Protein–RNA interactions for Protein: P25043

PUP1, Proteasome subunit beta type-2, yeastyeast

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUP1P25043 NSR1YGR159C 1245 nt17.65■□□□□ 0.42
PUP1P25043 YML009W-BYML009W-B 477 nt17.22■□□□□ 0.35
PUP1P25043 NOP1YDL014W 984 nt16.51■□□□□ 0.23
PUP1P25043 Q0182Q0182 405 nt16.19■□□□□ 0.18
PUP1P25043 MDJ1YFL016C 1536 nt16.19■□□□□ 0.18
PUP1P25043 MOT3YMR070W 1473 nt15.96■□□□□ 0.14
PUP1P25043 YJL027CYJL027C 417 nt14.83□□□□□ -0.04
PUP1P25043 YKL036CYKL036C 393 nt14.75□□□□□ -0.05
PUP1P25043 SRX1YKL086W 384 nt14.48□□□□□ -0.09
PUP1P25043 Q0297Q0297 156 nt14.36□□□□□ -0.11
PUP1P25043 DBP2YNL112W 1641 nt14.19□□□□□ -0.14
PUP1P25043 YBR190WYBR190W 312 nt13.95□□□□□ -0.18
PUP1P25043 SSA3YBL075C 1950 nt13.67□□□□□ -0.22
PUP1P25043 YCR051WYCR051W 669 nt13.61□□□□□ -0.23
PUP1P25043 NME1NME1 340 nt13.58□□□□□ -0.24
PUP1P25043 RTC3YHR087W 336 nt13.5□□□□□ -0.25
PUP1P25043 TRN1tP(UGG)A 72 nt13.46□□□□□ -0.25
PUP1P25043 SUF9tP(UGG)F 72 nt13.46□□□□□ -0.25
PUP1P25043 SUF8tP(UGG)H 72 nt13.46□□□□□ -0.25
PUP1P25043 tP(UGG)LtP(UGG)L 72 nt13.46□□□□□ -0.25
PUP1P25043 SUF7tP(UGG)M 72 nt13.46□□□□□ -0.25
PUP1P25043 tP(UGG)N1tP(UGG)N1 72 nt13.46□□□□□ -0.25
PUP1P25043 tP(UGG)N2tP(UGG)N2 72 nt13.46□□□□□ -0.25
PUP1P25043 tP(UGG)O1tP(UGG)O1 72 nt13.46□□□□□ -0.25
PUP1P25043 SUF11tP(UGG)O2 72 nt13.46□□□□□ -0.25
PUP1P25043 SCS3YGL126W 1143 nt13.18□□□□□ -0.3
PUP1P25043 CCC1YLR220W 969 nt13.18□□□□□ -0.3
PUP1P25043 PUT4YOR348C 1884 nt13.16□□□□□ -0.3
PUP1P25043 RVS167YDR388W 1449 nt13.06□□□□□ -0.32
PUP1P25043 YGR139WYGR139W 339 nt13.05□□□□□ -0.32
PUP1P25043 SCJ1YMR214W 1134 nt13.02□□□□□ -0.33
PUP1P25043 RPP1BYDL130W 321 nt12.85□□□□□ -0.35
PUP1P25043 YOL085CYOL085C 342 nt12.83□□□□□ -0.36
PUP1P25043 ARE1YCR048W 1833 nt12.75□□□□□ -0.37
PUP1P25043 PKP1YIL042C 1185 nt12.64□□□□□ -0.39
PUP1P25043 POA1YBR022W 534 nt12.62□□□□□ -0.39
PUP1P25043 SHR5YOL110W 714 nt12.55□□□□□ -0.4
PUP1P25043 SPT5YML010W 3192 nt12.53□□□□□ -0.4
PUP1P25043 SAH1YER043C 1350 nt12.52□□□□□ -0.41
PUP1P25043 tP(UGG)O3tP(UGG)O3 72 nt12.51□□□□□ -0.41
PUP1P25043 YHR049C-AYHR049C-A 297 nt12.51□□□□□ -0.41
PUP1P25043 URN1YPR152C 1398 nt12.51□□□□□ -0.41
PUP1P25043 BSC6YOL137W 1494 nt12.48□□□□□ -0.41
PUP1P25043 OPI9YLR338W 858 nt12.48□□□□□ -0.41
PUP1P25043 PET122YER153C 765 nt12.36□□□□□ -0.43
PUP1P25043 SSA1YAL005C 1929 nt12.33□□□□□ -0.44
PUP1P25043 DEP1YAL013W 1218 nt12.31□□□□□ -0.44
PUP1P25043 CSM2YIL132C 642 nt12.29□□□□□ -0.44
PUP1P25043 SSA4YER103W 1929 nt12.21□□□□□ -0.46
PUP1P25043 RPN10YHR200W 807 nt12.15□□□□□ -0.46
PUP1P25043 YDJ1YNL064C 1230 nt12.13□□□□□ -0.47
PUP1P25043 BUD23YCR047C 828 nt12.1□□□□□ -0.47
PUP1P25043 YNL208WYNL208W 600 nt12.1□□□□□ -0.47
PUP1P25043 PUN1YLR414C 792 nt12.08□□□□□ -0.48
PUP1P25043 MET8YBR213W 825 nt12.05□□□□□ -0.48
PUP1P25043 PTC2YER089C 1395 nt12.02□□□□□ -0.49
PUP1P25043 CLB6YGR109C 1143 nt12□□□□□ -0.49
PUP1P25043 SCR1SCR1 522 nt11.99□□□□□ -0.49
PUP1P25043 NAB2YGL122C 1578 nt11.96□□□□□ -0.5
PUP1P25043 RRN5YLR141W 1092 nt11.92□□□□□ -0.5
PUP1P25043 YJR018WYJR018W 363 nt11.89□□□□□ -0.51
PUP1P25043 BDF1YLR399C 2061 nt11.88□□□□□ -0.51
PUP1P25043 GAR1YHR089C 618 nt11.87□□□□□ -0.51
PUP1P25043 PAU21YOR394W 495 nt11.85□□□□□ -0.51
PUP1P25043 PAU22YPL282C 495 nt11.85□□□□□ -0.51
PUP1P25043 FIS1YIL065C 468 nt11.82□□□□□ -0.52
PUP1P25043 MEP2YNL142W 1500 nt11.8□□□□□ -0.52
PUP1P25043 YJR120WYJR120W 351 nt11.74□□□□□ -0.53
PUP1P25043 TAT1YBR069C 1860 nt11.7□□□□□ -0.54
PUP1P25043 DAL1YIR027C 1383 nt11.7□□□□□ -0.54
PUP1P25043 YER088W-BYER088W-B 147 nt11.7□□□□□ -0.54
PUP1P25043 ARO7YPR060C 771 nt11.7□□□□□ -0.54
PUP1P25043 Q0010Q0010 387 nt11.64□□□□□ -0.55
PUP1P25043 ATS1YAL020C 1002 nt11.63□□□□□ -0.55
PUP1P25043 PHO4YFR034C 939 nt11.61□□□□□ -0.55
PUP1P25043 YPS1YLR120C 1710 nt11.6□□□□□ -0.55
PUP1P25043 FRE6YLL051C 2139 nt11.6□□□□□ -0.55
PUP1P25043 DCW1YKL046C 1350 nt11.59□□□□□ -0.55
PUP1P25043 YJR154WYJR154W 1041 nt11.57□□□□□ -0.56
PUP1P25043 FPR4YLR449W 1179 nt11.55□□□□□ -0.56
PUP1P25043 TIR1YER011W 765 nt11.54□□□□□ -0.56
PUP1P25043 INM2YDR287W 879 nt11.53□□□□□ -0.56
PUP1P25043 RSB1YOR049C 1065 nt11.46□□□□□ -0.57
PUP1P25043 YDR095CYDR095C 411 nt11.45□□□□□ -0.58
PUP1P25043 RPP2BYDR382W 333 nt11.45□□□□□ -0.58
PUP1P25043 YBR220CYBR220C 1683 nt11.44□□□□□ -0.58
PUP1P25043 YHR165W-AYHR165W-A 312 nt11.41□□□□□ -0.58
PUP1P25043 EMI2YDR516C 1503 nt11.4□□□□□ -0.58
PUP1P25043 YEL009C-AYEL009C-A 408 nt11.37□□□□□ -0.59
PUP1P25043 YBL100CYBL100C 315 nt11.34□□□□□ -0.59
PUP1P25043 SRB2YHR041C 633 nt11.33□□□□□ -0.6
PUP1P25043 YDL221WYDL221W 552 nt11.31□□□□□ -0.6
PUP1P25043 PTP1YDL230W 1008 nt11.29□□□□□ -0.6
PUP1P25043 YMR090WYMR090W 684 nt11.28□□□□□ -0.6
PUP1P25043 SDH1YKL148C 1923 nt11.28□□□□□ -0.6
PUP1P25043 CAC2YML102W 1407 nt11.26□□□□□ -0.61
PUP1P25043 PAB1YER165W 1734 nt11.24□□□□□ -0.61
PUP1P25043 FUN26YAL022C 1554 nt11.2□□□□□ -0.62
PUP1P25043 BDH2YAL061W 1254 nt11.2□□□□□ -0.62
PUP1P25043 REG2YBR050C 1017 nt11.2□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms