Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.7■□□□□ 0.261e-7■■□□□ 12.7
SRSF1Q07955 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.231e-7■■□□□ 12.7
SRSF1Q07955 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.071e-7■■□□□ 12.7
SRSF1Q07955 SPHK1-209ENST00000591762 2502 ntTSL 213.63□□□□□ -0.231e-7■■□□□ 12.7
SRSF1Q07955 USP32-208ENST00000589335 691 ntTSL 518.76■□□□□ 0.594e-7■■□□□ 12.7
SRSF1Q07955 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.034e-7■■□□□ 12.7
SRSF1Q07955 USP32-207ENST00000588898 578 ntTSL 511.48□□□□□ -0.574e-7■■□□□ 12.7
SRSF1Q07955 USP32-202ENST00000393003 1868 ntTSL 1 (best) BASIC10.16□□□□□ -0.784e-7■■□□□ 12.7
SRSF1Q07955 USP32-210ENST00000589761 430 ntTSL 29.67□□□□□ -0.864e-7■■□□□ 12.7
SRSF1Q07955 USP32-211ENST00000590133 2563 ntTSL 28.96□□□□□ -0.974e-7■■□□□ 12.7
SRSF1Q07955 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.25e-7■■□□□ 12.7
SRSF1Q07955 NELFCD-201ENST00000460601 2137 ntTSL 1 (best)14.19□□□□□ -0.145e-7■■□□□ 12.7
SRSF1Q07955 NELFCD-205ENST00000477741 2070 ntTSL 1 (best)12.23□□□□□ -0.455e-7■■□□□ 12.7
SRSF1Q07955 NELFCD-204ENST00000474543 2047 ntTSL 511.6□□□□□ -0.555e-7■■□□□ 12.7
SRSF1Q07955 UBE2D3-231ENST00000513098 702 ntTSL 312.11□□□□□ -0.474e-10■■□□□ 12.7
SRSF1Q07955 UBE2D3-212ENST00000502563 680 ntTSL 39.74□□□□□ -0.854e-10■■□□□ 12.7
SRSF1Q07955 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC7.52□□□□□ -1.214e-10■■□□□ 12.7
SRSF1Q07955 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.097e-7■■□□□ 12.7
SRSF1Q07955 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.257e-7■■□□□ 12.7
SRSF1Q07955 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.37e-7■■□□□ 12.7
SRSF1Q07955 MFSD9-207ENST00000462099 335 ntTSL 319.59■□□□□ 0.734e-7■■□□□ 12.7
SRSF1Q07955 MFSD9-203ENST00000421966 548 ntTSL 419.56■□□□□ 0.724e-7■■□□□ 12.7
SRSF1Q07955 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.683e-10■■□□□ 12.7
SRSF1Q07955 FARP1-229ENST00000600190 566 ntTSL 318.56■□□□□ 0.561e-13■■□□□ 12.7
SRSF1Q07955 MFSD9-202ENST00000411991 1183 ntTSL 1 (best)17.21■□□□□ 0.354e-7■■□□□ 12.7
SRSF1Q07955 ANO6-206ENST00000550630 835 ntTSL 316.98■□□□□ 0.314e-7■■□□□ 12.7
SRSF1Q07955 RECQL4-208ENST00000534626 1165 ntTSL 516.29■□□□□ 0.24e-7■■□□□ 12.7
SRSF1Q07955 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.194e-7■■□□□ 12.7
SRSF1Q07955 MFSD9-205ENST00000437075 2440 ntTSL 516.2■□□□□ 0.184e-7■■□□□ 12.7
SRSF1Q07955 MICAL3-215ENST00000578984 569 ntTSL 315.78■□□□□ 0.124e-7■■□□□ 12.7
SRSF1Q07955 SAMD10-204ENST00000498830 823 ntTSL 215.23■□□□□ 0.034e-7■■□□□ 12.7
SRSF1Q07955 SLC5A9-204ENST00000441260 1046 ntTSL 215.22■□□□□ 0.034e-7■■□□□ 12.7
SRSF1Q07955 MICAL3-212ENST00000498573 593 ntTSL 313.4□□□□□ -0.264e-7■■□□□ 12.7
SRSF1Q07955 MFSD9-206ENST00000438943 2990 ntTSL 512.89□□□□□ -0.354e-7■■□□□ 12.7
SRSF1Q07955 ANO6-204ENST00000426898 2780 ntTSL 212.13□□□□□ -0.474e-7■■□□□ 12.7
SRSF1Q07955 SLC5A9-202ENST00000425816 1950 ntTSL 1 (best)12.01□□□□□ -0.494e-7■■□□□ 12.7
SRSF1Q07955 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.514e-7■■□□□ 12.7
SRSF1Q07955 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.654e-7■■□□□ 12.7
SRSF1Q07955 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.794e-7■■□□□ 12.7
SRSF1Q07955 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.814e-7■■□□□ 12.7
SRSF1Q07955 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.864e-7■■□□□ 12.7
SRSF1Q07955 MFSD9-201ENST00000258436 4049 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.044e-7■■□□□ 12.7
SRSF1Q07955 SLC5A9-206ENST00000493837 3769 ntTSL 28.06□□□□□ -1.124e-7■■□□□ 12.7
SRSF1Q07955 SLC5A9-201ENST00000236495 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.124e-7■■□□□ 12.7
SRSF1Q07955 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.464e-7■■□□□ 12.7
SRSF1Q07955 SF3B2-209ENST00000530322 1163 ntTSL 515.62■□□□□ 0.092e-9■■□□□ 12.7
SRSF1Q07955 SF3B2-214ENST00000533595 1081 ntTSL 513.12□□□□□ -0.312e-9■■□□□ 12.7
SRSF1Q07955 SF3B2-204ENST00000525207 493 ntTSL 29.03□□□□□ -0.962e-9■■□□□ 12.7
SRSF1Q07955 CROCCP2-207ENST00000640476 1750 ntTSL 517.68■□□□□ 0.426e-10■■□□□ 12.7
SRSF1Q07955 CROCCP2-206ENST00000639594 2175 ntTSL 1 (best)14.6□□□□□ -0.076e-10■■□□□ 12.7
SRSF1Q07955 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.12e-6■■□□□ 12.7
SRSF1Q07955 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.35□□□□□ -0.112e-6■■□□□ 12.7
SRSF1Q07955 RCC1-207ENST00000427469 903 ntTSL 512.51□□□□□ -0.413e-23■■□□□ 12.7
SRSF1Q07955 RCC1-210ENST00000434290 1070 ntTSL 512.15□□□□□ -0.463e-23■■□□□ 12.7
SRSF1Q07955 SNHG3-202ENST00000437681 2614 ntTSL 2 BASIC10.21□□□□□ -0.773e-23■■□□□ 12.7
SRSF1Q07955 RCC1-203ENST00000373833 2844 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.993e-23■■□□□ 12.7
SRSF1Q07955 RCC1-204ENST00000398958 2715 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -13e-23■■□□□ 12.7
SRSF1Q07955 SNHG3-201ENST00000413987 2201 ntTSL 1 (best)8.15□□□□□ -1.13e-23■■□□□ 12.7
SRSF1Q07955 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.176e-12■■□□□ 12.7
SRSF1Q07955 KAT2A-202ENST00000465682 2990 ntTSL 59.68□□□□□ -0.866e-12■■□□□ 12.7
SRSF1Q07955 ACAA1-207ENST00000440176 1328 ntTSL 219.14■□□□□ 0.651e-6■■□□□ 12.7
SRSF1Q07955 ACAA1-206ENST00000423611 877 ntTSL 318.67■□□□□ 0.581e-6■■□□□ 12.7
SRSF1Q07955 ACAA1-208ENST00000447223 915 ntTSL 316.94■□□□□ 0.31e-6■■□□□ 12.7
SRSF1Q07955 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.12e-9■■□□□ 12.7
SRSF1Q07955 PAH-213ENST00000551988 584 ntTSL 36.28□□□□□ -1.42e-9■■□□□ 12.7
SRSF1Q07955 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.24□□□□□ -1.412e-9■■□□□ 12.7
SRSF1Q07955 PAH-207ENST00000549111 1252 ntTSL 1 (best)5.3□□□□□ -1.562e-9■■□□□ 12.7
SRSF1Q07955 PAH-210ENST00000550978 652 ntTSL 23.84□□□□□ -1.792e-9■■□□□ 12.7
SRSF1Q07955 ARFGAP1-217ENST00000523114 579 ntTSL 415.53■□□□□ 0.082e-6■■□□□ 12.7
SRSF1Q07955 ARFGAP1-216ENST00000522959 556 ntTSL 214.91□□□□□ -0.022e-6■■□□□ 12.7
SRSF1Q07955 RINT1-206ENST00000493041 563 ntTSL 514.64□□□□□ -0.074e-13■■□□□ 12.7
SRSF1Q07955 RINT1-205ENST00000482041 578 ntTSL 413.72□□□□□ -0.214e-13■■□□□ 12.7
SRSF1Q07955 RINT1-202ENST00000467392 837 ntTSL 313.08□□□□□ -0.324e-13■■□□□ 12.7
SRSF1Q07955 RINT1-201ENST00000257700 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.844e-13■■□□□ 12.7
SRSF1Q07955 RINT1-208ENST00000497979 2627 ntTSL 58.83□□□□□ -14e-13■■□□□ 12.7
SRSF1Q07955 CIRBP-209ENST00000586555 716 ntTSL 219.61■□□□□ 0.731e-11■■□□□ 12.7
SRSF1Q07955 CIRBP-220ENST00000588917 1087 ntTSL 217.83■□□□□ 0.441e-11■■□□□ 12.7
SRSF1Q07955 CIRBP-227ENST00000590188 361 ntTSL 316.93■□□□□ 0.31e-11■■□□□ 12.7
SRSF1Q07955 CIRBP-245ENST00000621399 1044 ntTSL 1 (best)16.74■□□□□ 0.271e-11■■□□□ 12.7
SRSF1Q07955 CIRBP-203ENST00000444172 584 ntTSL 316■□□□□ 0.151e-11■■□□□ 12.7
SRSF1Q07955 MAN2C1-218ENST00000563794 818 ntTSL 315.66■□□□□ 0.12e-6■■□□□ 12.6
SRSF1Q07955 MAPK12-204ENST00000467891 2019 ntTSL 523.24■■□□□ 1.312e-7■■□□□ 12.6
SRSF1Q07955 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.152e-7■■□□□ 12.6
SRSF1Q07955 ZNF664-208ENST00000540009 753 ntTSL 321.06■□□□□ 0.962e-7■■□□□ 12.6
SRSF1Q07955 ZNF664-210ENST00000541448 567 ntTSL 320.83■□□□□ 0.932e-7■■□□□ 12.6
SRSF1Q07955 ZNF664-212ENST00000542820 802 ntTSL 1 (best)20.49■□□□□ 0.872e-7■■□□□ 12.6
SRSF1Q07955 WDR13-212ENST00000498631 859 ntTSL 220.06■□□□□ 0.87e-8■■□□□ 12.6
SRSF1Q07955 WDR13-208ENST00000486125 936 ntTSL 220.06■□□□□ 0.87e-8■■□□□ 12.6
SRSF1Q07955 ZNF664-211ENST00000542493 591 ntTSL 420■□□□□ 0.792e-7■■□□□ 12.6
SRSF1Q07955 WDR13-205ENST00000472440 430 ntTSL 219.28■□□□□ 0.682e-7■■□□□ 12.6
SRSF1Q07955 MAPK12-206ENST00000488504 1785 ntTSL 518.82■□□□□ 0.62e-7■■□□□ 12.6
SRSF1Q07955 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.51■□□□□ 0.552e-7■■□□□ 12.6
SRSF1Q07955 ZNF664-214ENST00000546098 474 ntTSL 418.39■□□□□ 0.532e-7■■□□□ 12.6
SRSF1Q07955 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.12■□□□□ 0.331e-8■■□□□ 12.6
SRSF1Q07955 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.291e-8■■□□□ 12.6
SRSF1Q07955 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.242e-7■■□□□ 12.6
SRSF1Q07955 WDR13-204ENST00000470124 437 ntTSL 315.93■□□□□ 0.142e-7■■□□□ 12.6
SRSF1Q07955 RFLNA-203ENST00000389727 2385 ntAPPRIS P2 TSL 515.79■□□□□ 0.122e-7■■□□□ 12.6
SRSF1Q07955 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.027e-8■■□□□ 12.6
SRSF1Q07955 ZNF664-213ENST00000543017 455 ntTSL 514.75□□□□□ -0.052e-7■■□□□ 12.6
Retrieved 100 of 14,836 protein–RNA pairs in 219.5 ms