RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 NISCHQ9Y2I1 1504 aa40.14■■■■■ 4.02
CPNE7-201ENST00000268720 CCDC180Q9P1Z9 1646 aa34.19■■■■□ 3.06
CPNE7-201ENST00000268720 SHROOM4Q9ULL8 1493 aa34.11■■■■□ 3.05
CPNE7-201ENST00000268720 ZCCHC6Q5VYS8 1495 aaKnown RBP33.9■■■■□ 3.02
CPNE7-201ENST00000268720 DCAF8L2P0C7V8 631 aa33.45■■■□□ 2.95
CPNE7-201ENST00000268720 SUPT5HO00267 1087 aaKnown RBP33.43■■■□□ 2.94
CPNE7-201ENST00000268720 DCAF1Q9Y4B6 1507 aa32.88■■■□□ 2.85
CPNE7-201ENST00000268720 CHIC1Q5VXU3 224 aa32.21■■■□□ 2.75
CPNE7-201ENST00000268720 MYO15BQ96JP2 1530 aa32.14■■■□□ 2.74
CPNE7-201ENST00000268720 SCRIBQ14160 1630 aa32.08■■■□□ 2.73
CPNE7-201ENST00000268720 ABCC9O60706 1549 aa32.04■■■□□ 2.72
CPNE7-201ENST00000268720 NACADO15069 1562 aa31.7■■■□□ 2.67
CPNE7-201ENST00000268720 RSF1Q96T23 1441 aaPredicted RBP31.69■■■□□ 2.66
CPNE7-201ENST00000268720 LOC105371045A0A1W2PR82 267 aa31.61■■■□□ 2.65
CPNE7-201ENST00000268720 PCGF6Q9BYE7 350 aa31.59■■■□□ 2.65
CPNE7-201ENST00000268720 CECR2Q9BXF3 1484 aa31.4■■■□□ 2.62
CPNE7-201ENST00000268720 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
CPNE7-201ENST00000268720 EHMT2Q96KQ7 1210 aa31.27■■■□□ 2.6
CPNE7-201ENST00000268720 HRCP23327 699 aa31.25■■■□□ 2.59
CPNE7-201ENST00000268720 PPARGC1BQ86YN6 1023 aaKnown RBP31.24■■■□□ 2.59
CPNE7-201ENST00000268720 MROH2BQ7Z745 1585 aa31.23■■■□□ 2.59
CPNE7-201ENST00000268720 FAM9AQ8IZU1 332 aaPredicted RBP31.08■■■□□ 2.57
CPNE7-201ENST00000268720 WIZO95785 1651 aa31.03■■■□□ 2.56
CPNE7-201ENST00000268720 TRIM41Q8WV44 630 aa30.99■■■□□ 2.55
CPNE7-201ENST00000268720 BAZ1AQ9NRL2 1556 aaPredicted RBP30.83■■■□□ 2.53
CPNE7-201ENST00000268720 UNC13AQ9UPW8 1703 aa30.82■■■□□ 2.52
CPNE7-201ENST00000268720 SMARCA4P51532 1647 aa30.62■■■□□ 2.49
CPNE7-201ENST00000268720 PABPN1Q86U42 306 aaKnown RBP eCLIP30.62■■■□□ 2.49
CPNE7-201ENST00000268720 TOP2AP11388 1531 aaKnown RBP30.49■■■□□ 2.47
CPNE7-201ENST00000268720 BICRAQ9NZM4 1560 aa30.48■■■□□ 2.47
CPNE7-201ENST00000268720 EIF4G1Q04637 1599 aaKnown RBP30.46■■■□□ 2.47
CPNE7-201ENST00000268720 TRIM26Q12899 539 aaPredicted RBP30.43■■■□□ 2.46
CPNE7-201ENST00000268720 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
CPNE7-201ENST00000268720 SMARCA2P51531 1590 aa30.35■■■□□ 2.45
CPNE7-201ENST00000268720 ABCC8Q09428 1581 aa30.27■■■□□ 2.44
CPNE7-201ENST00000268720 TTBK1Q5TCY1 1321 aaPredicted RBP30.18■■■□□ 2.42
CPNE7-201ENST00000268720 PEG3Q9GZU2 1588 aa30.03■■■□□ 2.4
CPNE7-201ENST00000268720 ATAD2BQ9ULI0 1458 aa29.94■■■□□ 2.38
CPNE7-201ENST00000268720 SOGA1O94964 1423 aa29.93■■■□□ 2.38
CPNE7-201ENST00000268720 RUSC2Q8N2Y8 1516 aa29.82■■■□□ 2.36
CPNE7-201ENST00000268720 BAZ1BQ9UIG0 1483 aaKnown RBP29.82■■■□□ 2.36
CPNE7-201ENST00000268720 WRNQ14191 1432 aaPredicted RBP eCLIP29.75■■■□□ 2.35
CPNE7-201ENST00000268720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.75■■■□□ 2.35
CPNE7-201ENST00000268720 CSRNP3Q8WYN3 585 aa29.7■■■□□ 2.34
CPNE7-201ENST00000268720 ZEB1P37275 1124 aaPredicted RBP29.67■■■□□ 2.34
CPNE7-201ENST00000268720 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
CPNE7-201ENST00000268720 CEP162Q5TB80 1403 aa29.61■■■□□ 2.33
CPNE7-201ENST00000268720 EEA1Q15075 1411 aa29.61■■■□□ 2.33
CPNE7-201ENST00000268720 UBTFP17480 764 aaKnown RBP29.57■■■□□ 2.32
CPNE7-201ENST00000268720 TNIKQ9UKE5 1360 aa29.56■■■□□ 2.32
CPNE7-201ENST00000268720 CCER1Q8TC90 406 aaPredicted RBP29.46■■■□□ 2.31
CPNE7-201ENST00000268720 RANGAP1P46060 587 aaPredicted RBP29.44■■■□□ 2.3
CPNE7-201ENST00000268720 GOLGA3Q08378 1498 aa29.43■■■□□ 2.3
CPNE7-201ENST00000268720 NCAPD3P42695 1498 aa29.39■■■□□ 2.3
CPNE7-201ENST00000268720 HMGXB3Q12766 1538 aa29.32■■■□□ 2.28
CPNE7-201ENST00000268720 CEP164Q9UPV0 1460 aa29.3■■■□□ 2.28
CPNE7-201ENST00000268720 TOP2BQ02880 1626 aa29.25■■■□□ 2.27
CPNE7-201ENST00000268720 KIF21BO75037 1637 aa29.24■■■□□ 2.27
CPNE7-201ENST00000268720 RAPGEF2Q9Y4G8 1499 aa29.2■■■□□ 2.26
CPNE7-201ENST00000268720 BIVM-ERCC5R4GMW8 1640 aa29.13■■■□□ 2.25
CPNE7-201ENST00000268720 CLIP1P30622 1438 aa29.12■■■□□ 2.25
CPNE7-201ENST00000268720 SCAF1Q9H7N4 1312 aaKnown RBP29.1■■■□□ 2.25
CPNE7-201ENST00000268720 CFTRP13569 1480 aa29.08■■■□□ 2.25
CPNE7-201ENST00000268720 CUX1P39880 1505 aa29.07■■■□□ 2.24
CPNE7-201ENST00000268720 HNRNPUL2Q1KMD3 747 aaKnown RBP29.02■■■□□ 2.24
CPNE7-201ENST00000268720 VPS8Q8N3P4 1428 aa28.94■■■□□ 2.22
CPNE7-201ENST00000268720 PRXQ9BXM0 1461 aa28.92■■■□□ 2.22
CPNE7-201ENST00000268720 KIF27Q86VH2 1401 aa28.84■■■□□ 2.21
CPNE7-201ENST00000268720 DIEXFQ68CQ4 756 aaKnown RBP28.83■■■□□ 2.21
CPNE7-201ENST00000268720 ERICH3Q5RHP9 1530 aa28.83■■■□□ 2.21
CPNE7-201ENST00000268720 CADPSQ9ULU8 1353 aa28.82■■■□□ 2.2
CPNE7-201ENST00000268720 CC2D2AQ9P2K1 1620 aa28.81■■■□□ 2.2
CPNE7-201ENST00000268720 APLP2Q06481 763 aa28.77■■■□□ 2.2
CPNE7-201ENST00000268720 NEUROD1Q13562 356 aa28.77■■■□□ 2.2
CPNE7-201ENST00000268720 PRDM2Q13029 1718 aa28.73■■■□□ 2.19
CPNE7-201ENST00000268720 ARAP1Q96P48 1450 aa28.69■■■□□ 2.18
CPNE7-201ENST00000268720 YTHDC1Q96MU7 727 aaKnown RBP28.68■■■□□ 2.18
CPNE7-201ENST00000268720 CUX2O14529 1486 aa28.66■■■□□ 2.18
CPNE7-201ENST00000268720 ACIN1Q9UKV3 1341 aaKnown RBP28.62■■■□□ 2.17
CPNE7-201ENST00000268720 FGD5Q6ZNL6 1462 aa28.61■■■□□ 2.17
CPNE7-201ENST00000268720 IGF1RP08069 1367 aa28.6■■■□□ 2.17
CPNE7-201ENST00000268720 KANK4Q5T7N3 995 aaPredicted RBP28.57■■■□□ 2.16
CPNE7-201ENST00000268720 FANCD2Q9BXW9 1451 aa28.54■■■□□ 2.16
CPNE7-201ENST00000268720 ARHGAP35Q9NRY4 1499 aa28.52■■■□□ 2.16
CPNE7-201ENST00000268720 NESP48681 1621 aa28.49■■■□□ 2.15
CPNE7-201ENST00000268720 GTF3C3Q9Y5Q9 886 aa28.47■■■□□ 2.15
CPNE7-201ENST00000268720 CARMIL1Q5VZK9 1371 aa28.46■■■□□ 2.15
CPNE7-201ENST00000268720 PELP1Q8IZL8 1130 aaKnown RBP28.44■■■□□ 2.14
CPNE7-201ENST00000268720 ZNF316A6NFI3 1004 aaPredicted RBP28.43■■■□□ 2.14
CPNE7-201ENST00000268720 ITGAEP38570 1179 aa28.39■■■□□ 2.14
CPNE7-201ENST00000268720 RAD54L2Q9Y4B4 1467 aa28.39■■■□□ 2.13
CPNE7-201ENST00000268720 CENPBP07199 599 aaPredicted RBP28.34■■■□□ 2.13
CPNE7-201ENST00000268720 MIER1Q8N108 512 aa28.34■■■□□ 2.13
CPNE7-201ENST00000268720 DNAJC5BQ9UF47 199 aa28.34■■■□□ 2.13
CPNE7-201ENST00000268720 TOPBP1Q92547 1522 aa28.32■■■□□ 2.12
CPNE7-201ENST00000268720 DNMBPQ6XZF7 1577 aa28.31■■■□□ 2.12
CPNE7-201ENST00000268720 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
CPNE7-201ENST00000268720 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
CPNE7-201ENST00000268720 P3H3Q8IVL6 736 aa28.23■■■□□ 2.11
CPNE7-201ENST00000268720 RRBP1Q9P2E9 1410 aaKnown RBP28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms