RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 NISCHQ9Y2I1 1504 aa40.19■■■■■ 4.02
CROCCP2-206ENST00000639594 CCDC180Q9P1Z9 1646 aa34.97■■■■□ 3.19
CROCCP2-206ENST00000639594 ZCCHC6Q5VYS8 1495 aaKnown RBP33.92■■■■□ 3.02
CROCCP2-206ENST00000639594 SHROOM4Q9ULL8 1493 aa33.86■■■■□ 3.01
CROCCP2-206ENST00000639594 DCAF8L2P0C7V8 631 aa33.3■■■□□ 2.92
CROCCP2-206ENST00000639594 ABCC9O60706 1549 aa33.2■■■□□ 2.9
CROCCP2-206ENST00000639594 DCAF1Q9Y4B6 1507 aa33.13■■■□□ 2.89
CROCCP2-206ENST00000639594 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.88
CROCCP2-206ENST00000639594 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
CROCCP2-206ENST00000639594 NACADO15069 1562 aa32.54■■■□□ 2.8
CROCCP2-206ENST00000639594 SCRIBQ14160 1630 aa32.31■■■□□ 2.76
CROCCP2-206ENST00000639594 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
CROCCP2-206ENST00000639594 CHIC1Q5VXU3 224 aa32.09■■■□□ 2.73
CROCCP2-206ENST00000639594 UNC13AQ9UPW8 1703 aa31.82■■■□□ 2.68
CROCCP2-206ENST00000639594 RSF1Q96T23 1441 aaPredicted RBP31.62■■■□□ 2.65
CROCCP2-206ENST00000639594 BICRAQ9NZM4 1560 aa31.43■■■□□ 2.62
CROCCP2-206ENST00000639594 PABPN1Q86U42 306 aaKnown RBP eCLIP31.34■■■□□ 2.614e-13■□□□□ 10.5
CROCCP2-206ENST00000639594 CECR2Q9BXF3 1484 aa31.34■■■□□ 2.61
CROCCP2-206ENST00000639594 MROH2BQ7Z745 1585 aa31.18■■■□□ 2.58
CROCCP2-206ENST00000639594 LOC105371045A0A1W2PR82 267 aa31.09■■■□□ 2.57
CROCCP2-206ENST00000639594 WIZO95785 1651 aa31.05■■■□□ 2.56
CROCCP2-206ENST00000639594 BAZ1AQ9NRL2 1556 aaPredicted RBP30.99■■■□□ 2.55
CROCCP2-206ENST00000639594 SMARCA4P51532 1647 aa30.91■■■□□ 2.54
CROCCP2-206ENST00000639594 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
CROCCP2-206ENST00000639594 PCGF6Q9BYE7 350 aa30.75■■■□□ 2.51
CROCCP2-206ENST00000639594 HRCP23327 699 aa30.61■■■□□ 2.49
CROCCP2-206ENST00000639594 TOP2AP11388 1531 aaKnown RBP30.55■■■□□ 2.48
CROCCP2-206ENST00000639594 EIF4G1Q04637 1599 aaKnown RBP30.55■■■□□ 2.48
CROCCP2-206ENST00000639594 FAM9AQ8IZU1 332 aaPredicted RBP30.54■■■□□ 2.48
CROCCP2-206ENST00000639594 PEG3Q9GZU2 1588 aa30.47■■■□□ 2.47
CROCCP2-206ENST00000639594 ATAD2BQ9ULI0 1458 aa30.38■■■□□ 2.45
CROCCP2-206ENST00000639594 SMARCA2P51531 1590 aa30.38■■■□□ 2.45
CROCCP2-206ENST00000639594 CCDC88BA6NC98 1476 aa30.37■■■□□ 2.45
CROCCP2-206ENST00000639594 TRIM26Q12899 539 aaPredicted RBP30.3■■■□□ 2.44
CROCCP2-206ENST00000639594 EHMT2Q96KQ7 1210 aa30.24■■■□□ 2.43
CROCCP2-206ENST00000639594 BAZ1BQ9UIG0 1483 aaKnown RBP30.2■■■□□ 2.43
CROCCP2-206ENST00000639594 ABCC8Q09428 1581 aa30.2■■■□□ 2.43
CROCCP2-206ENST00000639594 NCAPD3P42695 1498 aa30.06■■■□□ 2.4
CROCCP2-206ENST00000639594 HMGXB3Q12766 1538 aa30.02■■■□□ 2.4
CROCCP2-206ENST00000639594 CC2D2AQ9P2K1 1620 aa30.01■■■□□ 2.39
CROCCP2-206ENST00000639594 PPARGC1BQ86YN6 1023 aaKnown RBP29.97■■■□□ 2.39
CROCCP2-206ENST00000639594 SOGA1O94964 1423 aa29.82■■■□□ 2.36
CROCCP2-206ENST00000639594 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.35
CROCCP2-206ENST00000639594 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
CROCCP2-206ENST00000639594 EEA1Q15075 1411 aa29.68■■■□□ 2.34
CROCCP2-206ENST00000639594 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
CROCCP2-206ENST00000639594 CSRNP3Q8WYN3 585 aa29.62■■■□□ 2.33
CROCCP2-206ENST00000639594 CEP162Q5TB80 1403 aa29.56■■■□□ 2.32
CROCCP2-206ENST00000639594 TNIKQ9UKE5 1360 aa29.56■■■□□ 2.32
CROCCP2-206ENST00000639594 ZEB1P37275 1124 aaPredicted RBP29.52■■■□□ 2.32
CROCCP2-206ENST00000639594 GOLGA3Q08378 1498 aa29.45■■■□□ 2.31
CROCCP2-206ENST00000639594 CFTRP13569 1480 aa29.43■■■□□ 2.3
CROCCP2-206ENST00000639594 UBTFP17480 764 aaKnown RBP29.43■■■□□ 2.3
CROCCP2-206ENST00000639594 DNAJC5BQ9UF47 199 aa29.42■■■□□ 2.3
CROCCP2-206ENST00000639594 KIF21BO75037 1637 aa29.35■■■□□ 2.29
CROCCP2-206ENST00000639594 TOP2BQ02880 1626 aa29.32■■■□□ 2.28
CROCCP2-206ENST00000639594 CADPSQ9ULU8 1353 aa29.31■■■□□ 2.28
CROCCP2-206ENST00000639594 CEP164Q9UPV0 1460 aa29.31■■■□□ 2.28
CROCCP2-206ENST00000639594 PRDM2Q13029 1718 aa29.31■■■□□ 2.28
CROCCP2-206ENST00000639594 BIVM-ERCC5R4GMW8 1640 aa29.27■■■□□ 2.28
CROCCP2-206ENST00000639594 TTBK1Q5TCY1 1321 aaPredicted RBP29.2■■■□□ 2.26
CROCCP2-206ENST00000639594 NESP48681 1621 aa29.19■■■□□ 2.26
CROCCP2-206ENST00000639594 RAPGEF2Q9Y4G8 1499 aa29.12■■■□□ 2.25
CROCCP2-206ENST00000639594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.1■■■□□ 2.25
CROCCP2-206ENST00000639594 CUX1P39880 1505 aa29.09■■■□□ 2.25
CROCCP2-206ENST00000639594 CLIP1P30622 1438 aa29.07■■■□□ 2.24
CROCCP2-206ENST00000639594 LAMC3Q9Y6N6 1575 aa29.03■■■□□ 2.24
CROCCP2-206ENST00000639594 FANCD2Q9BXW9 1451 aa29.03■■■□□ 2.24
CROCCP2-206ENST00000639594 CCER1Q8TC90 406 aaPredicted RBP29■■■□□ 2.23
CROCCP2-206ENST00000639594 VPS8Q8N3P4 1428 aa28.93■■■□□ 2.22
CROCCP2-206ENST00000639594 ERICH3Q5RHP9 1530 aa28.91■■■□□ 2.22
CROCCP2-206ENST00000639594 PRXQ9BXM0 1461 aa28.9■■■□□ 2.22
CROCCP2-206ENST00000639594 RANGAP1P46060 587 aaPredicted RBP28.85■■■□□ 2.21
CROCCP2-206ENST00000639594 KIF21AQ7Z4S6 1674 aa28.82■■■□□ 2.2
CROCCP2-206ENST00000639594 KIF27Q86VH2 1401 aa28.81■■■□□ 2.2
CROCCP2-206ENST00000639594 PDS5BQ9NTI5 1447 aa28.78■■■□□ 2.2
CROCCP2-206ENST00000639594 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
CROCCP2-206ENST00000639594 DNMBPQ6XZF7 1577 aa28.74■■■□□ 2.19
CROCCP2-206ENST00000639594 TOPBP1Q92547 1522 aa28.73■■■□□ 2.19
CROCCP2-206ENST00000639594 APLP2Q06481 763 aa28.71■■■□□ 2.19
CROCCP2-206ENST00000639594 URB2Q14146 1524 aaKnown RBP28.71■■■□□ 2.19
CROCCP2-206ENST00000639594 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
CROCCP2-206ENST00000639594 POLA1P09884 1462 aaPredicted RBP28.6■■■□□ 2.17
CROCCP2-206ENST00000639594 HNRNPUL2Q1KMD3 747 aaKnown RBP28.6■■■□□ 2.17
CROCCP2-206ENST00000639594 CUX2O14529 1486 aa28.59■■■□□ 2.17
CROCCP2-206ENST00000639594 RAD54L2Q9Y4B4 1467 aa28.56■■■□□ 2.16
CROCCP2-206ENST00000639594 IGF1RP08069 1367 aa28.52■■■□□ 2.16
CROCCP2-206ENST00000639594 ARHGAP35Q9NRY4 1499 aa28.47■■■□□ 2.15
CROCCP2-206ENST00000639594 MRC2Q9UBG0 1479 aa28.45■■■□□ 2.15
CROCCP2-206ENST00000639594 ABCA10Q8WWZ4 1543 aa28.44■■■□□ 2.14
CROCCP2-206ENST00000639594 KANK4Q5T7N3 995 aaPredicted RBP28.41■■■□□ 2.14
CROCCP2-206ENST00000639594 WDR97A6NE52 1622 aa28.41■■■□□ 2.14
CROCCP2-206ENST00000639594 CARMIL1Q5VZK9 1371 aa28.39■■■□□ 2.14
CROCCP2-206ENST00000639594 ERCC6Q03468 1493 aa28.38■■■□□ 2.13
CROCCP2-206ENST00000639594 WDR62O43379 1518 aa28.32■■■□□ 2.12
CROCCP2-206ENST00000639594 TARBP1Q13395 1621 aaKnown RBP28.31■■■□□ 2.12
CROCCP2-206ENST00000639594 DIEXFQ68CQ4 756 aaKnown RBP28.28■■■□□ 2.12
CROCCP2-206ENST00000639594 THOC2Q8NI27 1593 aaKnown RBP28.28■■■□□ 2.12
CROCCP2-206ENST00000639594 TDRD9Q8NDG6 1382 aaKnown RBP28.27■■■□□ 2.12
CROCCP2-206ENST00000639594 ABCA5Q8WWZ7 1642 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms