Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 NSR1YGR159C 1245 nt17.5■□□□□ 0.39
TY1A-MR1Q04215 YML009W-BYML009W-B 477 nt17.19■□□□□ 0.34
TY1A-MR1Q04215 NOP1YDL014W 984 nt16.51■□□□□ 0.23
TY1A-MR1Q04215 MDJ1YFL016C 1536 nt16.01■□□□□ 0.15
TY1A-MR1Q04215 YKL036CYKL036C 393 nt14.79□□□□□ -0.04
TY1A-MR1Q04215 YJL027CYJL027C 417 nt14.72□□□□□ -0.05
TY1A-MR1Q04215 SRX1YKL086W 384 nt14.43□□□□□ -0.1
TY1A-MR1Q04215 Q0297Q0297 156 nt14.3□□□□□ -0.12
TY1A-MR1Q04215 DBP2YNL112W 1641 nt13.97□□□□□ -0.17
TY1A-MR1Q04215 YBR190WYBR190W 312 nt13.78□□□□□ -0.2
TY1A-MR1Q04215 YCR051WYCR051W 669 nt13.64□□□□□ -0.23
TY1A-MR1Q04215 RTC3YHR087W 336 nt13.42□□□□□ -0.26
TY1A-MR1Q04215 TRN1tP(UGG)A 72 nt13.35□□□□□ -0.27
TY1A-MR1Q04215 SUF9tP(UGG)F 72 nt13.35□□□□□ -0.27
TY1A-MR1Q04215 SUF8tP(UGG)H 72 nt13.35□□□□□ -0.27
TY1A-MR1Q04215 tP(UGG)LtP(UGG)L 72 nt13.35□□□□□ -0.27
TY1A-MR1Q04215 SUF7tP(UGG)M 72 nt13.35□□□□□ -0.27
TY1A-MR1Q04215 tP(UGG)N1tP(UGG)N1 72 nt13.35□□□□□ -0.27
TY1A-MR1Q04215 tP(UGG)N2tP(UGG)N2 72 nt13.35□□□□□ -0.27
TY1A-MR1Q04215 tP(UGG)O1tP(UGG)O1 72 nt13.35□□□□□ -0.27
TY1A-MR1Q04215 SUF11tP(UGG)O2 72 nt13.35□□□□□ -0.27
TY1A-MR1Q04215 SCS3YGL126W 1143 nt13.22□□□□□ -0.29
TY1A-MR1Q04215 SSA3YBL075C 1950 nt13.21□□□□□ -0.29
TY1A-MR1Q04215 CCC1YLR220W 969 nt13.17□□□□□ -0.3
TY1A-MR1Q04215 RVS167YDR388W 1449 nt13.03□□□□□ -0.32
TY1A-MR1Q04215 YGR139WYGR139W 339 nt12.9□□□□□ -0.34
TY1A-MR1Q04215 PUT4YOR348C 1884 nt12.89□□□□□ -0.35
TY1A-MR1Q04215 SCJ1YMR214W 1134 nt12.88□□□□□ -0.35
TY1A-MR1Q04215 RPP1BYDL130W 321 nt12.83□□□□□ -0.36
TY1A-MR1Q04215 YOL085CYOL085C 342 nt12.82□□□□□ -0.36
TY1A-MR1Q04215 PKP1YIL042C 1185 nt12.67□□□□□ -0.38
TY1A-MR1Q04215 ARE1YCR048W 1833 nt12.51□□□□□ -0.41
TY1A-MR1Q04215 SHR5YOL110W 714 nt12.46□□□□□ -0.41
TY1A-MR1Q04215 tP(UGG)O3tP(UGG)O3 72 nt12.45□□□□□ -0.42
TY1A-MR1Q04215 MOT3YMR070W 1473 nt12.43□□□□□ -0.42
TY1A-MR1Q04215 Q0182Q0182 405 nt12.42□□□□□ -0.42
TY1A-MR1Q04215 POA1YBR022W 534 nt12.42□□□□□ -0.42
TY1A-MR1Q04215 URN1YPR152C 1398 nt12.41□□□□□ -0.42
TY1A-MR1Q04215 SAH1YER043C 1350 nt12.36□□□□□ -0.43
TY1A-MR1Q04215 YHR049C-AYHR049C-A 297 nt12.35□□□□□ -0.43
TY1A-MR1Q04215 OPI9YLR338W 858 nt12.33□□□□□ -0.44
TY1A-MR1Q04215 PET122YER153C 765 nt12.32□□□□□ -0.44
TY1A-MR1Q04215 BSC6YOL137W 1494 nt12.27□□□□□ -0.45
TY1A-MR1Q04215 DEP1YAL013W 1218 nt12.25□□□□□ -0.45
TY1A-MR1Q04215 RPN10YHR200W 807 nt12.12□□□□□ -0.47
TY1A-MR1Q04215 SPT5YML010W 3192 nt12.06□□□□□ -0.48
TY1A-MR1Q04215 YDJ1YNL064C 1230 nt12.06□□□□□ -0.48
TY1A-MR1Q04215 SCR1SCR1 522 nt12.05□□□□□ -0.48
TY1A-MR1Q04215 YNL208WYNL208W 600 nt12.02□□□□□ -0.49
TY1A-MR1Q04215 BUD23YCR047C 828 nt12□□□□□ -0.49
TY1A-MR1Q04215 PUN1YLR414C 792 nt11.97□□□□□ -0.49
TY1A-MR1Q04215 NME1NME1 340 nt11.97□□□□□ -0.49
TY1A-MR1Q04215 RRN5YLR141W 1092 nt11.9□□□□□ -0.5
TY1A-MR1Q04215 PTC2YER089C 1395 nt11.9□□□□□ -0.5
TY1A-MR1Q04215 SSA4YER103W 1929 nt11.86□□□□□ -0.51
TY1A-MR1Q04215 GAR1YHR089C 618 nt11.85□□□□□ -0.51
TY1A-MR1Q04215 NAB2YGL122C 1578 nt11.81□□□□□ -0.52
TY1A-MR1Q04215 YJR018WYJR018W 363 nt11.8□□□□□ -0.52
TY1A-MR1Q04215 YER088W-BYER088W-B 147 nt11.67□□□□□ -0.54
TY1A-MR1Q04215 ATS1YAL020C 1002 nt11.67□□□□□ -0.54
TY1A-MR1Q04215 FIS1YIL065C 468 nt11.63□□□□□ -0.55
TY1A-MR1Q04215 CSM2YIL132C 642 nt11.59□□□□□ -0.55
TY1A-MR1Q04215 DAL1YIR027C 1383 nt11.57□□□□□ -0.56
TY1A-MR1Q04215 MEP2YNL142W 1500 nt11.57□□□□□ -0.56
TY1A-MR1Q04215 YJR120WYJR120W 351 nt11.54□□□□□ -0.56
TY1A-MR1Q04215 FPR4YLR449W 1179 nt11.51□□□□□ -0.57
TY1A-MR1Q04215 RSB1YOR049C 1065 nt11.51□□□□□ -0.57
TY1A-MR1Q04215 TIR1YER011W 765 nt11.49□□□□□ -0.57
TY1A-MR1Q04215 PHO4YFR034C 939 nt11.47□□□□□ -0.57
TY1A-MR1Q04215 BDF1YLR399C 2061 nt11.46□□□□□ -0.57
TY1A-MR1Q04215 SSA1YAL005C 1929 nt11.45□□□□□ -0.58
TY1A-MR1Q04215 INM2YDR287W 879 nt11.43□□□□□ -0.58
TY1A-MR1Q04215 RPP2BYDR382W 333 nt11.43□□□□□ -0.58
TY1A-MR1Q04215 YPS1YLR120C 1710 nt11.41□□□□□ -0.58
TY1A-MR1Q04215 PAU21YOR394W 495 nt11.39□□□□□ -0.59
TY1A-MR1Q04215 PAU22YPL282C 495 nt11.39□□□□□ -0.59
TY1A-MR1Q04215 DCW1YKL046C 1350 nt11.37□□□□□ -0.59
TY1A-MR1Q04215 YHR165W-AYHR165W-A 312 nt11.31□□□□□ -0.6
TY1A-MR1Q04215 TAT1YBR069C 1860 nt11.31□□□□□ -0.6
TY1A-MR1Q04215 ARO7YPR060C 771 nt11.29□□□□□ -0.6
TY1A-MR1Q04215 YDR095CYDR095C 411 nt11.28□□□□□ -0.6
TY1A-MR1Q04215 YBL100CYBL100C 315 nt11.26□□□□□ -0.61
TY1A-MR1Q04215 EMI2YDR516C 1503 nt11.21□□□□□ -0.61
TY1A-MR1Q04215 PAM17YKR065C 594 nt11.19□□□□□ -0.62
TY1A-MR1Q04215 SRB2YHR041C 633 nt11.17□□□□□ -0.62
TY1A-MR1Q04215 YMR090WYMR090W 684 nt11.17□□□□□ -0.62
TY1A-MR1Q04215 YBR220CYBR220C 1683 nt11.17□□□□□ -0.62
TY1A-MR1Q04215 BDH2YAL061W 1254 nt11.13□□□□□ -0.63
TY1A-MR1Q04215 FUN26YAL022C 1554 nt11.11□□□□□ -0.63
TY1A-MR1Q04215 YDL221WYDL221W 552 nt11.09□□□□□ -0.63
TY1A-MR1Q04215 PTP1YDL230W 1008 nt11.06□□□□□ -0.64
TY1A-MR1Q04215 CAC2YML102W 1407 nt11.05□□□□□ -0.64
TY1A-MR1Q04215 RPP2AYOL039W 321 nt11.05□□□□□ -0.64
TY1A-MR1Q04215 SDH1YKL148C 1923 nt11.05□□□□□ -0.64
TY1A-MR1Q04215 ALF1YNL148C 765 nt11.04□□□□□ -0.64
TY1A-MR1Q04215 REG2YBR050C 1017 nt11.01□□□□□ -0.65
TY1A-MR1Q04215 VAR1Q0140 1197 nt11□□□□□ -0.65
TY1A-MR1Q04215 TRM9YML014W 840 nt10.98□□□□□ -0.65
TY1A-MR1Q04215 CCT6YDR188W 1641 nt10.92□□□□□ -0.66
TY1A-MR1Q04215 YDR509WYDR509W 348 nt10.92□□□□□ -0.66
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms