RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 NISCHQ9Y2I1 1504 aa44.17■■■■■ 4.66
CIRBP-227ENST00000590188 CCDC180Q9P1Z9 1646 aa39.32■■■■□ 3.89
CIRBP-227ENST00000590188 ABCC9O60706 1549 aa38.93■■■■□ 3.82
CIRBP-227ENST00000590188 DCAF8L2P0C7V8 631 aa37.21■■■■□ 3.55
CIRBP-227ENST00000590188 RB1CC1Q8TDY2 1594 aa37.2■■■■□ 3.55
CIRBP-227ENST00000590188 NACADO15069 1562 aa37.05■■■■□ 3.52
CIRBP-227ENST00000590188 ZCCHC6Q5VYS8 1495 aaKnown RBP36.74■■■■□ 3.47
CIRBP-227ENST00000590188 MYO15BQ96JP2 1530 aa36.65■■■■□ 3.46
CIRBP-227ENST00000590188 DCAF1Q9Y4B6 1507 aa36.43■■■■□ 3.42
CIRBP-227ENST00000590188 UNC13AQ9UPW8 1703 aa36.38■■■■□ 3.41
CIRBP-227ENST00000590188 PABPN1Q86U42 306 aaKnown RBP eCLIP36.37■■■■□ 3.411e-14■■□□□ 14.3
CIRBP-227ENST00000590188 BICRAQ9NZM4 1560 aa36.1■■■■□ 3.37
CIRBP-227ENST00000590188 SCRIBQ14160 1630 aa36.03■■■■□ 3.36
CIRBP-227ENST00000590188 DNAJC5BQ9UF47 199 aa35.98■■■■□ 3.35
CIRBP-227ENST00000590188 SHROOM4Q9ULL8 1493 aa35.56■■■■□ 3.28
CIRBP-227ENST00000590188 EIF4G1Q04637 1599 aaKnown RBP35.19■■■■□ 3.22
CIRBP-227ENST00000590188 CC2D2AQ9P2K1 1620 aa35.14■■■■□ 3.22
CIRBP-227ENST00000590188 CECR2Q9BXF3 1484 aa34.96■■■■□ 3.19
CIRBP-227ENST00000590188 SMARCA4P51532 1647 aa34.35■■■■□ 3.09
CIRBP-227ENST00000590188 BAZ1AQ9NRL2 1556 aaPredicted RBP34.24■■■■□ 3.07
CIRBP-227ENST00000590188 ATAD2BQ9ULI0 1458 aa34.23■■■■□ 3.07
CIRBP-227ENST00000590188 NCAPD3P42695 1498 aa34.2■■■■□ 3.06
CIRBP-227ENST00000590188 SMARCA2P51531 1590 aa34.14■■■■□ 3.06
CIRBP-227ENST00000590188 MROH2BQ7Z745 1585 aa34.09■■■■□ 3.05
CIRBP-227ENST00000590188 HMGXB3Q12766 1538 aa34■■■■□ 3.03
CIRBP-227ENST00000590188 BAZ1BQ9UIG0 1483 aaKnown RBP33.95■■■■□ 3.03
CIRBP-227ENST00000590188 PEG3Q9GZU2 1588 aa33.93■■■■□ 3.02
CIRBP-227ENST00000590188 WIZO95785 1651 aa33.73■■■□□ 2.99
CIRBP-227ENST00000590188 NESP48681 1621 aa33.61■■■□□ 2.97
CIRBP-227ENST00000590188 RSF1Q96T23 1441 aaPredicted RBP33.57■■■□□ 2.96
CIRBP-227ENST00000590188 ERCC6Q03468 1493 aa33.56■■■□□ 2.96
CIRBP-227ENST00000590188 LAMC3Q9Y6N6 1575 aa33.35■■■□□ 2.93
CIRBP-227ENST00000590188 TOP2AP11388 1531 aaKnown RBP33.3■■■□□ 2.92
CIRBP-227ENST00000590188 CADPSQ9ULU8 1353 aa33.23■■■□□ 2.91
CIRBP-227ENST00000590188 CUX2O14529 1486 aa33.19■■■□□ 2.9
CIRBP-227ENST00000590188 PDS5BQ9NTI5 1447 aa33.16■■■□□ 2.9
CIRBP-227ENST00000590188 KIF21AQ7Z4S6 1674 aa33.16■■■□□ 2.9
CIRBP-227ENST00000590188 THOC2Q8NI27 1593 aaKnown RBP33.08■■■□□ 2.89
CIRBP-227ENST00000590188 CFTRP13569 1480 aa32.95■■■□□ 2.87
CIRBP-227ENST00000590188 CCDC88BA6NC98 1476 aa32.93■■■□□ 2.86
CIRBP-227ENST00000590188 FANCD2Q9BXW9 1451 aa32.88■■■□□ 2.85
CIRBP-227ENST00000590188 MRC2Q9UBG0 1479 aa32.86■■■□□ 2.85
CIRBP-227ENST00000590188 CEP164Q9UPV0 1460 aa32.86■■■□□ 2.85
CIRBP-227ENST00000590188 WDR62O43379 1518 aa32.74■■■□□ 2.83
CIRBP-227ENST00000590188 PRDM2Q13029 1718 aa32.66■■■□□ 2.82
CIRBP-227ENST00000590188 SUPT5HO00267 1087 aaKnown RBP32.66■■■□□ 2.82
CIRBP-227ENST00000590188 URB2Q14146 1524 aaKnown RBP32.58■■■□□ 2.81
CIRBP-227ENST00000590188 DNAJC5Q9H3Z4 198 aa32.54■■■□□ 2.8
CIRBP-227ENST00000590188 TOPBP1Q92547 1522 aa32.32■■■□□ 2.76
CIRBP-227ENST00000590188 DNMBPQ6XZF7 1577 aa32.24■■■□□ 2.75
CIRBP-227ENST00000590188 ABCC8Q09428 1581 aa32.21■■■□□ 2.75
CIRBP-227ENST00000590188 IFT140Q96RY7 1462 aa32.16■■■□□ 2.74
CIRBP-227ENST00000590188 ZNF608Q9ULD9 1512 aaPredicted RBP32.11■■■□□ 2.73
CIRBP-227ENST00000590188 POLA1P09884 1462 aaPredicted RBP32.03■■■□□ 2.72
CIRBP-227ENST00000590188 CUX1P39880 1505 aa31.99■■■□□ 2.71
CIRBP-227ENST00000590188 TARBP1Q13395 1621 aaKnown RBP31.96■■■□□ 2.71
CIRBP-227ENST00000590188 RAD54L2Q9Y4B4 1467 aa31.96■■■□□ 2.71
CIRBP-227ENST00000590188 EIF4G3O43432 1585 aaKnown RBP31.94■■■□□ 2.7
CIRBP-227ENST00000590188 FGD5Q6ZNL6 1462 aa31.94■■■□□ 2.7
CIRBP-227ENST00000590188 SOGA1O94964 1423 aa31.91■■■□□ 2.7
CIRBP-227ENST00000590188 AQRO60306 1485 aaKnown RBP eCLIP31.91■■■□□ 2.72e-18■■■■□ 24
CIRBP-227ENST00000590188 OSCARQ8IYS5 282 aa31.82■■■□□ 2.68
CIRBP-227ENST00000590188 TDRD9Q8NDG6 1382 aaKnown RBP31.81■■■□□ 2.68
CIRBP-227ENST00000590188 WRNQ14191 1432 aaPredicted RBP eCLIP31.67■■■□□ 2.66
CIRBP-227ENST00000590188 FBLN2P98095 1184 aa31.64■■■□□ 2.66
CIRBP-227ENST00000590188 SYNJ1O43426 1573 aa31.64■■■□□ 2.65
CIRBP-227ENST00000590188 WDR97A6NE52 1622 aa31.64■■■□□ 2.65
CIRBP-227ENST00000590188 CHD1O14646 1710 aa31.61■■■□□ 2.65
CIRBP-227ENST00000590188 TOP2BQ02880 1626 aa31.6■■■□□ 2.65
CIRBP-227ENST00000590188 SNAPC4Q5SXM2 1469 aa31.59■■■□□ 2.65
CIRBP-227ENST00000590188 BIVM-ERCC5R4GMW8 1640 aa31.59■■■□□ 2.65
CIRBP-227ENST00000590188 ABCA10Q8WWZ4 1543 aa31.55■■■□□ 2.64
CIRBP-227ENST00000590188 GRIN2BQ13224 1484 aa31.53■■■□□ 2.64
CIRBP-227ENST00000590188 TRIM41Q8WV44 630 aa31.52■■■□□ 2.64
CIRBP-227ENST00000590188 GAPVD1Q14C86 1478 aa31.52■■■□□ 2.64
CIRBP-227ENST00000590188 PBRM1Q86U86 1689 aa31.48■■■□□ 2.63
CIRBP-227ENST00000590188 ABCA5Q8WWZ7 1642 aa31.46■■■□□ 2.63
CIRBP-227ENST00000590188 MAGI1Q96QZ7 1491 aaPredicted RBP31.45■■■□□ 2.62
CIRBP-227ENST00000590188 CHMP7Q8WUX9 453 aaPredicted RBP31.43■■■□□ 2.62
CIRBP-227ENST00000590188 RIMBP3CA6NJZ7 1639 aa31.37■■■□□ 2.61
CIRBP-227ENST00000590188 RIMBP3BA6NNM3 1639 aa31.37■■■□□ 2.61
CIRBP-227ENST00000590188 RIMBP3Q9UFD9 1639 aa31.37■■■□□ 2.61
CIRBP-227ENST00000590188 SYNJ2O15056 1496 aa31.36■■■□□ 2.61
CIRBP-227ENST00000590188 ARHGEF11O15085 1522 aa31.33■■■□□ 2.61
CIRBP-227ENST00000590188 CLASP1Q7Z460 1538 aa31.21■■■□□ 2.59
CIRBP-227ENST00000590188 ADAMTS12P58397 1594 aa31.21■■■□□ 2.59
CIRBP-227ENST00000590188 ERICH3Q5RHP9 1530 aa31.15■■■□□ 2.58
CIRBP-227ENST00000590188 GRIN2AQ12879 1464 aa31.14■■■□□ 2.57
CIRBP-227ENST00000590188 FHAD1B1AJZ9 1412 aa31.12■■■□□ 2.57
CIRBP-227ENST00000590188 CYB5RLQ6IPT4 315 aa31.11■■■□□ 2.57
CIRBP-227ENST00000590188 ARAP1Q96P48 1450 aa31.08■■■□□ 2.57
CIRBP-227ENST00000590188 CEP170Q5SW79 1584 aa31.03■■■□□ 2.56
CIRBP-227ENST00000590188 KIF27Q86VH2 1401 aa31.01■■■□□ 2.55
CIRBP-227ENST00000590188 NUP160Q12769 1436 aa30.98■■■□□ 2.55
CIRBP-227ENST00000590188 IGF1RP08069 1367 aa30.92■■■□□ 2.54
CIRBP-227ENST00000590188 ERCC6L2Q5T890 1561 aa30.85■■■□□ 2.53
CIRBP-227ENST00000590188 CUL7Q14999 1698 aa30.83■■■□□ 2.53
CIRBP-227ENST00000590188 SHROOM2Q13796 1616 aa30.76■■■□□ 2.52
CIRBP-227ENST00000590188 CARMIL1Q5VZK9 1371 aa30.76■■■□□ 2.51
CIRBP-227ENST00000590188 RUSC2Q8N2Y8 1516 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms