RNA–Protein interactions for RNA: ENST00000540009.1

ZNF664-208, Transcript of zinc finger protein 664, humanhuman

TSL 3

Gene ZNF664, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF664-208ENST00000540009 NISCHQ9Y2I1 1504 aa55.36■■■■■ 6.45
ZNF664-208ENST00000540009 CCDC180Q9P1Z9 1646 aa49.22■■■■■ 5.47
ZNF664-208ENST00000540009 ABCC9O60706 1549 aa48.37■■■■■ 5.33
ZNF664-208ENST00000540009 RB1CC1Q8TDY2 1594 aa46.42■■■■■ 5.02
ZNF664-208ENST00000540009 DCAF8L2P0C7V8 631 aa46.39■■■■■ 5.02
ZNF664-208ENST00000540009 NACADO15069 1562 aa46.33■■■■■ 5.01
ZNF664-208ENST00000540009 ZCCHC6Q5VYS8 1495 aaKnown RBP46.07■■■■■ 4.97
ZNF664-208ENST00000540009 MYO15BQ96JP2 1530 aa45.98■■■■■ 4.95
ZNF664-208ENST00000540009 DCAF1Q9Y4B6 1507 aa45.75■■■■■ 4.91
ZNF664-208ENST00000540009 UNC13AQ9UPW8 1703 aa45.38■■■■■ 4.86
ZNF664-208ENST00000540009 PABPN1Q86U42 306 aaKnown RBP eCLIP45.22■■■■■ 4.83
ZNF664-208ENST00000540009 BICRAQ9NZM4 1560 aa45.04■■■■■ 4.8
ZNF664-208ENST00000540009 SCRIBQ14160 1630 aa44.97■■■■■ 4.79
ZNF664-208ENST00000540009 DNAJC5BQ9UF47 199 aa44.55■■■■■ 4.72
ZNF664-208ENST00000540009 SHROOM4Q9ULL8 1493 aa44.48■■■■■ 4.71
ZNF664-208ENST00000540009 EIF4G1Q04637 1599 aaKnown RBP43.87■■■■■ 4.61
ZNF664-208ENST00000540009 CC2D2AQ9P2K1 1620 aa43.73■■■■■ 4.59
ZNF664-208ENST00000540009 CECR2Q9BXF3 1484 aa43.46■■■■■ 4.55
ZNF664-208ENST00000540009 SMARCA4P51532 1647 aa42.98■■■■■ 4.47
ZNF664-208ENST00000540009 BAZ1AQ9NRL2 1556 aaPredicted RBP42.9■■■■■ 4.46
ZNF664-208ENST00000540009 ATAD2BQ9ULI0 1458 aa42.79■■■■■ 4.44
ZNF664-208ENST00000540009 NCAPD3P42695 1498 aa42.76■■■■■ 4.44
ZNF664-208ENST00000540009 SMARCA2P51531 1590 aa42.69■■■■■ 4.43
ZNF664-208ENST00000540009 MROH2BQ7Z745 1585 aa42.68■■■■■ 4.42
ZNF664-208ENST00000540009 PEG3Q9GZU2 1588 aa42.53■■■■■ 4.4
ZNF664-208ENST00000540009 HMGXB3Q12766 1538 aa42.52■■■■■ 4.4
ZNF664-208ENST00000540009 BAZ1BQ9UIG0 1483 aaKnown RBP42.43■■■■■ 4.38
ZNF664-208ENST00000540009 WIZO95785 1651 aa42.22■■■■■ 4.35
ZNF664-208ENST00000540009 RSF1Q96T23 1441 aaPredicted RBP42.14■■■■■ 4.34
ZNF664-208ENST00000540009 NESP48681 1621 aa41.83■■■■■ 4.29
ZNF664-208ENST00000540009 TOP2AP11388 1531 aaKnown RBP41.73■■■■■ 4.27
ZNF664-208ENST00000540009 ERCC6Q03468 1493 aa41.69■■■■■ 4.26
ZNF664-208ENST00000540009 LAMC3Q9Y6N6 1575 aa41.65■■■■■ 4.26
ZNF664-208ENST00000540009 CADPSQ9ULU8 1353 aa41.53■■■■■ 4.24
ZNF664-208ENST00000540009 PDS5BQ9NTI5 1447 aa41.39■■■■■ 4.22
ZNF664-208ENST00000540009 KIF21AQ7Z4S6 1674 aa41.3■■■■■ 4.2
ZNF664-208ENST00000540009 CCDC88BA6NC98 1476 aa41.28■■■■■ 4.2
ZNF664-208ENST00000540009 CUX2O14529 1486 aa41.26■■■■■ 4.2
ZNF664-208ENST00000540009 CFTRP13569 1480 aa41.24■■■■■ 4.19
ZNF664-208ENST00000540009 THOC2Q8NI27 1593 aaKnown RBP41.18■■■■■ 4.18
ZNF664-208ENST00000540009 FANCD2Q9BXW9 1451 aa41.06■■■■■ 4.16
ZNF664-208ENST00000540009 SUPT5HO00267 1087 aaKnown RBP41.03■■■■■ 4.16
ZNF664-208ENST00000540009 CEP164Q9UPV0 1460 aa41.01■■■■■ 4.16
ZNF664-208ENST00000540009 MRC2Q9UBG0 1479 aa40.97■■■■■ 4.15
ZNF664-208ENST00000540009 PRDM2Q13029 1718 aa40.89■■■■■ 4.14
ZNF664-208ENST00000540009 WDR62O43379 1518 aa40.84■■■■■ 4.13
ZNF664-208ENST00000540009 URB2Q14146 1524 aaKnown RBP40.66■■■■■ 4.1
ZNF664-208ENST00000540009 TOPBP1Q92547 1522 aa40.39■■■■■ 4.06
ZNF664-208ENST00000540009 ABCC8Q09428 1581 aa40.34■■■■■ 4.05
ZNF664-208ENST00000540009 DNMBPQ6XZF7 1577 aa40.31■■■■■ 4.04
ZNF664-208ENST00000540009 DNAJC5Q9H3Z4 198 aa40.18■■■■■ 4.02
ZNF664-208ENST00000540009 IFT140Q96RY7 1462 aa40.15■■■■■ 4.02
ZNF664-208ENST00000540009 CUX1P39880 1505 aa40.04■■■■■ 4
ZNF664-208ENST00000540009 POLA1P09884 1462 aaPredicted RBP40.03■■■■■ 4
ZNF664-208ENST00000540009 ZNF608Q9ULD9 1512 aaPredicted RBP40.01■■■■■ 4
ZNF664-208ENST00000540009 TARBP1Q13395 1621 aaKnown RBP39.94■■■■□ 3.99
ZNF664-208ENST00000540009 FGD5Q6ZNL6 1462 aa39.93■■■■□ 3.98
ZNF664-208ENST00000540009 RAD54L2Q9Y4B4 1467 aa39.9■■■■□ 3.98
ZNF664-208ENST00000540009 SOGA1O94964 1423 aa39.88■■■■□ 3.97
ZNF664-208ENST00000540009 EIF4G3O43432 1585 aaKnown RBP39.83■■■■□ 3.97
ZNF664-208ENST00000540009 AQRO60306 1485 aaKnown RBP eCLIP39.78■■■■□ 3.968e-7■■■■■ 30.7
ZNF664-208ENST00000540009 WRNQ14191 1432 aaPredicted RBP eCLIP39.74■■■■□ 3.95
ZNF664-208ENST00000540009 TDRD9Q8NDG6 1382 aaKnown RBP39.69■■■■□ 3.94
ZNF664-208ENST00000540009 SYNJ1O43426 1573 aa39.65■■■■□ 3.94
ZNF664-208ENST00000540009 TOP2BQ02880 1626 aa39.64■■■■□ 3.94
ZNF664-208ENST00000540009 BIVM-ERCC5R4GMW8 1640 aa39.63■■■■□ 3.93
ZNF664-208ENST00000540009 WDR97A6NE52 1622 aa39.58■■■■□ 3.93
ZNF664-208ENST00000540009 OSCARQ8IYS5 282 aa39.56■■■■□ 3.92
ZNF664-208ENST00000540009 ABCA10Q8WWZ4 1543 aa39.51■■■■□ 3.92
ZNF664-208ENST00000540009 GRIN2BQ13224 1484 aa39.41■■■■□ 3.9
ZNF664-208ENST00000540009 GAPVD1Q14C86 1478 aa39.41■■■■□ 3.9
ZNF664-208ENST00000540009 SNAPC4Q5SXM2 1469 aa39.39■■■■□ 3.9
ZNF664-208ENST00000540009 ABCA5Q8WWZ7 1642 aa39.36■■■■□ 3.89
ZNF664-208ENST00000540009 CHD1O14646 1710 aa39.35■■■■□ 3.89
ZNF664-208ENST00000540009 FBLN2P98095 1184 aa39.35■■■■□ 3.89
ZNF664-208ENST00000540009 PBRM1Q86U86 1689 aa39.32■■■■□ 3.89
ZNF664-208ENST00000540009 MAGI1Q96QZ7 1491 aaPredicted RBP39.3■■■■□ 3.88
ZNF664-208ENST00000540009 CHMP7Q8WUX9 453 aaPredicted RBP39.2■■■■□ 3.87
ZNF664-208ENST00000540009 SYNJ2O15056 1496 aa39.17■■■■□ 3.86
ZNF664-208ENST00000540009 ERICH3Q5RHP9 1530 aa39.03■■■■□ 3.84
ZNF664-208ENST00000540009 ADAMTS12P58397 1594 aa39.01■■■■□ 3.84
ZNF664-208ENST00000540009 FHAD1B1AJZ9 1412 aa38.94■■■■□ 3.82
ZNF664-208ENST00000540009 RIMBP3CA6NJZ7 1639 aa38.93■■■■□ 3.82
ZNF664-208ENST00000540009 RIMBP3BA6NNM3 1639 aa38.93■■■■□ 3.82
ZNF664-208ENST00000540009 RIMBP3Q9UFD9 1639 aa38.93■■■■□ 3.82
ZNF664-208ENST00000540009 ARHGEF11O15085 1522 aa38.92■■■■□ 3.82
ZNF664-208ENST00000540009 CLASP1Q7Z460 1538 aa38.92■■■■□ 3.82
ZNF664-208ENST00000540009 KIF27Q86VH2 1401 aa38.91■■■■□ 3.82
ZNF664-208ENST00000540009 GRIN2AQ12879 1464 aa38.91■■■■□ 3.82
ZNF664-208ENST00000540009 TRIM41Q8WV44 630 aa38.87■■■■□ 3.81
ZNF664-208ENST00000540009 IGF1RP08069 1367 aa38.79■■■■□ 3.8
ZNF664-208ENST00000540009 CEP170Q5SW79 1584 aa38.74■■■■□ 3.79
ZNF664-208ENST00000540009 NUP160Q12769 1436 aa38.73■■■■□ 3.79
ZNF664-208ENST00000540009 CUL7Q14999 1698 aa38.65■■■■□ 3.78
ZNF664-208ENST00000540009 CYB5RLQ6IPT4 315 aa38.61■■■■□ 3.77
ZNF664-208ENST00000540009 ARAP1Q96P48 1450 aa38.6■■■■□ 3.77
ZNF664-208ENST00000540009 RUSC2Q8N2Y8 1516 aa38.57■■■■□ 3.76
ZNF664-208ENST00000540009 CARMIL1Q5VZK9 1371 aa38.55■■■■□ 3.76
ZNF664-208ENST00000540009 SHROOM2Q13796 1616 aa38.44■■■■□ 3.74
ZNF664-208ENST00000540009 ERCC6L2Q5T890 1561 aa38.41■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 269 ms