RNA–Protein interactions for RNA: ENST00000602795.5

NELFCD-213, Transcript of negative elongation factor complex member C/D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NELFCD, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-213ENST00000602795 NISCHQ9Y2I1 1504 aa45.28■■■■■ 4.84
NELFCD-213ENST00000602795 SHROOM4Q9ULL8 1493 aa38.78■■■■□ 3.8
NELFCD-213ENST00000602795 CCDC180Q9P1Z9 1646 aa38.44■■■■□ 3.74
NELFCD-213ENST00000602795 ZCCHC6Q5VYS8 1495 aaKnown RBP38.29■■■■□ 3.72
NELFCD-213ENST00000602795 SUPT5HO00267 1087 aaKnown RBP37.93■■■■□ 3.66
NELFCD-213ENST00000602795 DCAF8L2P0C7V8 631 aa37.69■■■■□ 3.62
NELFCD-213ENST00000602795 DCAF1Q9Y4B6 1507 aa37.01■■■■□ 3.52
NELFCD-213ENST00000602795 MYO15BQ96JP2 1530 aa36.79■■■■□ 3.48
NELFCD-213ENST00000602795 CHIC1Q5VXU3 224 aa36.79■■■■□ 3.48
NELFCD-213ENST00000602795 SCRIBQ14160 1630 aa36.22■■■■□ 3.39
NELFCD-213ENST00000602795 ABCC9O60706 1549 aa36.14■■■■□ 3.38
NELFCD-213ENST00000602795 RSF1Q96T23 1441 aaPredicted RBP35.85■■■■□ 3.33
NELFCD-213ENST00000602795 LOC105371045A0A1W2PR82 267 aa35.82■■■■□ 3.32
NELFCD-213ENST00000602795 PCGF6Q9BYE7 350 aa35.63■■■■□ 3.29
NELFCD-213ENST00000602795 RB1CC1Q8TDY2 1594 aa35.57■■■■□ 3.28
NELFCD-213ENST00000602795 NACADO15069 1562 aa35.56■■■■□ 3.28
NELFCD-213ENST00000602795 HRCP23327 699 aa35.5■■■■□ 3.27
NELFCD-213ENST00000602795 CECR2Q9BXF3 1484 aa35.46■■■■□ 3.27
NELFCD-213ENST00000602795 MROH2BQ7Z745 1585 aa35.3■■■■□ 3.24
NELFCD-213ENST00000602795 TRIM41Q8WV44 630 aa35.21■■■■□ 3.23
NELFCD-213ENST00000602795 WIZO95785 1651 aa35.14■■■■□ 3.22
NELFCD-213ENST00000602795 FAM9AQ8IZU1 332 aaPredicted RBP35.09■■■■□ 3.21
NELFCD-213ENST00000602795 PPARGC1BQ86YN6 1023 aaKnown RBP35.01■■■■□ 3.19
NELFCD-213ENST00000602795 EHMT2Q96KQ7 1210 aa34.92■■■■□ 3.18
NELFCD-213ENST00000602795 TRIM26Q12899 539 aaPredicted RBP34.82■■■■□ 3.16
NELFCD-213ENST00000602795 BAZ1AQ9NRL2 1556 aaPredicted RBP34.79■■■■□ 3.16
NELFCD-213ENST00000602795 UNC13AQ9UPW8 1703 aa34.7■■■■□ 3.15
NELFCD-213ENST00000602795 EIF4G1Q04637 1599 aaKnown RBP34.6■■■■□ 3.13
NELFCD-213ENST00000602795 SMARCA4P51532 1647 aa34.53■■■■□ 3.12
NELFCD-213ENST00000602795 TOP2AP11388 1531 aaKnown RBP34.45■■■■□ 3.1
NELFCD-213ENST00000602795 PABPN1Q86U42 306 aaKnown RBP eCLIP34.43■■■■□ 3.18e-7■■□□□ 12.1
NELFCD-213ENST00000602795 CCDC88BA6NC98 1476 aa34.37■■■■□ 3.09
NELFCD-213ENST00000602795 ABCC8Q09428 1581 aa34.37■■■■□ 3.09
NELFCD-213ENST00000602795 SMARCA2P51531 1590 aa34.32■■■■□ 3.09
NELFCD-213ENST00000602795 BICRAQ9NZM4 1560 aa34.24■■■■□ 3.07
NELFCD-213ENST00000602795 SOGA1O94964 1423 aa33.99■■■■□ 3.03
NELFCD-213ENST00000602795 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
NELFCD-213ENST00000602795 ZEB1P37275 1124 aaPredicted RBP33.86■■■■□ 3.01
NELFCD-213ENST00000602795 PEG3Q9GZU2 1588 aa33.78■■■■□ 3
NELFCD-213ENST00000602795 TTBK1Q5TCY1 1321 aaPredicted RBP33.75■■■□□ 2.99
NELFCD-213ENST00000602795 CEP162Q5TB80 1403 aa33.73■■■□□ 2.99
NELFCD-213ENST00000602795 CSRNP3Q8WYN3 585 aa33.66■■■□□ 2.98
NELFCD-213ENST00000602795 WRNQ14191 1432 aaPredicted RBP eCLIP33.64■■■□□ 2.98
NELFCD-213ENST00000602795 ATAD2BQ9ULI0 1458 aa33.64■■■□□ 2.98
NELFCD-213ENST00000602795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.62■■■□□ 2.97
NELFCD-213ENST00000602795 TNIKQ9UKE5 1360 aa33.59■■■□□ 2.97
NELFCD-213ENST00000602795 SYNJ1O43426 1573 aa33.59■■■□□ 2.97
NELFCD-213ENST00000602795 UBTFP17480 764 aaKnown RBP33.57■■■□□ 2.96
NELFCD-213ENST00000602795 EEA1Q15075 1411 aa33.53■■■□□ 2.96
NELFCD-213ENST00000602795 BAZ1BQ9UIG0 1483 aaKnown RBP33.53■■■□□ 2.96
NELFCD-213ENST00000602795 GOLGA3Q08378 1498 aa33.43■■■□□ 2.94
NELFCD-213ENST00000602795 CCER1Q8TC90 406 aaPredicted RBP33.4■■■□□ 2.94
NELFCD-213ENST00000602795 CEP164Q9UPV0 1460 aa33.23■■■□□ 2.91
NELFCD-213ENST00000602795 KIF21BO75037 1637 aa33.21■■■□□ 2.91
NELFCD-213ENST00000602795 RAPGEF2Q9Y4G8 1499 aa33.14■■■□□ 2.9
NELFCD-213ENST00000602795 RANGAP1P46060 587 aaPredicted RBP33.1■■■□□ 2.89
NELFCD-213ENST00000602795 CLIP1P30622 1438 aa33.09■■■□□ 2.89
NELFCD-213ENST00000602795 TOP2BQ02880 1626 aa33.08■■■□□ 2.89
NELFCD-213ENST00000602795 NCAPD3P42695 1498 aa32.96■■■□□ 2.87
NELFCD-213ENST00000602795 BIVM-ERCC5R4GMW8 1640 aa32.95■■■□□ 2.87
NELFCD-213ENST00000602795 VPS8Q8N3P4 1428 aa32.91■■■□□ 2.86
NELFCD-213ENST00000602795 HMGXB3Q12766 1538 aa32.9■■■□□ 2.86
NELFCD-213ENST00000602795 HNRNPUL2Q1KMD3 747 aaKnown RBP32.87■■■□□ 2.85
NELFCD-213ENST00000602795 CUX1P39880 1505 aa32.85■■■□□ 2.85
NELFCD-213ENST00000602795 SCAF1Q9H7N4 1312 aaKnown RBP32.76■■■□□ 2.84
NELFCD-213ENST00000602795 PRXQ9BXM0 1461 aa32.73■■■□□ 2.83
NELFCD-213ENST00000602795 DIEXFQ68CQ4 756 aaKnown RBP32.7■■■□□ 2.83
NELFCD-213ENST00000602795 CFTRP13569 1480 aa32.68■■■□□ 2.82
NELFCD-213ENST00000602795 APLP2Q06481 763 aa32.67■■■□□ 2.82
NELFCD-213ENST00000602795 ERICH3Q5RHP9 1530 aa32.65■■■□□ 2.82
NELFCD-213ENST00000602795 ARAP1Q96P48 1450 aa32.63■■■□□ 2.81
NELFCD-213ENST00000602795 KIF27Q86VH2 1401 aa32.55■■■□□ 2.8
NELFCD-213ENST00000602795 KANK4Q5T7N3 995 aaPredicted RBP32.5■■■□□ 2.79
NELFCD-213ENST00000602795 NEUROD1Q13562 356 aa32.45■■■□□ 2.78
NELFCD-213ENST00000602795 ZNF316A6NFI3 1004 aaPredicted RBP32.44■■■□□ 2.78
NELFCD-213ENST00000602795 PRDM2Q13029 1718 aa32.42■■■□□ 2.78
NELFCD-213ENST00000602795 CC2D2AQ9P2K1 1620 aa32.37■■■□□ 2.77
NELFCD-213ENST00000602795 ACIN1Q9UKV3 1341 aaKnown RBP32.36■■■□□ 2.77
NELFCD-213ENST00000602795 CUX2O14529 1486 aa32.34■■■□□ 2.77
NELFCD-213ENST00000602795 ARHGAP35Q9NRY4 1499 aa32.34■■■□□ 2.77
NELFCD-213ENST00000602795 CADPSQ9ULU8 1353 aa32.34■■■□□ 2.77
NELFCD-213ENST00000602795 IGF1RP08069 1367 aa32.28■■■□□ 2.76
NELFCD-213ENST00000602795 FGD5Q6ZNL6 1462 aa32.24■■■□□ 2.75
NELFCD-213ENST00000602795 DHX57Q6P158 1386 aaKnown RBP32.16■■■□□ 2.74
NELFCD-213ENST00000602795 RRBP1Q9P2E9 1410 aaKnown RBP32.13■■■□□ 2.73
NELFCD-213ENST00000602795 CARMIL1Q5VZK9 1371 aa32.11■■■□□ 2.73
NELFCD-213ENST00000602795 MIER1Q8N108 512 aa32.1■■■□□ 2.73
NELFCD-213ENST00000602795 ITGAEP38570 1179 aa32.06■■■□□ 2.72
NELFCD-213ENST00000602795 FANCD2Q9BXW9 1451 aa32.05■■■□□ 2.72
NELFCD-213ENST00000602795 CENPBP07199 599 aaPredicted RBP32.05■■■□□ 2.72
NELFCD-213ENST00000602795 YTHDC1Q96MU7 727 aaKnown RBP32.05■■■□□ 2.72
NELFCD-213ENST00000602795 GTF3C3Q9Y5Q9 886 aa32.05■■■□□ 2.72
NELFCD-213ENST00000602795 NESP48681 1621 aa32.03■■■□□ 2.72
NELFCD-213ENST00000602795 CCNB3Q8WWL7 1395 aa32.02■■■□□ 2.72
NELFCD-213ENST00000602795 RAD54L2Q9Y4B4 1467 aa32■■■□□ 2.71
NELFCD-213ENST00000602795 P3H3Q8IVL6 736 aa31.97■■■□□ 2.71
NELFCD-213ENST00000602795 TIAM1Q13009 1591 aa31.95■■■□□ 2.7
NELFCD-213ENST00000602795 DNAJC5BQ9UF47 199 aa31.89■■■□□ 2.7
NELFCD-213ENST00000602795 CLSPNQ9HAW4 1339 aa31.88■■■□□ 2.69
NELFCD-213ENST00000602795 POLA1P09884 1462 aaPredicted RBP31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms