Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RNF25Q96BH1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.57■■□□□ 1.84
RNF25Q96BH1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.57■■□□□ 1.84
RNF25Q96BH1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
RNF25Q96BH1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF25Q96BH1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.56■■□□□ 1.84
RNF25Q96BH1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF25Q96BH1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
RNF25Q96BH1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
RNF25Q96BH1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
RNF25Q96BH1 WHAMMP2-203ENST00000563942 1603 ntBASIC26.55■■□□□ 1.84
RNF25Q96BH1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF25Q96BH1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF25Q96BH1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.55■■□□□ 1.84
RNF25Q96BH1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.55■■□□□ 1.84
RNF25Q96BH1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF25Q96BH1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF25Q96BH1 AC087741.3-201ENST00000624270 1347 ntBASIC26.53■■□□□ 1.84
RNF25Q96BH1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF25Q96BH1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.53■■□□□ 1.84
RNF25Q96BH1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF25Q96BH1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF25Q96BH1 AL162393.1-201ENST00000437852 946 ntBASIC26.52■■□□□ 1.84
RNF25Q96BH1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.52■■□□□ 1.84
RNF25Q96BH1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
RNF25Q96BH1 LINC01003-201ENST00000564834 1764 ntBASIC26.51■■□□□ 1.83
RNF25Q96BH1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.51■■□□□ 1.83
RNF25Q96BH1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF25Q96BH1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF25Q96BH1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RNF25Q96BH1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RNF25Q96BH1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.5■■□□□ 1.83
RNF25Q96BH1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.5■■□□□ 1.83
RNF25Q96BH1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF25Q96BH1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF25Q96BH1 AP002414.2-202ENST00000590929 1450 ntBASIC26.49■■□□□ 1.83
RNF25Q96BH1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF25Q96BH1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.49■■□□□ 1.83
RNF25Q96BH1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
RNF25Q96BH1 LINC00273-201ENST00000539813 1452 ntBASIC26.49■■□□□ 1.83
RNF25Q96BH1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RNF25Q96BH1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
RNF25Q96BH1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF25Q96BH1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.47■■□□□ 1.83
RNF25Q96BH1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
RNF25Q96BH1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.46■■□□□ 1.83
RNF25Q96BH1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.46■■□□□ 1.83
RNF25Q96BH1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RNF25Q96BH1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
RNF25Q96BH1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.45■■□□□ 1.82
RNF25Q96BH1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
RNF25Q96BH1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RNF25Q96BH1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.44■■□□□ 1.82
RNF25Q96BH1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RNF25Q96BH1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
RNF25Q96BH1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RNF25Q96BH1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.43■■□□□ 1.82
RNF25Q96BH1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.43■■□□□ 1.82
RNF25Q96BH1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RNF25Q96BH1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RNF25Q96BH1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF25Q96BH1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF25Q96BH1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.42■■□□□ 1.82
RNF25Q96BH1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF25Q96BH1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
RNF25Q96BH1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF25Q96BH1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
RNF25Q96BH1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.4■■□□□ 1.82
RNF25Q96BH1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
RNF25Q96BH1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
RNF25Q96BH1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RNF25Q96BH1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RNF25Q96BH1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.39■■□□□ 1.82
RNF25Q96BH1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RNF25Q96BH1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.38■■□□□ 1.81
RNF25Q96BH1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.38■■□□□ 1.81
RNF25Q96BH1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
RNF25Q96BH1 AC044849.2-201ENST00000606596 710 ntBASIC26.38■■□□□ 1.81
RNF25Q96BH1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
RNF25Q96BH1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF25Q96BH1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
RNF25Q96BH1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.37■■□□□ 1.81
RNF25Q96BH1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.36■■□□□ 1.81
RNF25Q96BH1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
RNF25Q96BH1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF25Q96BH1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RNF25Q96BH1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF25Q96BH1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF25Q96BH1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF25Q96BH1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF25Q96BH1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RNF25Q96BH1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.35■■□□□ 1.81
RNF25Q96BH1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF25Q96BH1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF25Q96BH1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF25Q96BH1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF25Q96BH1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
RNF25Q96BH1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF25Q96BH1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RNF25Q96BH1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms