RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 NISCHQ9Y2I1 1504 aa44.35■■■■■ 4.69
SPHK1-207ENST00000590959 CCDC180Q9P1Z9 1646 aa38.98■■■■□ 3.83
SPHK1-207ENST00000590959 ABCC9O60706 1549 aa37.66■■■■□ 3.62
SPHK1-207ENST00000590959 ZCCHC6Q5VYS8 1495 aaKnown RBP37.09■■■■□ 3.53
SPHK1-207ENST00000590959 DCAF8L2P0C7V8 631 aa36.93■■■■□ 3.5
SPHK1-207ENST00000590959 DCAF1Q9Y4B6 1507 aa36.62■■■■□ 3.45
SPHK1-207ENST00000590959 NACADO15069 1562 aa36.5■■■■□ 3.43
SPHK1-207ENST00000590959 MYO15BQ96JP2 1530 aa36.47■■■■□ 3.43
SPHK1-207ENST00000590959 RB1CC1Q8TDY2 1594 aa36.38■■■■□ 3.41
SPHK1-207ENST00000590959 SCRIBQ14160 1630 aa35.81■■■■□ 3.32
SPHK1-207ENST00000590959 SHROOM4Q9ULL8 1493 aa35.77■■■■□ 3.32
SPHK1-207ENST00000590959 UNC13AQ9UPW8 1703 aa35.69■■■■□ 3.3
SPHK1-207ENST00000590959 PABPN1Q86U42 306 aaKnown RBP eCLIP35.4■■■■□ 3.263e-7■■■□□ 17.7
SPHK1-207ENST00000590959 BICRAQ9NZM4 1560 aa35.37■■■■□ 3.25
SPHK1-207ENST00000590959 CECR2Q9BXF3 1484 aa34.59■■■■□ 3.13
SPHK1-207ENST00000590959 SUPT5HO00267 1087 aaKnown RBP34.42■■■■□ 3.1
SPHK1-207ENST00000590959 EIF4G1Q04637 1599 aaKnown RBP34.34■■■■□ 3.09
SPHK1-207ENST00000590959 MROH2BQ7Z745 1585 aa34.27■■■■□ 3.08
SPHK1-207ENST00000590959 BAZ1AQ9NRL2 1556 aaPredicted RBP34.27■■■■□ 3.08
SPHK1-207ENST00000590959 SMARCA4P51532 1647 aa34.25■■■■□ 3.07
SPHK1-207ENST00000590959 RSF1Q96T23 1441 aaPredicted RBP34.13■■■■□ 3.05
SPHK1-207ENST00000590959 CC2D2AQ9P2K1 1620 aa34.05■■■■□ 3.04
SPHK1-207ENST00000590959 DNAJC5BQ9UF47 199 aa34.04■■■■□ 3.04
SPHK1-207ENST00000590959 WIZO95785 1651 aa33.95■■■■□ 3.02
SPHK1-207ENST00000590959 ATAD2BQ9ULI0 1458 aa33.9■■■■□ 3.02
SPHK1-207ENST00000590959 PEG3Q9GZU2 1588 aa33.85■■■■□ 3.01
SPHK1-207ENST00000590959 SMARCA2P51531 1590 aa33.8■■■■□ 3
SPHK1-207ENST00000590959 NCAPD3P42695 1498 aa33.73■■■□□ 2.99
SPHK1-207ENST00000590959 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
SPHK1-207ENST00000590959 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
SPHK1-207ENST00000590959 TOP2AP11388 1531 aaKnown RBP33.51■■■□□ 2.96
SPHK1-207ENST00000590959 CCDC88BA6NC98 1476 aa33.2■■■□□ 2.91
SPHK1-207ENST00000590959 CHIC1Q5VXU3 224 aa32.92■■■□□ 2.86
SPHK1-207ENST00000590959 NESP48681 1621 aa32.85■■■□□ 2.85
SPHK1-207ENST00000590959 CADPSQ9ULU8 1353 aa32.82■■■□□ 2.84
SPHK1-207ENST00000590959 CFTRP13569 1480 aa32.77■■■□□ 2.84
SPHK1-207ENST00000590959 LAMC3Q9Y6N6 1575 aa32.69■■■□□ 2.82
SPHK1-207ENST00000590959 PRDM2Q13029 1718 aa32.5■■■□□ 2.79
SPHK1-207ENST00000590959 PDS5BQ9NTI5 1447 aa32.45■■■□□ 2.79
SPHK1-207ENST00000590959 FANCD2Q9BXW9 1451 aa32.45■■■□□ 2.79
SPHK1-207ENST00000590959 KIF21AQ7Z4S6 1674 aa32.4■■■□□ 2.78
SPHK1-207ENST00000590959 TRIM41Q8WV44 630 aa32.4■■■□□ 2.78
SPHK1-207ENST00000590959 ERCC6Q03468 1493 aa32.32■■■□□ 2.76
SPHK1-207ENST00000590959 CEP164Q9UPV0 1460 aa32.3■■■□□ 2.76
SPHK1-207ENST00000590959 ABCC8Q09428 1581 aa32.27■■■□□ 2.76
SPHK1-207ENST00000590959 URB2Q14146 1524 aaKnown RBP32.12■■■□□ 2.73
SPHK1-207ENST00000590959 WRNQ14191 1432 aaPredicted RBP eCLIP32.11■■■□□ 2.73
SPHK1-207ENST00000590959 MRC2Q9UBG0 1479 aa32.09■■■□□ 2.73
SPHK1-207ENST00000590959 CUX1P39880 1505 aa32.08■■■□□ 2.73
SPHK1-207ENST00000590959 THOC2Q8NI27 1593 aaKnown RBP32.07■■■□□ 2.72
SPHK1-207ENST00000590959 SYNJ1O43426 1573 aa32.04■■■□□ 2.72
SPHK1-207ENST00000590959 TOPBP1Q92547 1522 aa32.02■■■□□ 2.72
SPHK1-207ENST00000590959 DNMBPQ6XZF7 1577 aa31.99■■■□□ 2.71
SPHK1-207ENST00000590959 WDR62O43379 1518 aa31.97■■■□□ 2.71
SPHK1-207ENST00000590959 TOP2BQ02880 1626 aa31.94■■■□□ 2.7
SPHK1-207ENST00000590959 BIVM-ERCC5R4GMW8 1640 aa31.91■■■□□ 2.7
SPHK1-207ENST00000590959 FGD5Q6ZNL6 1462 aa31.84■■■□□ 2.69
SPHK1-207ENST00000590959 POLA1P09884 1462 aaPredicted RBP31.81■■■□□ 2.68
SPHK1-207ENST00000590959 FAM9AQ8IZU1 332 aaPredicted RBP31.76■■■□□ 2.68
SPHK1-207ENST00000590959 CUX2O14529 1486 aa31.75■■■□□ 2.67
SPHK1-207ENST00000590959 RAD54L2Q9Y4B4 1467 aa31.74■■■□□ 2.67
SPHK1-207ENST00000590959 SOGA1O94964 1423 aa31.69■■■□□ 2.66
SPHK1-207ENST00000590959 LOC105371045A0A1W2PR82 267 aa31.65■■■□□ 2.66
SPHK1-207ENST00000590959 TARBP1Q13395 1621 aaKnown RBP31.61■■■□□ 2.65
SPHK1-207ENST00000590959 EEA1Q15075 1411 aa31.6■■■□□ 2.65
SPHK1-207ENST00000590959 IFT140Q96RY7 1462 aa31.57■■■□□ 2.64
SPHK1-207ENST00000590959 ABCA10Q8WWZ4 1543 aa31.52■■■□□ 2.64
SPHK1-207ENST00000590959 ZNF608Q9ULD9 1512 aaPredicted RBP31.51■■■□□ 2.64
SPHK1-207ENST00000590959 TDRD9Q8NDG6 1382 aaKnown RBP31.5■■■□□ 2.63
SPHK1-207ENST00000590959 WDR97A6NE52 1622 aa31.49■■■□□ 2.63
SPHK1-207ENST00000590959 RUSC2Q8N2Y8 1516 aa31.48■■■□□ 2.63
SPHK1-207ENST00000590959 AQRO60306 1485 aaKnown RBP eCLIP31.42■■■□□ 2.622e-14■■■■■ 57.5
SPHK1-207ENST00000590959 CSRNP3Q8WYN3 585 aa31.42■■■□□ 2.62
SPHK1-207ENST00000590959 KIF27Q86VH2 1401 aa31.35■■■□□ 2.61
SPHK1-207ENST00000590959 EIF4G3O43432 1585 aaKnown RBP31.33■■■□□ 2.61
SPHK1-207ENST00000590959 ABCA5Q8WWZ7 1642 aa31.33■■■□□ 2.61
SPHK1-207ENST00000590959 GAPVD1Q14C86 1478 aa31.32■■■□□ 2.6
SPHK1-207ENST00000590959 EHMT2Q96KQ7 1210 aa31.3■■■□□ 2.6
SPHK1-207ENST00000590959 IGF1RP08069 1367 aa31.22■■■□□ 2.59
SPHK1-207ENST00000590959 PBRM1Q86U86 1689 aa31.18■■■□□ 2.58
SPHK1-207ENST00000590959 GRIN2BQ13224 1484 aa31.18■■■□□ 2.58
SPHK1-207ENST00000590959 KIF21BO75037 1637 aa31.14■■■□□ 2.58
SPHK1-207ENST00000590959 GOLGA3Q08378 1498 aa31.14■■■□□ 2.58
SPHK1-207ENST00000590959 ERICH3Q5RHP9 1530 aa31.12■■■□□ 2.57
SPHK1-207ENST00000590959 SNAPC4Q5SXM2 1469 aa31.09■■■□□ 2.57
SPHK1-207ENST00000590959 TNIKQ9UKE5 1360 aa31.04■■■□□ 2.56
SPHK1-207ENST00000590959 UBTFP17480 764 aaKnown RBP31.03■■■□□ 2.56
SPHK1-207ENST00000590959 PRXQ9BXM0 1461 aa31.02■■■□□ 2.56
SPHK1-207ENST00000590959 CARMIL1Q5VZK9 1371 aa31.02■■■□□ 2.56
SPHK1-207ENST00000590959 MAGI1Q96QZ7 1491 aaPredicted RBP30.99■■■□□ 2.55
SPHK1-207ENST00000590959 RAPGEF2Q9Y4G8 1499 aa30.98■■■□□ 2.55
SPHK1-207ENST00000590959 ADAMTS12P58397 1594 aa30.97■■■□□ 2.55
SPHK1-207ENST00000590959 CUL7Q14999 1698 aa30.95■■■□□ 2.55
SPHK1-207ENST00000590959 FHAD1B1AJZ9 1412 aa30.95■■■□□ 2.55
SPHK1-207ENST00000590959 FBLN2P98095 1184 aa30.92■■■□□ 2.54
SPHK1-207ENST00000590959 SYNJ2O15056 1496 aa30.89■■■□□ 2.54
SPHK1-207ENST00000590959 CHMP7Q8WUX9 453 aaPredicted RBP30.89■■■□□ 2.53
SPHK1-207ENST00000590959 CEP162Q5TB80 1403 aa30.86■■■□□ 2.53
SPHK1-207ENST00000590959 CHD1O14646 1710 aa30.81■■■□□ 2.52
SPHK1-207ENST00000590959 GRIN2AQ12879 1464 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms