RNA–Protein interactions for RNA: ENST00000640476.1

CROCCP2-207, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 1,750 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-207ENST00000640476 NISCHQ9Y2I1 1504 aa47.58■■■■■ 5.21
CROCCP2-207ENST00000640476 CCDC180Q9P1Z9 1646 aa41.8■■■■■ 4.28
CROCCP2-207ENST00000640476 ABCC9O60706 1549 aa40.39■■■■■ 4.06
CROCCP2-207ENST00000640476 ZCCHC6Q5VYS8 1495 aaKnown RBP39.79■■■■□ 3.96
CROCCP2-207ENST00000640476 DCAF8L2P0C7V8 631 aa39.68■■■■□ 3.94
CROCCP2-207ENST00000640476 DCAF1Q9Y4B6 1507 aa39.22■■■■□ 3.87
CROCCP2-207ENST00000640476 NACADO15069 1562 aa39.09■■■■□ 3.85
CROCCP2-207ENST00000640476 MYO15BQ96JP2 1530 aa39.01■■■■□ 3.84
CROCCP2-207ENST00000640476 RB1CC1Q8TDY2 1594 aa38.97■■■■□ 3.83
CROCCP2-207ENST00000640476 SCRIBQ14160 1630 aa38.48■■■■□ 3.75
CROCCP2-207ENST00000640476 SHROOM4Q9ULL8 1493 aa38.43■■■■□ 3.74
CROCCP2-207ENST00000640476 UNC13AQ9UPW8 1703 aa38.38■■■■□ 3.73
CROCCP2-207ENST00000640476 PABPN1Q86U42 306 aaKnown RBP eCLIP37.98■■■■□ 3.674e-13■□□□□ 10.5
CROCCP2-207ENST00000640476 BICRAQ9NZM4 1560 aa37.94■■■■□ 3.66
CROCCP2-207ENST00000640476 CECR2Q9BXF3 1484 aa37.15■■■■□ 3.54
CROCCP2-207ENST00000640476 EIF4G1Q04637 1599 aaKnown RBP36.81■■■■□ 3.48
CROCCP2-207ENST00000640476 MROH2BQ7Z745 1585 aa36.81■■■■□ 3.48
CROCCP2-207ENST00000640476 SMARCA4P51532 1647 aa36.77■■■■□ 3.48
CROCCP2-207ENST00000640476 BAZ1AQ9NRL2 1556 aaPredicted RBP36.75■■■■□ 3.47
CROCCP2-207ENST00000640476 RSF1Q96T23 1441 aaPredicted RBP36.63■■■■□ 3.46
CROCCP2-207ENST00000640476 SUPT5HO00267 1087 aaKnown RBP36.53■■■■□ 3.44
CROCCP2-207ENST00000640476 WIZO95785 1651 aa36.51■■■■□ 3.43
CROCCP2-207ENST00000640476 CC2D2AQ9P2K1 1620 aa36.5■■■■□ 3.43
CROCCP2-207ENST00000640476 DNAJC5BQ9UF47 199 aa36.45■■■■□ 3.43
CROCCP2-207ENST00000640476 ATAD2BQ9ULI0 1458 aa36.34■■■■□ 3.41
CROCCP2-207ENST00000640476 PEG3Q9GZU2 1588 aa36.28■■■■□ 3.4
CROCCP2-207ENST00000640476 SMARCA2P51531 1590 aa36.23■■■■□ 3.39
CROCCP2-207ENST00000640476 NCAPD3P42695 1498 aa36.11■■■■□ 3.37
CROCCP2-207ENST00000640476 BAZ1BQ9UIG0 1483 aaKnown RBP36.08■■■■□ 3.37
CROCCP2-207ENST00000640476 HMGXB3Q12766 1538 aa35.98■■■■□ 3.35
CROCCP2-207ENST00000640476 TOP2AP11388 1531 aaKnown RBP35.97■■■■□ 3.35
CROCCP2-207ENST00000640476 CCDC88BA6NC98 1476 aa35.65■■■■□ 3.3
CROCCP2-207ENST00000640476 NESP48681 1621 aa35.26■■■■□ 3.23
CROCCP2-207ENST00000640476 CADPSQ9ULU8 1353 aa35.15■■■■□ 3.22
CROCCP2-207ENST00000640476 CFTRP13569 1480 aa35.11■■■■□ 3.21
CROCCP2-207ENST00000640476 LAMC3Q9Y6N6 1575 aa35.01■■■■□ 3.2
CROCCP2-207ENST00000640476 PRDM2Q13029 1718 aa34.93■■■■□ 3.18
CROCCP2-207ENST00000640476 KIF21AQ7Z4S6 1674 aa34.81■■■■□ 3.16
CROCCP2-207ENST00000640476 FANCD2Q9BXW9 1451 aa34.79■■■■□ 3.16
CROCCP2-207ENST00000640476 ABCC8Q09428 1581 aa34.74■■■■□ 3.15
CROCCP2-207ENST00000640476 PDS5BQ9NTI5 1447 aa34.73■■■■□ 3.15
CROCCP2-207ENST00000640476 ERCC6Q03468 1493 aa34.62■■■■□ 3.13
CROCCP2-207ENST00000640476 CEP164Q9UPV0 1460 aa34.62■■■■□ 3.13
CROCCP2-207ENST00000640476 CHIC1Q5VXU3 224 aa34.5■■■■□ 3.11
CROCCP2-207ENST00000640476 WRNQ14191 1432 aaPredicted RBP eCLIP34.47■■■■□ 3.11
CROCCP2-207ENST00000640476 URB2Q14146 1524 aaKnown RBP34.45■■■■□ 3.11
CROCCP2-207ENST00000640476 SYNJ1O43426 1573 aa34.45■■■■□ 3.11
CROCCP2-207ENST00000640476 CUX1P39880 1505 aa34.45■■■■□ 3.11
CROCCP2-207ENST00000640476 THOC2Q8NI27 1593 aaKnown RBP34.38■■■■□ 3.09
CROCCP2-207ENST00000640476 MRC2Q9UBG0 1479 aa34.37■■■■□ 3.09
CROCCP2-207ENST00000640476 TOPBP1Q92547 1522 aa34.34■■■■□ 3.09
CROCCP2-207ENST00000640476 DNMBPQ6XZF7 1577 aa34.31■■■■□ 3.08
CROCCP2-207ENST00000640476 TRIM41Q8WV44 630 aa34.31■■■■□ 3.08
CROCCP2-207ENST00000640476 TOP2BQ02880 1626 aa34.29■■■■□ 3.08
CROCCP2-207ENST00000640476 BIVM-ERCC5R4GMW8 1640 aa34.27■■■■□ 3.08
CROCCP2-207ENST00000640476 WDR62O43379 1518 aa34.24■■■■□ 3.07
CROCCP2-207ENST00000640476 FGD5Q6ZNL6 1462 aa34.18■■■■□ 3.06
CROCCP2-207ENST00000640476 POLA1P09884 1462 aaPredicted RBP34.13■■■■□ 3.05
CROCCP2-207ENST00000640476 RAD54L2Q9Y4B4 1467 aa34.07■■■■□ 3.04
CROCCP2-207ENST00000640476 CUX2O14529 1486 aa34.04■■■■□ 3.04
CROCCP2-207ENST00000640476 SOGA1O94964 1423 aa33.97■■■■□ 3.03
CROCCP2-207ENST00000640476 TARBP1Q13395 1621 aaKnown RBP33.92■■■■□ 3.02
CROCCP2-207ENST00000640476 RUSC2Q8N2Y8 1516 aa33.87■■■■□ 3.01
CROCCP2-207ENST00000640476 WDR97A6NE52 1622 aa33.83■■■■□ 3.01
CROCCP2-207ENST00000640476 ZNF608Q9ULD9 1512 aaPredicted RBP33.81■■■■□ 3
CROCCP2-207ENST00000640476 FAM9AQ8IZU1 332 aaPredicted RBP33.8■■■■□ 3
CROCCP2-207ENST00000640476 IFT140Q96RY7 1462 aa33.8■■■■□ 3
CROCCP2-207ENST00000640476 TDRD9Q8NDG6 1382 aaKnown RBP33.79■■■■□ 3
CROCCP2-207ENST00000640476 ABCA10Q8WWZ4 1543 aa33.79■■■■□ 3
CROCCP2-207ENST00000640476 AQRO60306 1485 aaKnown RBP eCLIP33.72■■■□□ 2.991e-10■■■■□ 26.4
CROCCP2-207ENST00000640476 ABCA5Q8WWZ7 1642 aa33.63■■■□□ 2.97
CROCCP2-207ENST00000640476 EIF4G3O43432 1585 aaKnown RBP33.63■■■□□ 2.97
CROCCP2-207ENST00000640476 KIF27Q86VH2 1401 aa33.62■■■□□ 2.97
CROCCP2-207ENST00000640476 GAPVD1Q14C86 1478 aa33.59■■■□□ 2.97
CROCCP2-207ENST00000640476 PBRM1Q86U86 1689 aa33.52■■■□□ 2.96
CROCCP2-207ENST00000640476 IGF1RP08069 1367 aa33.48■■■□□ 2.95
CROCCP2-207ENST00000640476 EHMT2Q96KQ7 1210 aa33.46■■■□□ 2.95
CROCCP2-207ENST00000640476 CSRNP3Q8WYN3 585 aa33.44■■■□□ 2.94
CROCCP2-207ENST00000640476 EEA1Q15075 1411 aa33.41■■■□□ 2.94
CROCCP2-207ENST00000640476 GRIN2BQ13224 1484 aa33.41■■■□□ 2.94
CROCCP2-207ENST00000640476 ERICH3Q5RHP9 1530 aa33.36■■■□□ 2.93
CROCCP2-207ENST00000640476 SNAPC4Q5SXM2 1469 aa33.35■■■□□ 2.93
CROCCP2-207ENST00000640476 LOC105371045A0A1W2PR82 267 aa33.27■■■□□ 2.92
CROCCP2-207ENST00000640476 CARMIL1Q5VZK9 1371 aa33.27■■■□□ 2.92
CROCCP2-207ENST00000640476 ADAMTS12P58397 1594 aa33.24■■■□□ 2.91
CROCCP2-207ENST00000640476 PRXQ9BXM0 1461 aa33.24■■■□□ 2.91
CROCCP2-207ENST00000640476 CUL7Q14999 1698 aa33.22■■■□□ 2.91
CROCCP2-207ENST00000640476 RAPGEF2Q9Y4G8 1499 aa33.21■■■□□ 2.91
CROCCP2-207ENST00000640476 MAGI1Q96QZ7 1491 aaPredicted RBP33.19■■■□□ 2.9
CROCCP2-207ENST00000640476 FBLN2P98095 1184 aa33.18■■■□□ 2.9
CROCCP2-207ENST00000640476 FHAD1B1AJZ9 1412 aa33.16■■■□□ 2.9
CROCCP2-207ENST00000640476 KIF21BO75037 1637 aa33.14■■■□□ 2.9
CROCCP2-207ENST00000640476 CHD1O14646 1710 aa33.11■■■□□ 2.89
CROCCP2-207ENST00000640476 SYNJ2O15056 1496 aa33.09■■■□□ 2.89
CROCCP2-207ENST00000640476 CHMP7Q8WUX9 453 aaPredicted RBP33.09■■■□□ 2.89
CROCCP2-207ENST00000640476 GRIN2AQ12879 1464 aa33.03■■■□□ 2.88
CROCCP2-207ENST00000640476 GOLGA3Q08378 1498 aa33.01■■■□□ 2.88
CROCCP2-207ENST00000640476 UBTFP17480 764 aaKnown RBP32.99■■■□□ 2.87
CROCCP2-207ENST00000640476 CEP170Q5SW79 1584 aa32.91■■■□□ 2.86
CROCCP2-207ENST00000640476 RANGAP1P46060 587 aaPredicted RBP32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms