RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 NISCHQ9Y2I1 1504 aa42.6■■■■■ 4.41
CIRBP-203ENST00000444172 CCDC180Q9P1Z9 1646 aa37.67■■■■□ 3.62
CIRBP-203ENST00000444172 ABCC9O60706 1549 aa36.59■■■■□ 3.45
CIRBP-203ENST00000444172 DCAF8L2P0C7V8 631 aa35.66■■■■□ 3.3
CIRBP-203ENST00000444172 ZCCHC6Q5VYS8 1495 aaKnown RBP35.54■■■■□ 3.28
CIRBP-203ENST00000444172 NACADO15069 1562 aa35.34■■■■□ 3.25
CIRBP-203ENST00000444172 RB1CC1Q8TDY2 1594 aa35.31■■■■□ 3.24
CIRBP-203ENST00000444172 DCAF1Q9Y4B6 1507 aa35.2■■■■□ 3.23
CIRBP-203ENST00000444172 MYO15BQ96JP2 1530 aa35.17■■■■□ 3.22
CIRBP-203ENST00000444172 UNC13AQ9UPW8 1703 aa34.55■■■■□ 3.12
CIRBP-203ENST00000444172 SCRIBQ14160 1630 aa34.5■■■■□ 3.11
CIRBP-203ENST00000444172 PABPN1Q86U42 306 aaKnown RBP eCLIP34.32■■■■□ 3.081e-14■■□□□ 14.3
CIRBP-203ENST00000444172 BICRAQ9NZM4 1560 aa34.2■■■■□ 3.07
CIRBP-203ENST00000444172 SHROOM4Q9ULL8 1493 aa34.05■■■■□ 3.04
CIRBP-203ENST00000444172 EIF4G1Q04637 1599 aaKnown RBP33.29■■■□□ 2.92
CIRBP-203ENST00000444172 DNAJC5BQ9UF47 199 aa33.24■■■□□ 2.91
CIRBP-203ENST00000444172 CECR2Q9BXF3 1484 aa33.18■■■□□ 2.9
CIRBP-203ENST00000444172 CC2D2AQ9P2K1 1620 aa33.09■■■□□ 2.89
CIRBP-203ENST00000444172 BAZ1AQ9NRL2 1556 aaPredicted RBP33■■■□□ 2.87
CIRBP-203ENST00000444172 SMARCA4P51532 1647 aa32.98■■■□□ 2.87
CIRBP-203ENST00000444172 MROH2BQ7Z745 1585 aa32.87■■■□□ 2.85
CIRBP-203ENST00000444172 ATAD2BQ9ULI0 1458 aa32.69■■■□□ 2.82
CIRBP-203ENST00000444172 SMARCA2P51531 1590 aa32.67■■■□□ 2.82
CIRBP-203ENST00000444172 RSF1Q96T23 1441 aaPredicted RBP32.62■■■□□ 2.81
CIRBP-203ENST00000444172 NCAPD3P42695 1498 aa32.59■■■□□ 2.81
CIRBP-203ENST00000444172 PEG3Q9GZU2 1588 aa32.58■■■□□ 2.81
CIRBP-203ENST00000444172 WIZO95785 1651 aa32.57■■■□□ 2.8
CIRBP-203ENST00000444172 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
CIRBP-203ENST00000444172 HMGXB3Q12766 1538 aa32.46■■■□□ 2.79
CIRBP-203ENST00000444172 SUPT5HO00267 1087 aaKnown RBP32.26■■■□□ 2.75
CIRBP-203ENST00000444172 TOP2AP11388 1531 aaKnown RBP32.18■■■□□ 2.74
CIRBP-203ENST00000444172 CCDC88BA6NC98 1476 aa31.84■■■□□ 2.69
CIRBP-203ENST00000444172 NESP48681 1621 aa31.78■■■□□ 2.68
CIRBP-203ENST00000444172 CADPSQ9ULU8 1353 aa31.71■■■□□ 2.67
CIRBP-203ENST00000444172 LAMC3Q9Y6N6 1575 aa31.69■■■□□ 2.66
CIRBP-203ENST00000444172 CFTRP13569 1480 aa31.57■■■□□ 2.64
CIRBP-203ENST00000444172 ERCC6Q03468 1493 aa31.52■■■□□ 2.64
CIRBP-203ENST00000444172 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
CIRBP-203ENST00000444172 KIF21AQ7Z4S6 1674 aa31.41■■■□□ 2.62
CIRBP-203ENST00000444172 PRDM2Q13029 1718 aa31.4■■■□□ 2.62
CIRBP-203ENST00000444172 FANCD2Q9BXW9 1451 aa31.35■■■□□ 2.61
CIRBP-203ENST00000444172 CEP164Q9UPV0 1460 aa31.27■■■□□ 2.6
CIRBP-203ENST00000444172 MRC2Q9UBG0 1479 aa31.14■■■□□ 2.57
CIRBP-203ENST00000444172 THOC2Q8NI27 1593 aaKnown RBP31.13■■■□□ 2.57
CIRBP-203ENST00000444172 URB2Q14146 1524 aaKnown RBP31■■■□□ 2.55
CIRBP-203ENST00000444172 WDR62O43379 1518 aa30.98■■■□□ 2.55
CIRBP-203ENST00000444172 CUX2O14529 1486 aa30.95■■■□□ 2.55
CIRBP-203ENST00000444172 ABCC8Q09428 1581 aa30.89■■■□□ 2.54
CIRBP-203ENST00000444172 TOPBP1Q92547 1522 aa30.88■■■□□ 2.53
CIRBP-203ENST00000444172 DNMBPQ6XZF7 1577 aa30.88■■■□□ 2.53
CIRBP-203ENST00000444172 CUX1P39880 1505 aa30.8■■■□□ 2.52
CIRBP-203ENST00000444172 WRNQ14191 1432 aaPredicted RBP eCLIP30.77■■■□□ 2.52
CIRBP-203ENST00000444172 SYNJ1O43426 1573 aa30.66■■■□□ 2.5
CIRBP-203ENST00000444172 FGD5Q6ZNL6 1462 aa30.65■■■□□ 2.5
CIRBP-203ENST00000444172 POLA1P09884 1462 aaPredicted RBP30.64■■■□□ 2.5
CIRBP-203ENST00000444172 TOP2BQ02880 1626 aa30.63■■■□□ 2.49
CIRBP-203ENST00000444172 BIVM-ERCC5R4GMW8 1640 aa30.62■■■□□ 2.49
CIRBP-203ENST00000444172 IFT140Q96RY7 1462 aa30.59■■■□□ 2.49
CIRBP-203ENST00000444172 SOGA1O94964 1423 aa30.57■■■□□ 2.48
CIRBP-203ENST00000444172 RAD54L2Q9Y4B4 1467 aa30.56■■■□□ 2.48
CIRBP-203ENST00000444172 TARBP1Q13395 1621 aaKnown RBP30.5■■■□□ 2.47
CIRBP-203ENST00000444172 ZNF608Q9ULD9 1512 aaPredicted RBP30.45■■■□□ 2.47
CIRBP-203ENST00000444172 TRIM41Q8WV44 630 aa30.41■■■□□ 2.46
CIRBP-203ENST00000444172 TDRD9Q8NDG6 1382 aaKnown RBP30.38■■■□□ 2.45
CIRBP-203ENST00000444172 AQRO60306 1485 aaKnown RBP eCLIP30.35■■■□□ 2.456e-15■■■■■ 35.7
CIRBP-203ENST00000444172 WDR97A6NE52 1622 aa30.33■■■□□ 2.45
CIRBP-203ENST00000444172 ABCA10Q8WWZ4 1543 aa30.33■■■□□ 2.45
CIRBP-203ENST00000444172 EIF4G3O43432 1585 aaKnown RBP30.32■■■□□ 2.45
CIRBP-203ENST00000444172 CHIC1Q5VXU3 224 aa30.26■■■□□ 2.43
CIRBP-203ENST00000444172 GAPVD1Q14C86 1478 aa30.21■■■□□ 2.43
CIRBP-203ENST00000444172 ABCA5Q8WWZ7 1642 aa30.17■■■□□ 2.42
CIRBP-203ENST00000444172 GRIN2BQ13224 1484 aa30.13■■■□□ 2.41
CIRBP-203ENST00000444172 PBRM1Q86U86 1689 aa30.13■■■□□ 2.41
CIRBP-203ENST00000444172 KIF27Q86VH2 1401 aa30.09■■■□□ 2.41
CIRBP-203ENST00000444172 SNAPC4Q5SXM2 1469 aa30.06■■■□□ 2.4
CIRBP-203ENST00000444172 FBLN2P98095 1184 aa30.01■■■□□ 2.39
CIRBP-203ENST00000444172 MAGI1Q96QZ7 1491 aaPredicted RBP29.99■■■□□ 2.39
CIRBP-203ENST00000444172 ERICH3Q5RHP9 1530 aa29.98■■■□□ 2.39
CIRBP-203ENST00000444172 RUSC2Q8N2Y8 1516 aa29.98■■■□□ 2.39
CIRBP-203ENST00000444172 CHMP7Q8WUX9 453 aaPredicted RBP29.94■■■□□ 2.38
CIRBP-203ENST00000444172 IGF1RP08069 1367 aa29.92■■■□□ 2.38
CIRBP-203ENST00000444172 CHD1O14646 1710 aa29.91■■■□□ 2.38
CIRBP-203ENST00000444172 SYNJ2O15056 1496 aa29.88■■■□□ 2.37
CIRBP-203ENST00000444172 ADAMTS12P58397 1594 aa29.86■■■□□ 2.37
CIRBP-203ENST00000444172 OSCARQ8IYS5 282 aa29.86■■■□□ 2.37
CIRBP-203ENST00000444172 FHAD1B1AJZ9 1412 aa29.86■■■□□ 2.37
CIRBP-203ENST00000444172 FAM9AQ8IZU1 332 aaPredicted RBP29.83■■■□□ 2.37
CIRBP-203ENST00000444172 CUL7Q14999 1698 aa29.8■■■□□ 2.36
CIRBP-203ENST00000444172 CARMIL1Q5VZK9 1371 aa29.78■■■□□ 2.36
CIRBP-203ENST00000444172 EEA1Q15075 1411 aa29.75■■■□□ 2.35
CIRBP-203ENST00000444172 CSRNP3Q8WYN3 585 aa29.74■■■□□ 2.35
CIRBP-203ENST00000444172 GRIN2AQ12879 1464 aa29.74■■■□□ 2.35
CIRBP-203ENST00000444172 RAPGEF2Q9Y4G8 1499 aa29.63■■■□□ 2.33
CIRBP-203ENST00000444172 DNAJC5Q9H3Z4 198 aa29.62■■■□□ 2.33
CIRBP-203ENST00000444172 CEP170Q5SW79 1584 aa29.58■■■□□ 2.33
CIRBP-203ENST00000444172 PRXQ9BXM0 1461 aa29.57■■■□□ 2.32
CIRBP-203ENST00000444172 NUP160Q12769 1436 aa29.56■■■□□ 2.32
CIRBP-203ENST00000444172 CLASP1Q7Z460 1538 aa29.51■■■□□ 2.32
CIRBP-203ENST00000444172 EHMT2Q96KQ7 1210 aa29.48■■■□□ 2.31
CIRBP-203ENST00000444172 KIF21BO75037 1637 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms