RNA–Protein interactions for RNA: ENST00000323374.8

SPHK1-201, Transcript of sphingosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene SPHK1, Length 2,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-201ENST00000323374 NISCHQ9Y2I1 1504 aa47.03■■■■■ 5.12
SPHK1-201ENST00000323374 CCDC180Q9P1Z9 1646 aa40.47■■■■■ 4.07
SPHK1-201ENST00000323374 ZCCHC6Q5VYS8 1495 aaKnown RBP39.67■■■■□ 3.94
SPHK1-201ENST00000323374 SHROOM4Q9ULL8 1493 aa39.19■■■■□ 3.86
SPHK1-201ENST00000323374 DCAF8L2P0C7V8 631 aa38.81■■■■□ 3.8
SPHK1-201ENST00000323374 DCAF1Q9Y4B6 1507 aa38.8■■■■□ 3.8
SPHK1-201ENST00000323374 SUPT5HO00267 1087 aaKnown RBP38.15■■■■□ 3.7
SPHK1-201ENST00000323374 MYO15BQ96JP2 1530 aa37.99■■■■□ 3.67
SPHK1-201ENST00000323374 ABCC9O60706 1549 aa37.72■■■■□ 3.63
SPHK1-201ENST00000323374 NACADO15069 1562 aa37.56■■■■□ 3.6
SPHK1-201ENST00000323374 SCRIBQ14160 1630 aa37.52■■■■□ 3.6
SPHK1-201ENST00000323374 RB1CC1Q8TDY2 1594 aa37.05■■■■□ 3.52
SPHK1-201ENST00000323374 CHIC1Q5VXU3 224 aa36.91■■■■□ 3.5
SPHK1-201ENST00000323374 RSF1Q96T23 1441 aaPredicted RBP36.88■■■■□ 3.49
SPHK1-201ENST00000323374 CECR2Q9BXF3 1484 aa36.55■■■■□ 3.44
SPHK1-201ENST00000323374 MROH2BQ7Z745 1585 aa36.41■■■■□ 3.42
SPHK1-201ENST00000323374 UNC13AQ9UPW8 1703 aa36.32■■■■□ 3.4
SPHK1-201ENST00000323374 BAZ1AQ9NRL2 1556 aaPredicted RBP36.22■■■■□ 3.39
SPHK1-201ENST00000323374 WIZO95785 1651 aa36.15■■■■□ 3.38
SPHK1-201ENST00000323374 SMARCA4P51532 1647 aa35.95■■■■□ 3.35
SPHK1-201ENST00000323374 BICRAQ9NZM4 1560 aa35.94■■■■□ 3.34
SPHK1-201ENST00000323374 PABPN1Q86U42 306 aaKnown RBP eCLIP35.84■■■■□ 3.333e-7■■■□□ 17.7
SPHK1-201ENST00000323374 TRIM41Q8WV44 630 aa35.75■■■■□ 3.31
SPHK1-201ENST00000323374 TOP2AP11388 1531 aaKnown RBP35.75■■■■□ 3.31
SPHK1-201ENST00000323374 LOC105371045A0A1W2PR82 267 aa35.61■■■■□ 3.29
SPHK1-201ENST00000323374 EIF4G1Q04637 1599 aaKnown RBP35.48■■■■□ 3.27
SPHK1-201ENST00000323374 CCDC88BA6NC98 1476 aa35.47■■■■□ 3.27
SPHK1-201ENST00000323374 SMARCA2P51531 1590 aa35.46■■■■□ 3.27
SPHK1-201ENST00000323374 PEG3Q9GZU2 1588 aa35.42■■■■□ 3.26
SPHK1-201ENST00000323374 FAM9AQ8IZU1 332 aaPredicted RBP35.21■■■■□ 3.23
SPHK1-201ENST00000323374 ATAD2BQ9ULI0 1458 aa35.18■■■■□ 3.22
SPHK1-201ENST00000323374 BAZ1BQ9UIG0 1483 aaKnown RBP35.04■■■■□ 3.2
SPHK1-201ENST00000323374 ABCC8Q09428 1581 aa35.03■■■■□ 3.2
SPHK1-201ENST00000323374 PCGF6Q9BYE7 350 aa34.91■■■■□ 3.18
SPHK1-201ENST00000323374 EHMT2Q96KQ7 1210 aa34.76■■■■□ 3.15
SPHK1-201ENST00000323374 NCAPD3P42695 1498 aa34.7■■■■□ 3.15
SPHK1-201ENST00000323374 HMGXB3Q12766 1538 aa34.68■■■■□ 3.14
SPHK1-201ENST00000323374 WRNQ14191 1432 aaPredicted RBP eCLIP34.68■■■■□ 3.14
SPHK1-201ENST00000323374 TRIM26Q12899 539 aaPredicted RBP34.61■■■■□ 3.13
SPHK1-201ENST00000323374 EEA1Q15075 1411 aa34.59■■■■□ 3.13
SPHK1-201ENST00000323374 SOGA1O94964 1423 aa34.58■■■■□ 3.13
SPHK1-201ENST00000323374 HRCP23327 699 aa34.55■■■■□ 3.12
SPHK1-201ENST00000323374 SYNJ1O43426 1573 aa34.48■■■■□ 3.11
SPHK1-201ENST00000323374 CSRNP3Q8WYN3 585 aa34.42■■■■□ 3.1
SPHK1-201ENST00000323374 RUSC2Q8N2Y8 1516 aa34.4■■■■□ 3.1
SPHK1-201ENST00000323374 TNIKQ9UKE5 1360 aa34.27■■■■□ 3.08
SPHK1-201ENST00000323374 TOP2BQ02880 1626 aa34.23■■■■□ 3.07
SPHK1-201ENST00000323374 CFTRP13569 1480 aa34.19■■■■□ 3.06
SPHK1-201ENST00000323374 GOLGA3Q08378 1498 aa34.19■■■■□ 3.06
SPHK1-201ENST00000323374 CEP162Q5TB80 1403 aa34.18■■■■□ 3.06
SPHK1-201ENST00000323374 BIVM-ERCC5R4GMW8 1640 aa34.15■■■■□ 3.06
SPHK1-201ENST00000323374 UBTFP17480 764 aaKnown RBP34.12■■■■□ 3.05
SPHK1-201ENST00000323374 CEP164Q9UPV0 1460 aa34.1■■■■□ 3.05
SPHK1-201ENST00000323374 CC2D2AQ9P2K1 1620 aa34.08■■■■□ 3.05
SPHK1-201ENST00000323374 KIF21BO75037 1637 aa34.07■■■■□ 3.05
SPHK1-201ENST00000323374 CUX1P39880 1505 aa33.98■■■■□ 3.03
SPHK1-201ENST00000323374 PRDM2Q13029 1718 aa33.94■■■■□ 3.02
SPHK1-201ENST00000323374 CADPSQ9ULU8 1353 aa33.93■■■■□ 3.02
SPHK1-201ENST00000323374 PPARGC1BQ86YN6 1023 aaKnown RBP33.91■■■■□ 3.02
SPHK1-201ENST00000323374 RAPGEF2Q9Y4G8 1499 aa33.82■■■■□ 3
SPHK1-201ENST00000323374 KIF27Q86VH2 1401 aa33.72■■■□□ 2.99
SPHK1-201ENST00000323374 CLIP1P30622 1438 aa33.71■■■□□ 2.99
SPHK1-201ENST00000323374 PRXQ9BXM0 1461 aa33.69■■■□□ 2.98
SPHK1-201ENST00000323374 ERICH3Q5RHP9 1530 aa33.69■■■□□ 2.98
SPHK1-201ENST00000323374 ZEB1P37275 1124 aaPredicted RBP33.66■■■□□ 2.98
SPHK1-201ENST00000323374 FANCD2Q9BXW9 1451 aa33.56■■■□□ 2.96
SPHK1-201ENST00000323374 VPS8Q8N3P4 1428 aa33.52■■■□□ 2.96
SPHK1-201ENST00000323374 TTBK1Q5TCY1 1321 aaPredicted RBP33.49■■■□□ 2.95
SPHK1-201ENST00000323374 FGD5Q6ZNL6 1462 aa33.48■■■□□ 2.95
SPHK1-201ENST00000323374 CUX2O14529 1486 aa33.46■■■□□ 2.95
SPHK1-201ENST00000323374 RANGAP1P46060 587 aaPredicted RBP33.4■■■□□ 2.94
SPHK1-201ENST00000323374 NESP48681 1621 aa33.39■■■□□ 2.94
SPHK1-201ENST00000323374 IGF1RP08069 1367 aa33.35■■■□□ 2.93
SPHK1-201ENST00000323374 DNMBPQ6XZF7 1577 aa33.35■■■□□ 2.93
SPHK1-201ENST00000323374 LAMC3Q9Y6N6 1575 aa33.34■■■□□ 2.93
SPHK1-201ENST00000323374 APLP2Q06481 763 aa33.31■■■□□ 2.92
SPHK1-201ENST00000323374 TOPBP1Q92547 1522 aa33.27■■■□□ 2.92
SPHK1-201ENST00000323374 ARAP1Q96P48 1450 aa33.25■■■□□ 2.91
SPHK1-201ENST00000323374 CARMIL1Q5VZK9 1371 aa33.21■■■□□ 2.91
SPHK1-201ENST00000323374 POLA1P09884 1462 aaPredicted RBP33.19■■■□□ 2.9
SPHK1-201ENST00000323374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.19■■■□□ 2.9
SPHK1-201ENST00000323374 ABCA10Q8WWZ4 1543 aa33.17■■■□□ 2.9
SPHK1-201ENST00000323374 CCER1Q8TC90 406 aaPredicted RBP33.15■■■□□ 2.9
SPHK1-201ENST00000323374 RAD54L2Q9Y4B4 1467 aa33.14■■■□□ 2.9
SPHK1-201ENST00000323374 PDS5BQ9NTI5 1447 aa33.13■■■□□ 2.89
SPHK1-201ENST00000323374 DNAJC5BQ9UF47 199 aa33.11■■■□□ 2.89
SPHK1-201ENST00000323374 ARHGAP35Q9NRY4 1499 aa33.08■■■□□ 2.89
SPHK1-201ENST00000323374 URB2Q14146 1524 aaKnown RBP33.08■■■□□ 2.89
SPHK1-201ENST00000323374 CUL7Q14999 1698 aa32.92■■■□□ 2.86
SPHK1-201ENST00000323374 WDR97A6NE52 1622 aa32.91■■■□□ 2.86
SPHK1-201ENST00000323374 KIF21AQ7Z4S6 1674 aa32.9■■■□□ 2.86
SPHK1-201ENST00000323374 HNRNPUL2Q1KMD3 747 aaKnown RBP32.86■■■□□ 2.85
SPHK1-201ENST00000323374 KANK4Q5T7N3 995 aaPredicted RBP32.84■■■□□ 2.85
SPHK1-201ENST00000323374 ABCA5Q8WWZ7 1642 aa32.79■■■□□ 2.84
SPHK1-201ENST00000323374 TDRD9Q8NDG6 1382 aaKnown RBP32.77■■■□□ 2.84
SPHK1-201ENST00000323374 GAPVD1Q14C86 1478 aa32.75■■■□□ 2.83
SPHK1-201ENST00000323374 FHAD1B1AJZ9 1412 aa32.71■■■□□ 2.83
SPHK1-201ENST00000323374 MAP3K1Q13233 1512 aa32.71■■■□□ 2.83
SPHK1-201ENST00000323374 CTTNBP2Q8WZ74 1663 aa32.67■■■□□ 2.82
SPHK1-201ENST00000323374 EFCAB5A4FU69 1503 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms