Protein–RNA interactions for Protein: P53899

CUZ1, CDC48-associated ubiquitin-like/zinc finger protein 1, yeastyeast

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUZ1P53899 YML009W-BYML009W-B 477 nt18.64■□□□□ 0.57
CUZ1P53899 NSR1YGR159C 1245 nt18.49■□□□□ 0.55
CUZ1P53899 NOP1YDL014W 984 nt18.17■□□□□ 0.5
CUZ1P53899 YKL036CYKL036C 393 nt16.79■□□□□ 0.28
CUZ1P53899 MDJ1YFL016C 1536 nt16.34■□□□□ 0.21
CUZ1P53899 Q0297Q0297 156 nt15.89■□□□□ 0.13
CUZ1P53899 SRX1YKL086W 384 nt15.85■□□□□ 0.13
CUZ1P53899 YJL027CYJL027C 417 nt15.68■□□□□ 0.1
CUZ1P53899 SCS3YGL126W 1143 nt15.27■□□□□ 0.04
CUZ1P53899 YCR051WYCR051W 669 nt15.04■□□□□ -0
CUZ1P53899 YOL085CYOL085C 342 nt14.51□□□□□ -0.09
CUZ1P53899 DBP2YNL112W 1641 nt14.46□□□□□ -0.09
CUZ1P53899 TRN1tP(UGG)A 72 nt14.29□□□□□ -0.12
CUZ1P53899 SUF9tP(UGG)F 72 nt14.29□□□□□ -0.12
CUZ1P53899 SUF8tP(UGG)H 72 nt14.29□□□□□ -0.12
CUZ1P53899 tP(UGG)LtP(UGG)L 72 nt14.29□□□□□ -0.12
CUZ1P53899 SUF7tP(UGG)M 72 nt14.29□□□□□ -0.12
CUZ1P53899 tP(UGG)N1tP(UGG)N1 72 nt14.29□□□□□ -0.12
CUZ1P53899 tP(UGG)N2tP(UGG)N2 72 nt14.29□□□□□ -0.12
CUZ1P53899 tP(UGG)O1tP(UGG)O1 72 nt14.29□□□□□ -0.12
CUZ1P53899 SUF11tP(UGG)O2 72 nt14.29□□□□□ -0.12
CUZ1P53899 PKP1YIL042C 1185 nt14.27□□□□□ -0.13
CUZ1P53899 RPP1BYDL130W 321 nt14.26□□□□□ -0.13
CUZ1P53899 CCC1YLR220W 969 nt14.15□□□□□ -0.14
CUZ1P53899 YBR190WYBR190W 312 nt13.95□□□□□ -0.18
CUZ1P53899 RVS167YDR388W 1449 nt13.7□□□□□ -0.22
CUZ1P53899 ATS1YAL020C 1002 nt13.68□□□□□ -0.22
CUZ1P53899 RTC3YHR087W 336 nt13.65□□□□□ -0.22
CUZ1P53899 SCJ1YMR214W 1134 nt13.63□□□□□ -0.23
CUZ1P53899 PET122YER153C 765 nt13.6□□□□□ -0.23
CUZ1P53899 tP(UGG)O3tP(UGG)O3 72 nt13.54□□□□□ -0.24
CUZ1P53899 SCR1SCR1 522 nt13.53□□□□□ -0.24
CUZ1P53899 RRN5YLR141W 1092 nt13.21□□□□□ -0.29
CUZ1P53899 SHR5YOL110W 714 nt13.2□□□□□ -0.3
CUZ1P53899 YDJ1YNL064C 1230 nt13.11□□□□□ -0.31
CUZ1P53899 RSB1YOR049C 1065 nt12.97□□□□□ -0.33
CUZ1P53899 YER088W-BYER088W-B 147 nt12.96□□□□□ -0.33
CUZ1P53899 GAR1YHR089C 618 nt12.8□□□□□ -0.36
CUZ1P53899 URN1YPR152C 1398 nt12.78□□□□□ -0.36
CUZ1P53899 DEP1YAL013W 1218 nt12.77□□□□□ -0.37
CUZ1P53899 YGR139WYGR139W 339 nt12.75□□□□□ -0.37
CUZ1P53899 RPN10YHR200W 807 nt12.66□□□□□ -0.38
CUZ1P53899 PST2YDR032C 597 nt12.65□□□□□ -0.38
CUZ1P53899 YNL208WYNL208W 600 nt12.61□□□□□ -0.39
CUZ1P53899 PUT4YOR348C 1884 nt12.6□□□□□ -0.39
CUZ1P53899 Q0182Q0182 405 nt12.59□□□□□ -0.39
CUZ1P53899 OPI9YLR338W 858 nt12.59□□□□□ -0.39
CUZ1P53899 MOT3YMR070W 1473 nt12.59□□□□□ -0.39
CUZ1P53899 SAH1YER043C 1350 nt12.47□□□□□ -0.41
CUZ1P53899 ARE1YCR048W 1833 nt12.39□□□□□ -0.43
CUZ1P53899 TIR1YER011W 765 nt12.37□□□□□ -0.43
CUZ1P53899 PUN1YLR414C 792 nt12.25□□□□□ -0.45
CUZ1P53899 YHR049C-AYHR049C-A 297 nt12.24□□□□□ -0.45
CUZ1P53899 YKL097CYKL097C 411 nt12.21□□□□□ -0.45
CUZ1P53899 POA1YBR022W 534 nt12.21□□□□□ -0.45
CUZ1P53899 YJR018WYJR018W 363 nt12.2□□□□□ -0.46
CUZ1P53899 SSA1YAL005C 1929 nt12.19□□□□□ -0.46
CUZ1P53899 SSA3YBL075C 1950 nt12.15□□□□□ -0.46
CUZ1P53899 SHU1YHL006C 453 nt12.12□□□□□ -0.47
CUZ1P53899 PTC2YER089C 1395 nt12.06□□□□□ -0.48
CUZ1P53899 RPP2BYDR382W 333 nt12.01□□□□□ -0.49
CUZ1P53899 BUD23YCR047C 828 nt11.97□□□□□ -0.49
CUZ1P53899 NME1NME1 340 nt11.97□□□□□ -0.49
CUZ1P53899 YJR120WYJR120W 351 nt11.96□□□□□ -0.49
CUZ1P53899 SRB2YHR041C 633 nt11.94□□□□□ -0.5
CUZ1P53899 BSC6YOL137W 1494 nt11.94□□□□□ -0.5
CUZ1P53899 NAB2YGL122C 1578 nt11.92□□□□□ -0.5
CUZ1P53899 YAL037C-BYAL037C-B 975 nt11.9□□□□□ -0.5
CUZ1P53899 YGR021WYGR021W 873 nt11.82□□□□□ -0.52
CUZ1P53899 WWM1YFL010C 636 nt11.81□□□□□ -0.52
CUZ1P53899 INM2YDR287W 879 nt11.78□□□□□ -0.52
CUZ1P53899 DAL1YIR027C 1383 nt11.77□□□□□ -0.53
CUZ1P53899 BDH2YAL061W 1254 nt11.75□□□□□ -0.53
CUZ1P53899 FPR4YLR449W 1179 nt11.74□□□□□ -0.53
CUZ1P53899 HOM6YJR139C 1080 nt11.73□□□□□ -0.53
CUZ1P53899 FIS1YIL065C 468 nt11.72□□□□□ -0.53
CUZ1P53899 MNP1YGL068W 585 nt11.67□□□□□ -0.54
CUZ1P53899 YFL021C-AYFL021C-A 855 nt11.66□□□□□ -0.54
CUZ1P53899 YBL100CYBL100C 315 nt11.66□□□□□ -0.54
CUZ1P53899 YOR139CYOR139C 393 nt11.66□□□□□ -0.54
CUZ1P53899 PHO4YFR034C 939 nt11.64□□□□□ -0.55
CUZ1P53899 NPL3YDR432W 1245 nt11.61□□□□□ -0.55
CUZ1P53899 LSM3YLR438C-A 270 nt11.61□□□□□ -0.55
CUZ1P53899 RKM5YLR137W 1104 nt11.57□□□□□ -0.56
CUZ1P53899 YOL037CYOL037C 354 nt11.55□□□□□ -0.56
CUZ1P53899 TRM9YML014W 840 nt11.53□□□□□ -0.56
CUZ1P53899 FUN26YAL022C 1554 nt11.52□□□□□ -0.57
CUZ1P53899 CSM2YIL132C 642 nt11.5□□□□□ -0.57
CUZ1P53899 SPT5YML010W 3192 nt11.48□□□□□ -0.57
CUZ1P53899 CCT6YDR188W 1641 nt11.41□□□□□ -0.58
CUZ1P53899 YPS1YLR120C 1710 nt11.39□□□□□ -0.59
CUZ1P53899 ALF1YNL148C 765 nt11.38□□□□□ -0.59
CUZ1P53899 YDR095CYDR095C 411 nt11.33□□□□□ -0.6
CUZ1P53899 SUF2tP(AGG)C 72 nt11.33□□□□□ -0.6
CUZ1P53899 SUF10tP(AGG)N 72 nt11.33□□□□□ -0.6
CUZ1P53899 PAU21YOR394W 495 nt11.29□□□□□ -0.6
CUZ1P53899 PAU22YPL282C 495 nt11.29□□□□□ -0.6
CUZ1P53899 YHR165W-AYHR165W-A 312 nt11.28□□□□□ -0.6
CUZ1P53899 YLR281CYLR281C 468 nt11.24□□□□□ -0.61
CUZ1P53899 tM(CAU)CtM(CAU)C 72 nt11.22□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 37.2 ms