RNA–Protein interactions for RNA: ENST00000373833.10

RCC1-203, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-203ENST00000373833 NISCHQ9Y2I1 1504 aa23.32■■□□□ 1.32
RCC1-203ENST00000373833 DCAF8L2P0C7V8 631 aa20.37■□□□□ 0.85
RCC1-203ENST00000373833 ABCC9O60706 1549 aa20.03■□□□□ 0.8
RCC1-203ENST00000373833 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
RCC1-203ENST00000373833 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
RCC1-203ENST00000373833 ZCCHC6Q5VYS8 1495 aaKnown RBP19.46■□□□□ 0.71
RCC1-203ENST00000373833 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
RCC1-203ENST00000373833 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
RCC1-203ENST00000373833 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
RCC1-203ENST00000373833 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
RCC1-203ENST00000373833 NACADO15069 1562 aa18.85■□□□□ 0.61
RCC1-203ENST00000373833 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
RCC1-203ENST00000373833 UNC13AQ9UPW8 1703 aa18.61■□□□□ 0.57
RCC1-203ENST00000373833 MYO15BQ96JP2 1530 aa18.58■□□□□ 0.56
RCC1-203ENST00000373833 CECR2Q9BXF3 1484 aa18.51■□□□□ 0.55
RCC1-203ENST00000373833 BICRAQ9NZM4 1560 aa18.44■□□□□ 0.54
RCC1-203ENST00000373833 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
RCC1-203ENST00000373833 RSF1Q96T23 1441 aaPredicted RBP18.18■□□□□ 0.5
RCC1-203ENST00000373833 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
RCC1-203ENST00000373833 WIZO95785 1651 aa18.09■□□□□ 0.49
RCC1-203ENST00000373833 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
RCC1-203ENST00000373833 EIF4G1Q04637 1599 aaKnown RBP17.94■□□□□ 0.46
RCC1-203ENST00000373833 BAZ1AQ9NRL2 1556 aaPredicted RBP17.93■□□□□ 0.46
RCC1-203ENST00000373833 ATAD2BQ9ULI0 1458 aa17.81■□□□□ 0.44
RCC1-203ENST00000373833 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
RCC1-203ENST00000373833 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
RCC1-203ENST00000373833 BAZ1BQ9UIG0 1483 aaKnown RBP17.74■□□□□ 0.43
RCC1-203ENST00000373833 CCDC88BA6NC98 1476 aa17.67■□□□□ 0.42
RCC1-203ENST00000373833 FAM9AQ8IZU1 332 aaPredicted RBP17.63■□□□□ 0.41
RCC1-203ENST00000373833 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
RCC1-203ENST00000373833 TOP2AP11388 1531 aaKnown RBP17.58■□□□□ 0.4
RCC1-203ENST00000373833 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
RCC1-203ENST00000373833 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
RCC1-203ENST00000373833 NESP48681 1621 aa17.51■□□□□ 0.39
RCC1-203ENST00000373833 TRIM41Q8WV44 630 aa17.48■□□□□ 0.39
RCC1-203ENST00000373833 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
RCC1-203ENST00000373833 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
RCC1-203ENST00000373833 HMGXB3Q12766 1538 aa17.34■□□□□ 0.37
RCC1-203ENST00000373833 LOC105371045A0A1W2PR82 267 aa17.33■□□□□ 0.36
RCC1-203ENST00000373833 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
RCC1-203ENST00000373833 RANGAP1P46060 587 aaPredicted RBP17.2■□□□□ 0.34
RCC1-203ENST00000373833 CFTRP13569 1480 aa17.15■□□□□ 0.34
RCC1-203ENST00000373833 WRNQ14191 1432 aaPredicted RBP eCLIP17.12■□□□□ 0.33
RCC1-203ENST00000373833 FANCD2Q9BXW9 1451 aa17.11■□□□□ 0.33
RCC1-203ENST00000373833 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
RCC1-203ENST00000373833 SOGA1O94964 1423 aa17.09■□□□□ 0.33
RCC1-203ENST00000373833 SYNJ1O43426 1573 aa17.07■□□□□ 0.32
RCC1-203ENST00000373833 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
RCC1-203ENST00000373833 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
RCC1-203ENST00000373833 CUX1P39880 1505 aa16.99■□□□□ 0.31
RCC1-203ENST00000373833 RAD54L2Q9Y4B4 1467 aa16.99■□□□□ 0.31
RCC1-203ENST00000373833 CEP164Q9UPV0 1460 aa16.96■□□□□ 0.31
RCC1-203ENST00000373833 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
RCC1-203ENST00000373833 TDRD9Q8NDG6 1382 aaKnown RBP16.93■□□□□ 0.3
RCC1-203ENST00000373833 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
RCC1-203ENST00000373833 LAMC3Q9Y6N6 1575 aa16.9■□□□□ 0.3
RCC1-203ENST00000373833 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
RCC1-203ENST00000373833 FGD5Q6ZNL6 1462 aa16.88■□□□□ 0.29
RCC1-203ENST00000373833 PPARGC1BQ86YN6 1023 aaKnown RBP16.86■□□□□ 0.29
RCC1-203ENST00000373833 FBLN2P98095 1184 aa16.86■□□□□ 0.29
RCC1-203ENST00000373833 TTBK1Q5TCY1 1321 aaPredicted RBP16.86■□□□□ 0.29
RCC1-203ENST00000373833 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
RCC1-203ENST00000373833 HRCP23327 699 aa16.85■□□□□ 0.29
RCC1-203ENST00000373833 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
RCC1-203ENST00000373833 CUX2O14529 1486 aa16.81■□□□□ 0.28
RCC1-203ENST00000373833 POLA1P09884 1462 aaPredicted RBP16.81■□□□□ 0.28
RCC1-203ENST00000373833 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.284e-10■■■■■ 37.7
RCC1-203ENST00000373833 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
RCC1-203ENST00000373833 ZNF608Q9ULD9 1512 aaPredicted RBP16.76■□□□□ 0.27
RCC1-203ENST00000373833 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
RCC1-203ENST00000373833 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
RCC1-203ENST00000373833 P3H3Q8IVL6 736 aa16.72■□□□□ 0.27
RCC1-203ENST00000373833 DNMBPQ6XZF7 1577 aa16.7■□□□□ 0.26
RCC1-203ENST00000373833 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
RCC1-203ENST00000373833 RAPGEF2Q9Y4G8 1499 aa16.65■□□□□ 0.26
RCC1-203ENST00000373833 KIF27Q86VH2 1401 aa16.63■□□□□ 0.25
RCC1-203ENST00000373833 IGF1RP08069 1367 aa16.62■□□□□ 0.25
RCC1-203ENST00000373833 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
RCC1-203ENST00000373833 THOC2Q8NI27 1593 aaKnown RBP16.6■□□□□ 0.25
RCC1-203ENST00000373833 ARID3CA6NKF2 412 aa16.59■□□□□ 0.25
RCC1-203ENST00000373833 ATP1B4Q9UN42 357 aaPredicted RBP16.56■□□□□ 0.24
RCC1-203ENST00000373833 CARMIL1Q5VZK9 1371 aa16.56■□□□□ 0.24
RCC1-203ENST00000373833 GAPVD1Q14C86 1478 aa16.55■□□□□ 0.24
RCC1-203ENST00000373833 WDR62O43379 1518 aa16.54■□□□□ 0.24
RCC1-203ENST00000373833 PELP1Q8IZL8 1130 aaKnown RBP16.54■□□□□ 0.24
RCC1-203ENST00000373833 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
RCC1-203ENST00000373833 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
RCC1-203ENST00000373833 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
RCC1-203ENST00000373833 SNAPC4Q5SXM2 1469 aa16.44■□□□□ 0.22
RCC1-203ENST00000373833 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
RCC1-203ENST00000373833 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
RCC1-203ENST00000373833 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
RCC1-203ENST00000373833 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
RCC1-203ENST00000373833 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
RCC1-203ENST00000373833 EEA1Q15075 1411 aa16.37■□□□□ 0.21
RCC1-203ENST00000373833 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
RCC1-203ENST00000373833 WDR97A6NE52 1622 aa16.35■□□□□ 0.21
RCC1-203ENST00000373833 ABCA5Q8WWZ7 1642 aa16.35■□□□□ 0.21
RCC1-203ENST00000373833 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
RCC1-203ENST00000373833 CLIP1P30622 1438 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms