RNA–Protein interactions for RNA: ENST00000522959.5

ARFGAP1-216, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 556 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-216ENST00000522959 NISCHQ9Y2I1 1504 aa38.72■■■■□ 3.79
ARFGAP1-216ENST00000522959 CCDC180Q9P1Z9 1646 aa34.57■■■■□ 3.12
ARFGAP1-216ENST00000522959 ABCC9O60706 1549 aa34.3■■■■□ 3.08
ARFGAP1-216ENST00000522959 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.82
ARFGAP1-216ENST00000522959 NACADO15069 1562 aa32.56■■■□□ 2.8
ARFGAP1-216ENST00000522959 DCAF8L2P0C7V8 631 aa32.49■■■□□ 2.79
ARFGAP1-216ENST00000522959 UNC13AQ9UPW8 1703 aa32.23■■■□□ 2.75
ARFGAP1-216ENST00000522959 MYO15BQ96JP2 1530 aa32.2■■■□□ 2.74
ARFGAP1-216ENST00000522959 ZCCHC6Q5VYS8 1495 aaKnown RBP32.15■■■□□ 2.74
ARFGAP1-216ENST00000522959 DNAJC5BQ9UF47 199 aa32.03■■■□□ 2.72
ARFGAP1-216ENST00000522959 PABPN1Q86U42 306 aaKnown RBP eCLIP32.01■■■□□ 2.71
ARFGAP1-216ENST00000522959 DCAF1Q9Y4B6 1507 aa31.94■■■□□ 2.7
ARFGAP1-216ENST00000522959 BICRAQ9NZM4 1560 aa31.92■■■□□ 2.7
ARFGAP1-216ENST00000522959 SCRIBQ14160 1630 aa31.58■■■□□ 2.65
ARFGAP1-216ENST00000522959 SHROOM4Q9ULL8 1493 aa31.24■■■□□ 2.59
ARFGAP1-216ENST00000522959 CC2D2AQ9P2K1 1620 aa31.02■■■□□ 2.56
ARFGAP1-216ENST00000522959 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
ARFGAP1-216ENST00000522959 CECR2Q9BXF3 1484 aa30.81■■■□□ 2.52
ARFGAP1-216ENST00000522959 SMARCA4P51532 1647 aa30.15■■■□□ 2.42
ARFGAP1-216ENST00000522959 NCAPD3P42695 1498 aa30.09■■■□□ 2.41
ARFGAP1-216ENST00000522959 ATAD2BQ9ULI0 1458 aa30.07■■■□□ 2.4
ARFGAP1-216ENST00000522959 BAZ1AQ9NRL2 1556 aaPredicted RBP29.96■■■□□ 2.39
ARFGAP1-216ENST00000522959 SMARCA2P51531 1590 aa29.93■■■□□ 2.38
ARFGAP1-216ENST00000522959 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
ARFGAP1-216ENST00000522959 HMGXB3Q12766 1538 aa29.87■■■□□ 2.37
ARFGAP1-216ENST00000522959 PEG3Q9GZU2 1588 aa29.83■■■□□ 2.37
ARFGAP1-216ENST00000522959 BAZ1BQ9UIG0 1483 aaKnown RBP29.74■■■□□ 2.35
ARFGAP1-216ENST00000522959 NESP48681 1621 aa29.63■■■□□ 2.33
ARFGAP1-216ENST00000522959 WIZO95785 1651 aa29.6■■■□□ 2.33
ARFGAP1-216ENST00000522959 ERCC6Q03468 1493 aa29.45■■■□□ 2.31
ARFGAP1-216ENST00000522959 RSF1Q96T23 1441 aaPredicted RBP29.36■■■□□ 2.29
ARFGAP1-216ENST00000522959 LAMC3Q9Y6N6 1575 aa29.34■■■□□ 2.29
ARFGAP1-216ENST00000522959 CUX2O14529 1486 aa29.3■■■□□ 2.28
ARFGAP1-216ENST00000522959 KIF21AQ7Z4S6 1674 aa29.28■■■□□ 2.28
ARFGAP1-216ENST00000522959 THOC2Q8NI27 1593 aaKnown RBP29.22■■■□□ 2.27
ARFGAP1-216ENST00000522959 CADPSQ9ULU8 1353 aa29.17■■■□□ 2.26
ARFGAP1-216ENST00000522959 TOP2AP11388 1531 aaKnown RBP29.12■■■□□ 2.25
ARFGAP1-216ENST00000522959 PDS5BQ9NTI5 1447 aa29.09■■■□□ 2.25
ARFGAP1-216ENST00000522959 DNAJC5Q9H3Z4 198 aa29■■■□□ 2.23
ARFGAP1-216ENST00000522959 CFTRP13569 1480 aa28.93■■■□□ 2.22
ARFGAP1-216ENST00000522959 MRC2Q9UBG0 1479 aa28.87■■■□□ 2.21
ARFGAP1-216ENST00000522959 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
ARFGAP1-216ENST00000522959 FANCD2Q9BXW9 1451 aa28.85■■■□□ 2.21
ARFGAP1-216ENST00000522959 WDR62O43379 1518 aa28.84■■■□□ 2.21
ARFGAP1-216ENST00000522959 CEP164Q9UPV0 1460 aa28.81■■■□□ 2.2
ARFGAP1-216ENST00000522959 PRDM2Q13029 1718 aa28.76■■■□□ 2.19
ARFGAP1-216ENST00000522959 URB2Q14146 1524 aaKnown RBP28.67■■■□□ 2.18
ARFGAP1-216ENST00000522959 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
ARFGAP1-216ENST00000522959 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
ARFGAP1-216ENST00000522959 DNMBPQ6XZF7 1577 aa28.28■■■□□ 2.12
ARFGAP1-216ENST00000522959 ZNF608Q9ULD9 1512 aaPredicted RBP28.28■■■□□ 2.12
ARFGAP1-216ENST00000522959 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
ARFGAP1-216ENST00000522959 ABCC8Q09428 1581 aa28.2■■■□□ 2.11
ARFGAP1-216ENST00000522959 TARBP1Q13395 1621 aaKnown RBP28.17■■■□□ 2.1
ARFGAP1-216ENST00000522959 POLA1P09884 1462 aaPredicted RBP28.11■■■□□ 2.09
ARFGAP1-216ENST00000522959 EIF4G3O43432 1585 aaKnown RBP28.1■■■□□ 2.09
ARFGAP1-216ENST00000522959 RAD54L2Q9Y4B4 1467 aa28.06■■■□□ 2.08
ARFGAP1-216ENST00000522959 CUX1P39880 1505 aa28.06■■■□□ 2.08
ARFGAP1-216ENST00000522959 AQRO60306 1485 aaKnown RBP eCLIP28.04■■■□□ 2.088e-15■■■■□ 21.7
ARFGAP1-216ENST00000522959 OSCARQ8IYS5 282 aa28.02■■■□□ 2.08
ARFGAP1-216ENST00000522959 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
ARFGAP1-216ENST00000522959 SOGA1O94964 1423 aa27.95■■■□□ 2.07
ARFGAP1-216ENST00000522959 CHD1O14646 1710 aa27.89■■■□□ 2.06
ARFGAP1-216ENST00000522959 TDRD9Q8NDG6 1382 aaKnown RBP27.89■■■□□ 2.06
ARFGAP1-216ENST00000522959 TRIM41Q8WV44 630 aa27.85■■■□□ 2.05
ARFGAP1-216ENST00000522959 WDR97A6NE52 1622 aa27.85■■■□□ 2.05
ARFGAP1-216ENST00000522959 RIMBP3CA6NJZ7 1639 aa27.76■■■□□ 2.03
ARFGAP1-216ENST00000522959 RIMBP3BA6NNM3 1639 aa27.76■■■□□ 2.03
ARFGAP1-216ENST00000522959 RIMBP3Q9UFD9 1639 aa27.76■■■□□ 2.03
ARFGAP1-216ENST00000522959 SNAPC4Q5SXM2 1469 aa27.71■■■□□ 2.03
ARFGAP1-216ENST00000522959 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
ARFGAP1-216ENST00000522959 BIVM-ERCC5R4GMW8 1640 aa27.68■■■□□ 2.02
ARFGAP1-216ENST00000522959 FBLN2P98095 1184 aa27.68■■■□□ 2.02
ARFGAP1-216ENST00000522959 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
ARFGAP1-216ENST00000522959 TOP2BQ02880 1626 aa27.66■■■□□ 2.02
ARFGAP1-216ENST00000522959 ARHGEF11O15085 1522 aa27.66■■■□□ 2.02
ARFGAP1-216ENST00000522959 ABCA10Q8WWZ4 1543 aa27.66■■■□□ 2.02
ARFGAP1-216ENST00000522959 GRIN2BQ13224 1484 aa27.64■■■□□ 2.01
ARFGAP1-216ENST00000522959 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
ARFGAP1-216ENST00000522959 WRNQ14191 1432 aaPredicted RBP eCLIP27.61■■■□□ 2.01
ARFGAP1-216ENST00000522959 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
ARFGAP1-216ENST00000522959 MAGI1Q96QZ7 1491 aaPredicted RBP27.58■■■□□ 2.01
ARFGAP1-216ENST00000522959 CLASP1Q7Z460 1538 aa27.52■■■□□ 2
ARFGAP1-216ENST00000522959 SYNJ2O15056 1496 aa27.51■■■□□ 2
ARFGAP1-216ENST00000522959 CHMP7Q8WUX9 453 aaPredicted RBP27.51■■□□□ 1.99
ARFGAP1-216ENST00000522959 ARAP1Q96P48 1450 aa27.44■■□□□ 1.98
ARFGAP1-216ENST00000522959 CYB5RLQ6IPT4 315 aa27.41■■□□□ 1.98
ARFGAP1-216ENST00000522959 ADAMTS12P58397 1594 aa27.37■■□□□ 1.97
ARFGAP1-216ENST00000522959 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
ARFGAP1-216ENST00000522959 ERICH3Q5RHP9 1530 aa27.29■■□□□ 1.96
ARFGAP1-216ENST00000522959 CEP170Q5SW79 1584 aa27.29■■□□□ 1.96
ARFGAP1-216ENST00000522959 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
ARFGAP1-216ENST00000522959 ERCC6L2Q5T890 1561 aa27.22■■□□□ 1.95
ARFGAP1-216ENST00000522959 NUP160Q12769 1436 aa27.22■■□□□ 1.95
ARFGAP1-216ENST00000522959 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
ARFGAP1-216ENST00000522959 IGF1RP08069 1367 aa27.09■■□□□ 1.93
ARFGAP1-216ENST00000522959 KIF27Q86VH2 1401 aa27.01■■□□□ 1.91
ARFGAP1-216ENST00000522959 RUSC2Q8N2Y8 1516 aa26.99■■□□□ 1.91
ARFGAP1-216ENST00000522959 CUL7Q14999 1698 aa26.95■■□□□ 1.91
ARFGAP1-216ENST00000522959 TRHP20396 242 aaPredicted RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms