RNA–Protein interactions for RNA: ENST00000440176.5

ACAA1-207, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 2

Gene ACAA1, Length 1,328 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-207ENST00000440176 NISCHQ9Y2I1 1504 aa50.7■■■■■ 5.71
ACAA1-207ENST00000440176 CCDC180Q9P1Z9 1646 aa44.95■■■■■ 4.79
ACAA1-207ENST00000440176 ABCC9O60706 1549 aa43.82■■■■■ 4.61
ACAA1-207ENST00000440176 NACADO15069 1562 aa42.31■■■■■ 4.36
ACAA1-207ENST00000440176 RB1CC1Q8TDY2 1594 aa42.28■■■■■ 4.36
ACAA1-207ENST00000440176 DCAF8L2P0C7V8 631 aa42.24■■■■■ 4.35
ACAA1-207ENST00000440176 ZCCHC6Q5VYS8 1495 aaKnown RBP42.24■■■■■ 4.35
ACAA1-207ENST00000440176 MYO15BQ96JP2 1530 aa42.2■■■■■ 4.35
ACAA1-207ENST00000440176 DCAF1Q9Y4B6 1507 aa42.04■■■■■ 4.32
ACAA1-207ENST00000440176 UNC13AQ9UPW8 1703 aa41.17■■■■■ 4.18
ACAA1-207ENST00000440176 PABPN1Q86U42 306 aaKnown RBP eCLIP41.02■■■■■ 4.16
ACAA1-207ENST00000440176 BICRAQ9NZM4 1560 aa40.97■■■■■ 4.15
ACAA1-207ENST00000440176 SCRIBQ14160 1630 aa40.93■■■■■ 4.14
ACAA1-207ENST00000440176 SHROOM4Q9ULL8 1493 aa40.68■■■■■ 4.1
ACAA1-207ENST00000440176 DNAJC5BQ9UF47 199 aa40.19■■■■■ 4.02
ACAA1-207ENST00000440176 EIF4G1Q04637 1599 aaKnown RBP39.88■■■■□ 3.98
ACAA1-207ENST00000440176 CC2D2AQ9P2K1 1620 aa39.66■■■■□ 3.94
ACAA1-207ENST00000440176 CECR2Q9BXF3 1484 aa39.44■■■■□ 3.9
ACAA1-207ENST00000440176 BAZ1AQ9NRL2 1556 aaPredicted RBP39.27■■■■□ 3.88
ACAA1-207ENST00000440176 SMARCA4P51532 1647 aa39.24■■■■□ 3.87
ACAA1-207ENST00000440176 NCAPD3P42695 1498 aa39.09■■■■□ 3.85
ACAA1-207ENST00000440176 ATAD2BQ9ULI0 1458 aa39.07■■■■□ 3.84
ACAA1-207ENST00000440176 MROH2BQ7Z745 1585 aa39.03■■■■□ 3.84
ACAA1-207ENST00000440176 SMARCA2P51531 1590 aa39.02■■■■□ 3.84
ACAA1-207ENST00000440176 PEG3Q9GZU2 1588 aa38.95■■■■□ 3.83
ACAA1-207ENST00000440176 HMGXB3Q12766 1538 aa38.83■■■■□ 3.81
ACAA1-207ENST00000440176 BAZ1BQ9UIG0 1483 aaKnown RBP38.7■■■■□ 3.79
ACAA1-207ENST00000440176 RSF1Q96T23 1441 aaPredicted RBP38.69■■■■□ 3.78
ACAA1-207ENST00000440176 WIZO95785 1651 aa38.54■■■■□ 3.76
ACAA1-207ENST00000440176 TOP2AP11388 1531 aaKnown RBP38.21■■■■□ 3.71
ACAA1-207ENST00000440176 LAMC3Q9Y6N6 1575 aa37.96■■■■□ 3.67
ACAA1-207ENST00000440176 NESP48681 1621 aa37.95■■■■□ 3.67
ACAA1-207ENST00000440176 CADPSQ9ULU8 1353 aa37.95■■■■□ 3.67
ACAA1-207ENST00000440176 CCDC88BA6NC98 1476 aa37.8■■■■□ 3.64
ACAA1-207ENST00000440176 ERCC6Q03468 1493 aa37.78■■■■□ 3.64
ACAA1-207ENST00000440176 PDS5BQ9NTI5 1447 aa37.75■■■■□ 3.63
ACAA1-207ENST00000440176 CFTRP13569 1480 aa37.74■■■■□ 3.63
ACAA1-207ENST00000440176 SUPT5HO00267 1087 aaKnown RBP37.72■■■■□ 3.63
ACAA1-207ENST00000440176 FANCD2Q9BXW9 1451 aa37.44■■■■□ 3.58
ACAA1-207ENST00000440176 KIF21AQ7Z4S6 1674 aa37.44■■■■□ 3.58
ACAA1-207ENST00000440176 CUX2O14529 1486 aa37.42■■■■□ 3.58
ACAA1-207ENST00000440176 CEP164Q9UPV0 1460 aa37.36■■■■□ 3.57
ACAA1-207ENST00000440176 THOC2Q8NI27 1593 aaKnown RBP37.34■■■■□ 3.57
ACAA1-207ENST00000440176 MRC2Q9UBG0 1479 aa37.29■■■■□ 3.56
ACAA1-207ENST00000440176 PRDM2Q13029 1718 aa37.27■■■■□ 3.56
ACAA1-207ENST00000440176 WDR62O43379 1518 aa37.16■■■■□ 3.54
ACAA1-207ENST00000440176 URB2Q14146 1524 aaKnown RBP37.03■■■■□ 3.52
ACAA1-207ENST00000440176 ABCC8Q09428 1581 aa36.95■■■■□ 3.51
ACAA1-207ENST00000440176 TOPBP1Q92547 1522 aa36.84■■■■□ 3.49
ACAA1-207ENST00000440176 DNMBPQ6XZF7 1577 aa36.8■■■■□ 3.48
ACAA1-207ENST00000440176 IFT140Q96RY7 1462 aa36.62■■■■□ 3.45
ACAA1-207ENST00000440176 CUX1P39880 1505 aa36.6■■■■□ 3.45
ACAA1-207ENST00000440176 POLA1P09884 1462 aaPredicted RBP36.54■■■■□ 3.44
ACAA1-207ENST00000440176 WRNQ14191 1432 aaPredicted RBP eCLIP36.45■■■■□ 3.43
ACAA1-207ENST00000440176 FGD5Q6ZNL6 1462 aa36.44■■■■□ 3.42
ACAA1-207ENST00000440176 SOGA1O94964 1423 aa36.44■■■■□ 3.42
ACAA1-207ENST00000440176 TARBP1Q13395 1621 aaKnown RBP36.42■■■■□ 3.42
ACAA1-207ENST00000440176 ZNF608Q9ULD9 1512 aaPredicted RBP36.37■■■■□ 3.41
ACAA1-207ENST00000440176 RAD54L2Q9Y4B4 1467 aa36.35■■■■□ 3.41
ACAA1-207ENST00000440176 TOP2BQ02880 1626 aa36.33■■■■□ 3.41
ACAA1-207ENST00000440176 BIVM-ERCC5R4GMW8 1640 aa36.29■■■■□ 3.4
ACAA1-207ENST00000440176 SYNJ1O43426 1573 aa36.27■■■■□ 3.4
ACAA1-207ENST00000440176 AQRO60306 1485 aaKnown RBP eCLIP36.22■■■■□ 3.397e-7■■■■■ 29.3
ACAA1-207ENST00000440176 WDR97A6NE52 1622 aa36.2■■■■□ 3.39
ACAA1-207ENST00000440176 EIF4G3O43432 1585 aaKnown RBP36.18■■■■□ 3.38
ACAA1-207ENST00000440176 TDRD9Q8NDG6 1382 aaKnown RBP36.18■■■■□ 3.38
ACAA1-207ENST00000440176 DNAJC5Q9H3Z4 198 aa36.17■■■■□ 3.38
ACAA1-207ENST00000440176 ABCA10Q8WWZ4 1543 aa36.16■■■■□ 3.38
ACAA1-207ENST00000440176 GAPVD1Q14C86 1478 aa36■■■■□ 3.35
ACAA1-207ENST00000440176 GRIN2BQ13224 1484 aa35.98■■■■□ 3.35
ACAA1-207ENST00000440176 OSCARQ8IYS5 282 aa35.95■■■■□ 3.35
ACAA1-207ENST00000440176 ABCA5Q8WWZ7 1642 aa35.93■■■■□ 3.34
ACAA1-207ENST00000440176 MAGI1Q96QZ7 1491 aaPredicted RBP35.88■■■■□ 3.33
ACAA1-207ENST00000440176 SNAPC4Q5SXM2 1469 aa35.85■■■■□ 3.33
ACAA1-207ENST00000440176 PBRM1Q86U86 1689 aa35.77■■■■□ 3.32
ACAA1-207ENST00000440176 FBLN2P98095 1184 aa35.74■■■■□ 3.31
ACAA1-207ENST00000440176 SYNJ2O15056 1496 aa35.73■■■■□ 3.31
ACAA1-207ENST00000440176 CHMP7Q8WUX9 453 aaPredicted RBP35.73■■■■□ 3.31
ACAA1-207ENST00000440176 ERICH3Q5RHP9 1530 aa35.73■■■■□ 3.31
ACAA1-207ENST00000440176 KIF27Q86VH2 1401 aa35.7■■■■□ 3.31
ACAA1-207ENST00000440176 TRIM41Q8WV44 630 aa35.7■■■■□ 3.31
ACAA1-207ENST00000440176 CHD1O14646 1710 aa35.65■■■■□ 3.3
ACAA1-207ENST00000440176 FHAD1B1AJZ9 1412 aa35.62■■■■□ 3.29
ACAA1-207ENST00000440176 IGF1RP08069 1367 aa35.59■■■■□ 3.29
ACAA1-207ENST00000440176 ADAMTS12P58397 1594 aa35.56■■■■□ 3.28
ACAA1-207ENST00000440176 GRIN2AQ12879 1464 aa35.49■■■■□ 3.27
ACAA1-207ENST00000440176 CLASP1Q7Z460 1538 aa35.39■■■■□ 3.26
ACAA1-207ENST00000440176 NUP160Q12769 1436 aa35.38■■■■□ 3.25
ACAA1-207ENST00000440176 CUL7Q14999 1698 aa35.36■■■■□ 3.25
ACAA1-207ENST00000440176 CHIC1Q5VXU3 224 aa35.36■■■■□ 3.25
ACAA1-207ENST00000440176 CARMIL1Q5VZK9 1371 aa35.34■■■■□ 3.25
ACAA1-207ENST00000440176 RUSC2Q8N2Y8 1516 aa35.34■■■■□ 3.25
ACAA1-207ENST00000440176 CEP170Q5SW79 1584 aa35.26■■■■□ 3.23
ACAA1-207ENST00000440176 ARHGEF11O15085 1522 aa35.25■■■■□ 3.23
ACAA1-207ENST00000440176 RIMBP3CA6NJZ7 1639 aa35.18■■■■□ 3.22
ACAA1-207ENST00000440176 RIMBP3BA6NNM3 1639 aa35.18■■■■□ 3.22
ACAA1-207ENST00000440176 RIMBP3Q9UFD9 1639 aa35.18■■■■□ 3.22
ACAA1-207ENST00000440176 EEA1Q15075 1411 aa35.14■■■■□ 3.22
ACAA1-207ENST00000440176 RAPGEF2Q9Y4G8 1499 aa35.13■■■■□ 3.22
ACAA1-207ENST00000440176 CSRNP3Q8WYN3 585 aa35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms