 nt17.31■□□□□ 0.36
VAN1P23642 SRX1YKL086W 384 nt17.25■□□□□ 0.35
VAN1P23642 YJL027CYJL027C 417 nt17.07■□□□□ 0.32
VAN1P23642 SCS3YGL126W 1143 nt16.63■□□□□ 0.25
VAN1P23642 YCR051WYCR051W 669 nt16.38■□□□□ 0.21
VAN1P23642 DBP2YNL112W 1641 nt15.89■□□□□ 0.13
VAN1P23642 YOL085CYOL085C 342 nt15.84■□□□□ 0.13
VAN1P23642 YBR190WYBR190W 312 nt15.67■□□□□ 0.1
VAN1P23642 PKP1YIL042C 1185 nt15.57■□□□□ 0.08
VAN1P23642 TRN1tP(UGG)A 72 nt15.55■□□□□ 0.08
VAN1P23642 SUF9tP(UGG)F 72 nt15.55■□□□□ 0.08
VAN1P23642 SUF8tP(UGG)H 72 nt15.55■□□□□ 0.08
VAN1P23642 tP(UGG)LtP(UGG)L 72 nt15.55■□□□□ 0.08
VAN1P23642 SUF7tP(UGG)M 72 nt15.55■□□□□ 0.08
VAN1P23642 tP(UGG)N1tP(UGG)N1 72 nt15.55■□□□□ 0.08
VAN1P23642 tP(UGG)N2tP(UGG)N2 72 nt15.55■□□□□ 0.08
VAN1P23642 tP(UGG)O1tP(UGG)O1 72 nt15.55■□□□□ 0.08
VAN1P23642 SUF11tP(UGG)O2 72 nt15.55■□□□□ 0.08
VAN1P23642 RPP1BYDL130W 321 nt15.53■□□□□ 0.08
VAN1P23642 SSA3YBL075C 1950 nt15.53■□□□□ 0.08
VAN1P23642 CCC1YLR220W 969 nt15.43■□□□□ 0.06
VAN1P23642 RTC3YHR087W 336 nt15.24■□□□□ 0.03
VAN1P23642 Q0182Q0182 405 nt15.17■□□□□ 0.02
VAN1P23642 ATS1YAL020C 1002 nt14.92□□□□□ -0.02
VAN1P23642 MOT3YMR070W 1473 nt14.88□□□□□ -0.03
VAN1P23642 RVS167YDR388W 1449 nt14.86□□□□□ -0.03
VAN1P23642 SCJ1YMR214W 1134 nt14.83□□□□□ -0.04
VAN1P23642 PUT4YOR348C 1884 nt14.82□□□□□ -0.04
VAN1P23642 PET122YER153C 765 nt14.81□□□□□ -0.04
VAN1P23642 tP(UGG)O3tP(UGG)O3 72 nt14.75□□□□□ -0.05
VAN1P23642 SCR1SCR1 522 nt14.7□□□□□ -0.06
VAN1P23642 RRN5YLR141W 1092 nt14.42□□□□□ -0.1
VAN1P23642 SHR5YOL110W 714 nt14.34□□□□□ -0.11
VAN1P23642 ARE1YCR048W 1833 nt14.34□□□□□ -0.11
VAN1P23642 YDJ1YNL064C 1230 nt14.27□□□□□ -0.13
VAN1P23642 POA1YBR022W 534 nt14.25□□□□□ -0.13
VAN1P23642 YER088W-BYER088W-B 147 nt14.13□□□□□ -0.15
VAN1P23642 YHR049C-AYHR049C-A 297 nt14.12□□□□□ -0.15
VAN1P23642 RSB1YOR049C 1065 nt14.12□□□□□ -0.15
VAN1P23642 SAH1YER043C 1350 nt14.1□□□□□ -0.15
VAN1P23642 BSC6YOL137W 1494 nt14.09□□□□□ -0.15
VAN1P23642 SPT5YML010W 3192 nt14.07□□□□□ -0.16
VAN1P23642 URN1YPR152C 1398 nt14.07□□□□□ -0.16
VAN1P23642 OPI9YLR338W 858 nt14.01□□□□□ -0.17
VAN1P23642 GAR1YHR089C 618 nt13.95□□□□□ -0.18
VAN1P23642 DEP1YAL013W 1218 nt13.92□□□□□ -0.18
VAN1P23642 SSA4YER103W 1929 nt13.82□□□□□ -0.2
VAN1P23642 PST2YDR032C 597 nt13.82□□□□□ -0.2
VAN1P23642 RPN10YHR200W 807 nt13.73□□□□□ -0.21
VAN1P23642 YNL208WYNL208W 600 nt13.72□□□□□ -0.21
VAN1P23642 BUD23YCR047C 828 nt13.69□□□□□ -0.22
VAN1P23642 PUN1YLR414C 792 nt13.55□□□□□ -0.24
VAN1P23642 PTC2YER089C 1395 nt13.54□□□□□ -0.24
VAN1P23642 TIR1YER011W 765 nt13.47□□□□□ -0.25
VAN1P23642 NAB2YGL122C 1578 nt13.44□□□□□ -0.26
VAN1P23642 BDF1YLR399C 2061 nt13.41□□□□□ -0.26
VAN1P23642 YJR018WYJR018W 363 nt13.36□□□□□ -0.27
VAN1P23642 MEP2YNL142W 1500 nt13.3□□□□□ -0.28
VAN1P23642 SSA1YAL005C 1929 nt13.29□□□□□ -0.28
VAN1P23642 YKL097CYKL097C 411 nt13.28□□□□□ -0.28
VAN1P23642 FIS1YIL065C 468 nt13.26□□□□□ -0.29
VAN1P23642 SHU1YHL006C 453 nt13.22□□□□□ -0.29
VAN1P23642 TAT1YBR069C 1860 nt13.2□□□□□ -0.3
VAN1P23642 DAL1YIR027C 1383 nt13.14□□□□□ -0.31
VAN1P23642 YJR120WYJR120W 351 nt13.13□□□□□ -0.31
VAN1P23642 DCW1YKL046C 1350 nt13.11□□□□□ -0.31
VAN1P23642 NME1NME1 340 nt13.11□□□□□ -0.31
VAN1P23642 SRB2YHR041C 633 nt13.06□□□□□ -0.32
VAN1P23642 FPR4YLR449W 1179 nt13.05□□□□□ -0.32
VAN1P23642 YPS1YLR120C 1710 nt13.05□□□□□ -0.32
VAN1P23642 PHO4YFR034C 939 nt13.04□□□□□ -0.32
VAN1P23642 RPP2BYDR382W 333 nt13.03□□□□□ -0.32
VAN1P23642 YAL037C-BYAL037C-B 975 nt13.02□□□□□ -0.33
VAN1P23642 INM2YDR287W 879 nt12.94□□□□□ -0.34
VAN1P23642 YGR139WYGR139W 339 nt12.93□□□□□ -0.34
VAN1P23642 YBR220CYBR220C 1683 nt12.91□□□□□ -0.34
VAN1P23642 WWM1YFL010C 636 nt12.89□□□□□ -0.35
VAN1P23642 YHR165W-AYHR165W-A 312 nt12.89□□□□□ -0.35
VAN1P23642 EMI2YDR516C 1503 nt12.88□□□□□ -0.35
VAN1P23642 YDR095CYDR095C 411 nt12.85□□□□□ -0.35
VAN1P23642 YGR021WYGR021W 873 nt12.82□□□□□ -0.36
VAN1P23642 PAC11YDR488C 1602 nt12.78□□□□□ -0.36
VAN1P23642 HOM6YJR139C 1080 nt12.78□□□□□ -0.36
VAN1P23642 BDH2YAL061W 1254 nt12.78□□□□□ -0.36
VAN1P23642 YMR090WYMR090W 684 nt12.76□□□□□ -0.37
VAN1P23642 YBL100CYBL100C 315 nt12.74□□□□□ -0.37
VAN1P23642 YDL221WYDL221W 552 nt12.73□□□□□ -0.37
VAN1P23642 YOR139CYOR139C 393 nt12.73□□□□□ -0.37
VAN1P23642 SDH1YKL148C 1923 nt12.71□□□□□ -0.37
VAN1P23642 MNP1YGL068W 585 nt12.7□□□□□ -0.38
VAN1P23642 CAC2YML102W 1407 nt12.7□□□□□ -0.38
VAN1P23642 PTP1YDL230W 1008 nt12.68□□□□□ -0.38
VAN1P23642 YFL021C-AYFL021C-A 855 nt12.68□□□□□ -0.38
VAN1P23642 LSM3YLR438C-A 270 nt12.65□□□□□ -0.38
VAN1P23642 NPL3YDR432W 1245 nt12.62□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 32.7 ms