RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 NISCHQ9Y2I1 1504 aa41.18■■■■■ 4.18
SF3B2-209ENST00000530322 CCDC180Q9P1Z9 1646 aa36.67■■■■□ 3.46
SF3B2-209ENST00000530322 ABCC9O60706 1549 aa35.91■■■■□ 3.34
SF3B2-209ENST00000530322 RB1CC1Q8TDY2 1594 aa34.53■■■■□ 3.12
SF3B2-209ENST00000530322 NACADO15069 1562 aa34.47■■■■□ 3.11
SF3B2-209ENST00000530322 DCAF8L2P0C7V8 631 aa34.37■■■■□ 3.09
SF3B2-209ENST00000530322 ZCCHC6Q5VYS8 1495 aaKnown RBP34.29■■■■□ 3.08
SF3B2-209ENST00000530322 MYO15BQ96JP2 1530 aa34.26■■■■□ 3.08
SF3B2-209ENST00000530322 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
SF3B2-209ENST00000530322 UNC13AQ9UPW8 1703 aa33.81■■■■□ 3
SF3B2-209ENST00000530322 PABPN1Q86U42 306 aaKnown RBP eCLIP33.53■■■□□ 2.96
SF3B2-209ENST00000530322 BICRAQ9NZM4 1560 aa33.51■■■□□ 2.96
SF3B2-209ENST00000530322 SCRIBQ14160 1630 aa33.42■■■□□ 2.94
SF3B2-209ENST00000530322 SHROOM4Q9ULL8 1493 aa33.13■■■□□ 2.89
SF3B2-209ENST00000530322 DNAJC5BQ9UF47 199 aa33.05■■■□□ 2.88
SF3B2-209ENST00000530322 EIF4G1Q04637 1599 aaKnown RBP32.62■■■□□ 2.81
SF3B2-209ENST00000530322 CC2D2AQ9P2K1 1620 aa32.5■■■□□ 2.79
SF3B2-209ENST00000530322 CECR2Q9BXF3 1484 aa32.27■■■□□ 2.76
SF3B2-209ENST00000530322 SMARCA4P51532 1647 aa31.98■■■□□ 2.71
SF3B2-209ENST00000530322 BAZ1AQ9NRL2 1556 aaPredicted RBP31.92■■■□□ 2.7
SF3B2-209ENST00000530322 NCAPD3P42695 1498 aa31.81■■■□□ 2.68
SF3B2-209ENST00000530322 ATAD2BQ9ULI0 1458 aa31.81■■■□□ 2.68
SF3B2-209ENST00000530322 SMARCA2P51531 1590 aa31.77■■■□□ 2.68
SF3B2-209ENST00000530322 MROH2BQ7Z745 1585 aa31.75■■■□□ 2.67
SF3B2-209ENST00000530322 PEG3Q9GZU2 1588 aa31.68■■■□□ 2.66
SF3B2-209ENST00000530322 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
SF3B2-209ENST00000530322 BAZ1BQ9UIG0 1483 aaKnown RBP31.53■■■□□ 2.64
SF3B2-209ENST00000530322 WIZO95785 1651 aa31.41■■■□□ 2.62
SF3B2-209ENST00000530322 RSF1Q96T23 1441 aaPredicted RBP31.35■■■□□ 2.61
SF3B2-209ENST00000530322 NESP48681 1621 aa31.07■■■□□ 2.56
SF3B2-209ENST00000530322 TOP2AP11388 1531 aaKnown RBP31.05■■■□□ 2.56
SF3B2-209ENST00000530322 LAMC3Q9Y6N6 1575 aa30.99■■■□□ 2.55
SF3B2-209ENST00000530322 ERCC6Q03468 1493 aa30.94■■■□□ 2.54
SF3B2-209ENST00000530322 CADPSQ9ULU8 1353 aa30.87■■■□□ 2.53
SF3B2-209ENST00000530322 PDS5BQ9NTI5 1447 aa30.75■■■□□ 2.51
SF3B2-209ENST00000530322 KIF21AQ7Z4S6 1674 aa30.72■■■□□ 2.51
SF3B2-209ENST00000530322 CCDC88BA6NC98 1476 aa30.69■■■□□ 2.5
SF3B2-209ENST00000530322 CFTRP13569 1480 aa30.68■■■□□ 2.5
SF3B2-209ENST00000530322 CUX2O14529 1486 aa30.66■■■□□ 2.5
SF3B2-209ENST00000530322 THOC2Q8NI27 1593 aaKnown RBP30.63■■■□□ 2.49
SF3B2-209ENST00000530322 FANCD2Q9BXW9 1451 aa30.51■■■□□ 2.48
SF3B2-209ENST00000530322 PRDM2Q13029 1718 aa30.49■■■□□ 2.47
SF3B2-209ENST00000530322 CEP164Q9UPV0 1460 aa30.48■■■□□ 2.47
SF3B2-209ENST00000530322 SUPT5HO00267 1087 aaKnown RBP30.46■■■□□ 2.47
SF3B2-209ENST00000530322 MRC2Q9UBG0 1479 aa30.45■■■□□ 2.47
SF3B2-209ENST00000530322 WDR62O43379 1518 aa30.37■■■□□ 2.45
SF3B2-209ENST00000530322 URB2Q14146 1524 aaKnown RBP30.23■■■□□ 2.43
SF3B2-209ENST00000530322 TOPBP1Q92547 1522 aa30.03■■■□□ 2.4
SF3B2-209ENST00000530322 ABCC8Q09428 1581 aa30.01■■■□□ 2.39
SF3B2-209ENST00000530322 DNMBPQ6XZF7 1577 aa29.98■■■□□ 2.39
SF3B2-209ENST00000530322 IFT140Q96RY7 1462 aa29.85■■■□□ 2.37
SF3B2-209ENST00000530322 DNAJC5Q9H3Z4 198 aa29.8■■■□□ 2.36
SF3B2-209ENST00000530322 CUX1P39880 1505 aa29.79■■■□□ 2.36
SF3B2-209ENST00000530322 POLA1P09884 1462 aaPredicted RBP29.76■■■□□ 2.35
SF3B2-209ENST00000530322 ZNF608Q9ULD9 1512 aaPredicted RBP29.73■■■□□ 2.35
SF3B2-209ENST00000530322 TARBP1Q13395 1621 aaKnown RBP29.73■■■□□ 2.35
SF3B2-209ENST00000530322 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
SF3B2-209ENST00000530322 SOGA1O94964 1423 aa29.63■■■□□ 2.33
SF3B2-209ENST00000530322 RAD54L2Q9Y4B4 1467 aa29.63■■■□□ 2.33
SF3B2-209ENST00000530322 EIF4G3O43432 1585 aaKnown RBP29.62■■■□□ 2.33
SF3B2-209ENST00000530322 AQRO60306 1485 aaKnown RBP eCLIP29.55■■■□□ 2.322e-7■■■■□ 20
SF3B2-209ENST00000530322 WRNQ14191 1432 aaPredicted RBP eCLIP29.54■■■□□ 2.32
SF3B2-209ENST00000530322 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
SF3B2-209ENST00000530322 TOP2BQ02880 1626 aa29.52■■■□□ 2.32
SF3B2-209ENST00000530322 SYNJ1O43426 1573 aa29.5■■■□□ 2.31
SF3B2-209ENST00000530322 WDR97A6NE52 1622 aa29.48■■■□□ 2.31
SF3B2-209ENST00000530322 TDRD9Q8NDG6 1382 aaKnown RBP29.47■■■□□ 2.31
SF3B2-209ENST00000530322 ABCA10Q8WWZ4 1543 aa29.4■■■□□ 2.3
SF3B2-209ENST00000530322 OSCARQ8IYS5 282 aa29.36■■■□□ 2.29
SF3B2-209ENST00000530322 ABCA5Q8WWZ7 1642 aa29.31■■■□□ 2.28
SF3B2-209ENST00000530322 GRIN2BQ13224 1484 aa29.29■■■□□ 2.28
SF3B2-209ENST00000530322 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
SF3B2-209ENST00000530322 CHD1O14646 1710 aa29.28■■■□□ 2.28
SF3B2-209ENST00000530322 SNAPC4Q5SXM2 1469 aa29.27■■■□□ 2.28
SF3B2-209ENST00000530322 PBRM1Q86U86 1689 aa29.27■■■□□ 2.28
SF3B2-209ENST00000530322 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
SF3B2-209ENST00000530322 FBLN2P98095 1184 aa29.17■■■□□ 2.26
SF3B2-209ENST00000530322 SYNJ2O15056 1496 aa29.12■■■□□ 2.25
SF3B2-209ENST00000530322 CHMP7Q8WUX9 453 aaPredicted RBP29.08■■■□□ 2.25
SF3B2-209ENST00000530322 ERICH3Q5RHP9 1530 aa29.04■■■□□ 2.24
SF3B2-209ENST00000530322 ADAMTS12P58397 1594 aa29.02■■■□□ 2.24
SF3B2-209ENST00000530322 FHAD1B1AJZ9 1412 aa28.95■■■□□ 2.23
SF3B2-209ENST00000530322 CLASP1Q7Z460 1538 aa28.95■■■□□ 2.23
SF3B2-209ENST00000530322 RIMBP3CA6NJZ7 1639 aa28.94■■■□□ 2.22
SF3B2-209ENST00000530322 RIMBP3BA6NNM3 1639 aa28.94■■■□□ 2.22
SF3B2-209ENST00000530322 RIMBP3Q9UFD9 1639 aa28.94■■■□□ 2.22
SF3B2-209ENST00000530322 GRIN2AQ12879 1464 aa28.93■■■□□ 2.22
SF3B2-209ENST00000530322 KIF27Q86VH2 1401 aa28.92■■■□□ 2.22
SF3B2-209ENST00000530322 ARHGEF11O15085 1522 aa28.91■■■□□ 2.22
SF3B2-209ENST00000530322 IGF1RP08069 1367 aa28.84■■■□□ 2.21
SF3B2-209ENST00000530322 NUP160Q12769 1436 aa28.81■■■□□ 2.2
SF3B2-209ENST00000530322 CEP170Q5SW79 1584 aa28.8■■■□□ 2.2
SF3B2-209ENST00000530322 CUL7Q14999 1698 aa28.77■■■□□ 2.2
SF3B2-209ENST00000530322 TRIM41Q8WV44 630 aa28.76■■■□□ 2.19
SF3B2-209ENST00000530322 RUSC2Q8N2Y8 1516 aa28.68■■■□□ 2.18
SF3B2-209ENST00000530322 ARAP1Q96P48 1450 aa28.67■■■□□ 2.18
SF3B2-209ENST00000530322 CARMIL1Q5VZK9 1371 aa28.64■■■□□ 2.18
SF3B2-209ENST00000530322 SHROOM2Q13796 1616 aa28.62■■■□□ 2.17
SF3B2-209ENST00000530322 CYB5RLQ6IPT4 315 aa28.61■■■□□ 2.17
SF3B2-209ENST00000530322 ERCC6L2Q5T890 1561 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms