Protein–RNA interactions for Protein: P53046

ROM1, RHO1 GDP-GTP exchange protein 1, yeastyeast

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROM1P53046 YML009W-BYML009W-B 477 nt19.02■□□□□ 0.64
ROM1P53046 NSR1YGR159C 1245 nt18.93■□□□□ 0.62
ROM1P53046 NOP1YDL014W 984 nt18.51■□□□□ 0.55
ROM1P53046 YKL036CYKL036C 393 nt17.03■□□□□ 0.32
ROM1P53046 MDJ1YFL016C 1536 nt16.96■□□□□ 0.3
ROM1P53046 Q0297Q0297 156 nt16.16■□□□□ 0.18
ROM1P53046 SRX1YKL086W 384 nt16.14■□□□□ 0.17
ROM1P53046 YJL027CYJL027C 417 nt15.9■□□□□ 0.14
ROM1P53046 SCS3YGL126W 1143 nt15.45■□□□□ 0.06
ROM1P53046 YCR051WYCR051W 669 nt15.33■□□□□ 0.04
ROM1P53046 Q0182Q0182 405 nt15.26■□□□□ 0.03
ROM1P53046 MOT3YMR070W 1473 nt15.09■□□□□ 0.01
ROM1P53046 DBP2YNL112W 1641 nt14.83□□□□□ -0.04
ROM1P53046 YOL085CYOL085C 342 nt14.73□□□□□ -0.05
ROM1P53046 YBR190WYBR190W 312 nt14.61□□□□□ -0.07
ROM1P53046 TRN1tP(UGG)A 72 nt14.6□□□□□ -0.07
ROM1P53046 SUF9tP(UGG)F 72 nt14.6□□□□□ -0.07
ROM1P53046 SUF8tP(UGG)H 72 nt14.6□□□□□ -0.07
ROM1P53046 tP(UGG)LtP(UGG)L 72 nt14.6□□□□□ -0.07
ROM1P53046 SUF7tP(UGG)M 72 nt14.6□□□□□ -0.07
ROM1P53046 tP(UGG)N1tP(UGG)N1 72 nt14.6□□□□□ -0.07
ROM1P53046 tP(UGG)N2tP(UGG)N2 72 nt14.6□□□□□ -0.07
ROM1P53046 tP(UGG)O1tP(UGG)O1 72 nt14.6□□□□□ -0.07
ROM1P53046 SUF11tP(UGG)O2 72 nt14.6□□□□□ -0.07
ROM1P53046 SCJ1YMR214W 1134 nt14.54□□□□□ -0.08
ROM1P53046 PKP1YIL042C 1185 nt14.51□□□□□ -0.09
ROM1P53046 RPP1BYDL130W 321 nt14.5□□□□□ -0.09
ROM1P53046 CCC1YLR220W 969 nt14.48□□□□□ -0.09
ROM1P53046 RTC3YHR087W 336 nt14.32□□□□□ -0.12
ROM1P53046 RVS167YDR388W 1449 nt14.02□□□□□ -0.16
ROM1P53046 ATS1YAL020C 1002 nt13.95□□□□□ -0.18
ROM1P53046 SSA3YBL075C 1950 nt13.91□□□□□ -0.18
ROM1P53046 PET122YER153C 765 nt13.84□□□□□ -0.19
ROM1P53046 tP(UGG)O3tP(UGG)O3 72 nt13.81□□□□□ -0.2
ROM1P53046 SCR1SCR1 522 nt13.74□□□□□ -0.21
ROM1P53046 PUT4YOR348C 1884 nt13.58□□□□□ -0.24
ROM1P53046 SHR5YOL110W 714 nt13.5□□□□□ -0.25
ROM1P53046 RRN5YLR141W 1092 nt13.45□□□□□ -0.26
ROM1P53046 YDJ1YNL064C 1230 nt13.37□□□□□ -0.27
ROM1P53046 ARE1YCR048W 1833 nt13.19□□□□□ -0.3
ROM1P53046 RSB1YOR049C 1065 nt13.19□□□□□ -0.3
ROM1P53046 YER088W-BYER088W-B 147 nt13.18□□□□□ -0.3
ROM1P53046 NME1NME1 340 nt13.18□□□□□ -0.3
ROM1P53046 URN1YPR152C 1398 nt13.18□□□□□ -0.3
ROM1P53046 POA1YBR022W 534 nt13.17□□□□□ -0.3
ROM1P53046 DEP1YAL013W 1218 nt13.12□□□□□ -0.31
ROM1P53046 SAH1YER043C 1350 nt13.11□□□□□ -0.31
ROM1P53046 GAR1YHR089C 618 nt13.08□□□□□ -0.32
ROM1P53046 YHR049C-AYHR049C-A 297 nt13.06□□□□□ -0.32
ROM1P53046 OPI9YLR338W 858 nt13.06□□□□□ -0.32
ROM1P53046 YGR139WYGR139W 339 nt13□□□□□ -0.33
ROM1P53046 RPN10YHR200W 807 nt12.97□□□□□ -0.33
ROM1P53046 BSC6YOL137W 1494 nt12.96□□□□□ -0.34
ROM1P53046 YNL208WYNL208W 600 nt12.93□□□□□ -0.34
ROM1P53046 PST2YDR032C 597 nt12.79□□□□□ -0.36
ROM1P53046 BUD23YCR047C 828 nt12.76□□□□□ -0.37
ROM1P53046 PUN1YLR414C 792 nt12.71□□□□□ -0.37
ROM1P53046 YKL097CYKL097C 411 nt12.7□□□□□ -0.38
ROM1P53046 SPT5YML010W 3192 nt12.67□□□□□ -0.38
ROM1P53046 TIR1YER011W 765 nt12.64□□□□□ -0.39
ROM1P53046 PTC2YER089C 1395 nt12.63□□□□□ -0.39
ROM1P53046 YJR018WYJR018W 363 nt12.54□□□□□ -0.4
ROM1P53046 NAB2YGL122C 1578 nt12.53□□□□□ -0.4
ROM1P53046 SSA4YER103W 1929 nt12.46□□□□□ -0.42
ROM1P53046 SSA1YAL005C 1929 nt12.46□□□□□ -0.42
ROM1P53046 RPP2BYDR382W 333 nt12.31□□□□□ -0.44
ROM1P53046 FPR4YLR449W 1179 nt12.29□□□□□ -0.44
ROM1P53046 SHU1YHL006C 453 nt12.28□□□□□ -0.44
ROM1P53046 YJR120WYJR120W 351 nt12.28□□□□□ -0.44
ROM1P53046 DAL1YIR027C 1383 nt12.27□□□□□ -0.45
ROM1P53046 FIS1YIL065C 468 nt12.25□□□□□ -0.45
ROM1P53046 MEP2YNL142W 1500 nt12.21□□□□□ -0.46
ROM1P53046 SRB2YHR041C 633 nt12.2□□□□□ -0.46
ROM1P53046 INM2YDR287W 879 nt12.18□□□□□ -0.46
ROM1P53046 PHO4YFR034C 939 nt12.15□□□□□ -0.46
ROM1P53046 CSM2YIL132C 642 nt12.1□□□□□ -0.47
ROM1P53046 YAL037C-BYAL037C-B 975 nt12.1□□□□□ -0.47
ROM1P53046 WWM1YFL010C 636 nt12.07□□□□□ -0.48
ROM1P53046 YPS1YLR120C 1710 nt12.06□□□□□ -0.48
ROM1P53046 BDF1YLR399C 2061 nt12.04□□□□□ -0.48
ROM1P53046 BDH2YAL061W 1254 nt12.03□□□□□ -0.48
ROM1P53046 YGR021WYGR021W 873 nt12.02□□□□□ -0.49
ROM1P53046 YHR165W-AYHR165W-A 312 nt12.02□□□□□ -0.49
ROM1P53046 DCW1YKL046C 1350 nt11.99□□□□□ -0.49
ROM1P53046 YBL100CYBL100C 315 nt11.98□□□□□ -0.49
ROM1P53046 YOR139CYOR139C 393 nt11.97□□□□□ -0.49
ROM1P53046 HOM6YJR139C 1080 nt11.94□□□□□ -0.5
ROM1P53046 YDR095CYDR095C 411 nt11.9□□□□□ -0.5
ROM1P53046 YFL021C-AYFL021C-A 855 nt11.89□□□□□ -0.51
ROM1P53046 MNP1YGL068W 585 nt11.87□□□□□ -0.51
ROM1P53046 LSM3YLR438C-A 270 nt11.87□□□□□ -0.51
ROM1P53046 YMR090WYMR090W 684 nt11.87□□□□□ -0.51
ROM1P53046 TAT1YBR069C 1860 nt11.86□□□□□ -0.51
ROM1P53046 EMI2YDR516C 1503 nt11.85□□□□□ -0.51
ROM1P53046 NPL3YDR432W 1245 nt11.83□□□□□ -0.52
ROM1P53046 TRM9YML014W 840 nt11.83□□□□□ -0.52
ROM1P53046 FUN26YAL022C 1554 nt11.83□□□□□ -0.52
ROM1P53046 ALF1YNL148C 765 nt11.78□□□□□ -0.52
ROM1P53046 PAC11YDR488C 1602 nt11.78□□□□□ -0.52
ROM1P53046 RKM5YLR137W 1104 nt11.77□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms