RNA–Protein interactions for RNA: ENST00000545180.5

SPHK1-203, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SPHK1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-203ENST00000545180 NISCHQ9Y2I1 1504 aa43.72■■■■■ 4.59
SPHK1-203ENST00000545180 CCDC180Q9P1Z9 1646 aa37.6■■■■□ 3.61
SPHK1-203ENST00000545180 ZCCHC6Q5VYS8 1495 aaKnown RBP36.88■■■■□ 3.49
SPHK1-203ENST00000545180 SHROOM4Q9ULL8 1493 aa36.46■■■■□ 3.43
SPHK1-203ENST00000545180 DCAF8L2P0C7V8 631 aa36.06■■■■□ 3.36
SPHK1-203ENST00000545180 DCAF1Q9Y4B6 1507 aa36.05■■■■□ 3.36
SPHK1-203ENST00000545180 SUPT5HO00267 1087 aaKnown RBP35.49■■■■□ 3.27
SPHK1-203ENST00000545180 MYO15BQ96JP2 1530 aa35.29■■■■□ 3.24
SPHK1-203ENST00000545180 ABCC9O60706 1549 aa35.04■■■■□ 3.2
SPHK1-203ENST00000545180 NACADO15069 1562 aa34.87■■■■□ 3.17
SPHK1-203ENST00000545180 SCRIBQ14160 1630 aa34.87■■■■□ 3.17
SPHK1-203ENST00000545180 RB1CC1Q8TDY2 1594 aa34.4■■■■□ 3.1
SPHK1-203ENST00000545180 CHIC1Q5VXU3 224 aa34.36■■■■□ 3.09
SPHK1-203ENST00000545180 RSF1Q96T23 1441 aaPredicted RBP34.3■■■■□ 3.08
SPHK1-203ENST00000545180 CECR2Q9BXF3 1484 aa34■■■■□ 3.03
SPHK1-203ENST00000545180 MROH2BQ7Z745 1585 aa33.87■■■■□ 3.01
SPHK1-203ENST00000545180 UNC13AQ9UPW8 1703 aa33.77■■■■□ 3
SPHK1-203ENST00000545180 BAZ1AQ9NRL2 1556 aaPredicted RBP33.65■■■□□ 2.98
SPHK1-203ENST00000545180 WIZO95785 1651 aa33.63■■■□□ 2.97
SPHK1-203ENST00000545180 SMARCA4P51532 1647 aa33.42■■■□□ 2.94
SPHK1-203ENST00000545180 BICRAQ9NZM4 1560 aa33.41■■■□□ 2.94
SPHK1-203ENST00000545180 PABPN1Q86U42 306 aaKnown RBP eCLIP33.29■■■□□ 2.923e-7■■■□□ 17.7
SPHK1-203ENST00000545180 TRIM41Q8WV44 630 aa33.24■■■□□ 2.91
SPHK1-203ENST00000545180 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
SPHK1-203ENST00000545180 LOC105371045A0A1W2PR82 267 aa33.17■■■□□ 2.9
SPHK1-203ENST00000545180 EIF4G1Q04637 1599 aaKnown RBP33.02■■■□□ 2.88
SPHK1-203ENST00000545180 CCDC88BA6NC98 1476 aa32.98■■■□□ 2.87
SPHK1-203ENST00000545180 SMARCA2P51531 1590 aa32.98■■■□□ 2.87
SPHK1-203ENST00000545180 PEG3Q9GZU2 1588 aa32.92■■■□□ 2.86
SPHK1-203ENST00000545180 FAM9AQ8IZU1 332 aaPredicted RBP32.75■■■□□ 2.83
SPHK1-203ENST00000545180 ATAD2BQ9ULI0 1458 aa32.69■■■□□ 2.82
SPHK1-203ENST00000545180 ABCC8Q09428 1581 aa32.6■■■□□ 2.81
SPHK1-203ENST00000545180 BAZ1BQ9UIG0 1483 aaKnown RBP32.55■■■□□ 2.8
SPHK1-203ENST00000545180 PCGF6Q9BYE7 350 aa32.51■■■□□ 2.8
SPHK1-203ENST00000545180 EHMT2Q96KQ7 1210 aa32.34■■■□□ 2.77
SPHK1-203ENST00000545180 NCAPD3P42695 1498 aa32.24■■■□□ 2.75
SPHK1-203ENST00000545180 WRNQ14191 1432 aaPredicted RBP eCLIP32.24■■■□□ 2.75
SPHK1-203ENST00000545180 TRIM26Q12899 539 aaPredicted RBP32.22■■■□□ 2.75
SPHK1-203ENST00000545180 HMGXB3Q12766 1538 aa32.22■■■□□ 2.75
SPHK1-203ENST00000545180 HRCP23327 699 aa32.2■■■□□ 2.75
SPHK1-203ENST00000545180 SOGA1O94964 1423 aa32.18■■■□□ 2.74
SPHK1-203ENST00000545180 EEA1Q15075 1411 aa32.14■■■□□ 2.74
SPHK1-203ENST00000545180 SYNJ1O43426 1573 aa32.07■■■□□ 2.72
SPHK1-203ENST00000545180 RUSC2Q8N2Y8 1516 aa32.02■■■□□ 2.72
SPHK1-203ENST00000545180 CSRNP3Q8WYN3 585 aa32.01■■■□□ 2.71
SPHK1-203ENST00000545180 TNIKQ9UKE5 1360 aa31.87■■■□□ 2.69
SPHK1-203ENST00000545180 TOP2BQ02880 1626 aa31.83■■■□□ 2.69
SPHK1-203ENST00000545180 CEP162Q5TB80 1403 aa31.79■■■□□ 2.68
SPHK1-203ENST00000545180 GOLGA3Q08378 1498 aa31.79■■■□□ 2.68
SPHK1-203ENST00000545180 CFTRP13569 1480 aa31.78■■■□□ 2.68
SPHK1-203ENST00000545180 BIVM-ERCC5R4GMW8 1640 aa31.75■■■□□ 2.67
SPHK1-203ENST00000545180 UBTFP17480 764 aaKnown RBP31.72■■■□□ 2.67
SPHK1-203ENST00000545180 CEP164Q9UPV0 1460 aa31.7■■■□□ 2.66
SPHK1-203ENST00000545180 KIF21BO75037 1637 aa31.69■■■□□ 2.66
SPHK1-203ENST00000545180 CC2D2AQ9P2K1 1620 aa31.66■■■□□ 2.66
SPHK1-203ENST00000545180 CUX1P39880 1505 aa31.6■■■□□ 2.65
SPHK1-203ENST00000545180 PPARGC1BQ86YN6 1023 aaKnown RBP31.58■■■□□ 2.65
SPHK1-203ENST00000545180 PRDM2Q13029 1718 aa31.54■■■□□ 2.64
SPHK1-203ENST00000545180 CADPSQ9ULU8 1353 aa31.51■■■□□ 2.64
SPHK1-203ENST00000545180 RAPGEF2Q9Y4G8 1499 aa31.46■■■□□ 2.63
SPHK1-203ENST00000545180 CLIP1P30622 1438 aa31.35■■■□□ 2.61
SPHK1-203ENST00000545180 PRXQ9BXM0 1461 aa31.33■■■□□ 2.61
SPHK1-203ENST00000545180 KIF27Q86VH2 1401 aa31.33■■■□□ 2.61
SPHK1-203ENST00000545180 ERICH3Q5RHP9 1530 aa31.32■■■□□ 2.6
SPHK1-203ENST00000545180 ZEB1P37275 1124 aaPredicted RBP31.31■■■□□ 2.6
SPHK1-203ENST00000545180 FANCD2Q9BXW9 1451 aa31.18■■■□□ 2.58
SPHK1-203ENST00000545180 VPS8Q8N3P4 1428 aa31.17■■■□□ 2.58
SPHK1-203ENST00000545180 TTBK1Q5TCY1 1321 aaPredicted RBP31.17■■■□□ 2.58
SPHK1-203ENST00000545180 FGD5Q6ZNL6 1462 aa31.12■■■□□ 2.57
SPHK1-203ENST00000545180 CUX2O14529 1486 aa31.1■■■□□ 2.57
SPHK1-203ENST00000545180 RANGAP1P46060 587 aaPredicted RBP31.05■■■□□ 2.56
SPHK1-203ENST00000545180 NESP48681 1621 aa31.04■■■□□ 2.56
SPHK1-203ENST00000545180 IGF1RP08069 1367 aa31.02■■■□□ 2.56
SPHK1-203ENST00000545180 DNMBPQ6XZF7 1577 aa30.99■■■□□ 2.55
SPHK1-203ENST00000545180 LAMC3Q9Y6N6 1575 aa30.96■■■□□ 2.55
SPHK1-203ENST00000545180 ARAP1Q96P48 1450 aa30.93■■■□□ 2.54
SPHK1-203ENST00000545180 APLP2Q06481 763 aa30.93■■■□□ 2.54
SPHK1-203ENST00000545180 TOPBP1Q92547 1522 aa30.92■■■□□ 2.54
SPHK1-203ENST00000545180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.9■■■□□ 2.54
SPHK1-203ENST00000545180 CARMIL1Q5VZK9 1371 aa30.87■■■□□ 2.53
SPHK1-203ENST00000545180 POLA1P09884 1462 aaPredicted RBP30.85■■■□□ 2.53
SPHK1-203ENST00000545180 CCER1Q8TC90 406 aaPredicted RBP30.85■■■□□ 2.53
SPHK1-203ENST00000545180 ABCA10Q8WWZ4 1543 aa30.82■■■□□ 2.53
SPHK1-203ENST00000545180 RAD54L2Q9Y4B4 1467 aa30.81■■■□□ 2.52
SPHK1-203ENST00000545180 DNAJC5BQ9UF47 199 aa30.8■■■□□ 2.52
SPHK1-203ENST00000545180 ARHGAP35Q9NRY4 1499 aa30.78■■■□□ 2.52
SPHK1-203ENST00000545180 URB2Q14146 1524 aaKnown RBP30.75■■■□□ 2.51
SPHK1-203ENST00000545180 PDS5BQ9NTI5 1447 aa30.75■■■□□ 2.51
SPHK1-203ENST00000545180 WDR97A6NE52 1622 aa30.6■■■□□ 2.49
SPHK1-203ENST00000545180 CUL7Q14999 1698 aa30.58■■■□□ 2.49
SPHK1-203ENST00000545180 KIF21AQ7Z4S6 1674 aa30.58■■■□□ 2.49
SPHK1-203ENST00000545180 HNRNPUL2Q1KMD3 747 aaKnown RBP30.57■■■□□ 2.48
SPHK1-203ENST00000545180 KANK4Q5T7N3 995 aaPredicted RBP30.57■■■□□ 2.48
SPHK1-203ENST00000545180 ABCA5Q8WWZ7 1642 aa30.48■■■□□ 2.47
SPHK1-203ENST00000545180 TDRD9Q8NDG6 1382 aaKnown RBP30.46■■■□□ 2.47
SPHK1-203ENST00000545180 GAPVD1Q14C86 1478 aa30.43■■■□□ 2.46
SPHK1-203ENST00000545180 MAP3K1Q13233 1512 aa30.41■■■□□ 2.46
SPHK1-203ENST00000545180 FHAD1B1AJZ9 1412 aa30.38■■■□□ 2.45
SPHK1-203ENST00000545180 RRBP1Q9P2E9 1410 aaKnown RBP30.38■■■□□ 2.45
SPHK1-203ENST00000545180 CTTNBP2Q8WZ74 1663 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms