Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 FREM1-201ENST00000380875 6126 ntTSL 1 (best)11.16□□□□□ -0.623e-8■■■■□ 20.5
MATR3P43243 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.733e-8■■■■□ 20.5
MATR3P43243 FDFT1-203ENST00000446331 1558 ntTSL 225.65■■□□□ 1.72e-6■■■■□ 20.5
MATR3P43243 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.362e-6■■■■□ 20.5
MATR3P43243 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.28■■□□□ 1.162e-6■■■■□ 20.5
MATR3P43243 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.84■■□□□ 1.092e-6■■■■□ 20.5
MATR3P43243 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.3■■□□□ 12e-6■■■■□ 20.5
MATR3P43243 FDFT1-207ENST00000525607 1773 ntTSL 220.64■□□□□ 0.892e-6■■■■□ 20.5
MATR3P43243 FDFT1-217ENST00000530337 741 ntTSL 319.3■□□□□ 0.682e-6■■■■□ 20.5
MATR3P43243 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.362e-6■■■■□ 20.5
MATR3P43243 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.7■□□□□ 0.262e-6■■■■□ 20.5
MATR3P43243 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.092e-6■■■■□ 20.5
MATR3P43243 FDFT1-215ENST00000529464 932 ntTSL 1 (best)15.55■□□□□ 0.082e-6■■■■□ 20.5
MATR3P43243 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.05■□□□□ -02e-6■■■■□ 20.5
MATR3P43243 FDFT1-219ENST00000531249 768 ntTSL 214.94□□□□□ -0.022e-6■■■■□ 20.5
MATR3P43243 FDFT1-204ENST00000525283 898 ntTSL 313.84□□□□□ -0.192e-6■■■■□ 20.5
MATR3P43243 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC13.61□□□□□ -0.232e-6■■■■□ 20.5
MATR3P43243 FDFT1-225ENST00000622850 1987 ntTSL 2 BASIC11.89□□□□□ -0.512e-6■■■■□ 20.5
MATR3P43243 FDFT1-221ENST00000532266 583 ntTSL 59.44□□□□□ -0.92e-6■■■■□ 20.5
MATR3P43243 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.98□□□□□ -0.972e-6■■■■□ 20.5
MATR3P43243 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.57□□□□□ -1.22e-6■■■■□ 20.5
MATR3P43243 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.57□□□□□ -1.22e-6■■■■□ 20.5
MATR3P43243 KDM4C-213ENST00000496464 697 ntTSL 510.41□□□□□ -0.742e-6■■■■□ 20.5
MATR3P43243 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.06□□□□□ -1.762e-6■■■■□ 20.5
MATR3P43243 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.421e-6■■■■□ 20.5
MATR3P43243 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC14.7□□□□□ -0.061e-6■■■■□ 20.5
MATR3P43243 ALDH1A2-208ENST00000558239 664 ntTSL 413.07□□□□□ -0.321e-6■■■■□ 20.5
MATR3P43243 ALDH1A2-202ENST00000347587 3297 ntTSL 1 (best) BASIC11.9□□□□□ -0.51e-6■■■■□ 20.5
MATR3P43243 ALDH1A2-207ENST00000558231 1664 ntTSL 2 BASIC11.68□□□□□ -0.541e-6■■■■□ 20.5
MATR3P43243 ALDH1A2-203ENST00000430119 3049 ntTSL 211.24□□□□□ -0.611e-6■■■■□ 20.5
MATR3P43243 ALDH1A2-212ENST00000558595 484 ntTSL 310.66□□□□□ -0.71e-6■■■■□ 20.5
MATR3P43243 ALDH1A2-215ENST00000559266 545 ntTSL 410.66□□□□□ -0.71e-6■■■■□ 20.5
MATR3P43243 ALDH1A2-205ENST00000557967 577 ntTSL 410.66□□□□□ -0.71e-6■■■■□ 20.5
MATR3P43243 ALDH1A2-206ENST00000558073 581 ntTSL 49.34□□□□□ -0.911e-6■■■■□ 20.5
MATR3P43243 ALDH1A2-220ENST00000560122 562 ntTSL 59.23□□□□□ -0.931e-6■■■■□ 20.5
MATR3P43243 ALDH1A2-216ENST00000559297 542 ntTSL 47.34□□□□□ -1.231e-6■■■■□ 20.5
MATR3P43243 RB1CC1-208ENST00000521611 528 ntTSL 524.59■■□□□ 1.538e-7■■■■□ 20.5
MATR3P43243 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.598e-7■■■■□ 20.5
MATR3P43243 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.518e-7■■■■□ 20.5
MATR3P43243 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.14■■□□□ 1.297e-7■■■■□ 20.5
MATR3P43243 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.17e-7■■■■□ 20.5
MATR3P43243 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.75■□□□□ 0.437e-7■■■■□ 20.5
MATR3P43243 CAMKMT-206ENST00000428993 526 ntTSL 37.09□□□□□ -1.277e-7■■■■□ 20.5
MATR3P43243 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.591e-6■■■■□ 20.5
MATR3P43243 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.733e-7■■■■□ 20.5
MATR3P43243 PIP5K1B-205ENST00000472907 731 ntTSL 311.98□□□□□ -0.492e-6■■■■□ 20.5
MATR3P43243 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.58■□□□□ 0.084e-7■■■■□ 20.5
MATR3P43243 C22orf34-205ENST00000416411 542 ntTSL 415.12■□□□□ 0.014e-7■■■■□ 20.5
MATR3P43243 KDM1A-205ENST00000494920 905 ntTSL 311.99□□□□□ -0.495e-7■■■■□ 20.5
MATR3P43243 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.289e-9■■■■□ 20.5
MATR3P43243 MACROD1-208ENST00000545464 899 ntTSL 326.75■■□□□ 1.879e-9■■■■□ 20.5
MATR3P43243 USP53-203ENST00000507597 503 ntTSL 322.01■■□□□ 1.119e-7■■■■□ 20.5
MATR3P43243 MACROD1-206ENST00000542359 459 ntTSL 316.92■□□□□ 0.39e-9■■■■□ 20.5
MATR3P43243 MACROD1-207ENST00000543422 403 ntTSL 315.86■□□□□ 0.139e-9■■■■□ 20.5
MATR3P43243 USP53-201ENST00000274030 5936 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.269e-7■■■■□ 20.5
MATR3P43243 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC11.27□□□□□ -0.612e-7■■■■□ 20.5
MATR3P43243 RAPGEF5-206ENST00000458533 869 ntTSL 59.92□□□□□ -0.822e-7■■■■□ 20.5
MATR3P43243 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC9.62□□□□□ -0.872e-7■■■■□ 20.5
MATR3P43243 RAPGEF5-205ENST00000451559 836 ntTSL 59.04□□□□□ -0.962e-7■■■■□ 20.5
MATR3P43243 USP53-206ENST00000510737 534 ntTSL 56.07□□□□□ -1.449e-7■■■■□ 20.5
MATR3P43243 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)13.47□□□□□ -0.259e-7■■■■□ 20.5
MATR3P43243 HBG2-202ENST00000380252 694 ntTSL 3 BASIC11.55□□□□□ -0.569e-7■■■■□ 20.5
MATR3P43243 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.599e-7■■■■□ 20.5
MATR3P43243 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.779e-7■■■■□ 20.5
MATR3P43243 AC087380.1-201ENST00000420465 1001 ntTSL 38.09□□□□□ -1.119e-7■■■■□ 20.5
MATR3P43243 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.68□□□□□ -1.349e-7■■■■□ 20.5
MATR3P43243 AC087380.1-203ENST00000420726 752 ntTSL 56.59□□□□□ -1.359e-7■■■■□ 20.5
MATR3P43243 HBE1-203ENST00000396895 578 ntTSL 55.99□□□□□ -1.459e-7■■■■□ 20.5
MATR3P43243 NUBPL-207ENST00000550355 596 ntTSL 420.74■□□□□ 0.913e-6■■■■□ 20.5
MATR3P43243 NUBPL-211ENST00000552489 541 ntTSL 418.98■□□□□ 0.633e-6■■■■□ 20.5
MATR3P43243 C3-214ENST00000600763 406 ntTSL 316.98■□□□□ 0.312e-6■■■■□ 20.4
MATR3P43243 GCFC2-208ENST00000472230 2265 ntTSL 219.89■□□□□ 0.778e-9■■■■□ 20.4
MATR3P43243 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.32■□□□□ 0.528e-9■■■■□ 20.4
MATR3P43243 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.48e-9■■■■□ 20.4
MATR3P43243 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.49■□□□□ 0.238e-9■■■■□ 20.4
MATR3P43243 GCFC2-205ENST00000470197 3648 ntTSL 1 (best)4.66□□□□□ -1.668e-9■■■■□ 20.4
MATR3P43243 GCFC2-203ENST00000427862 632 ntTSL 34.48□□□□□ -1.698e-9■■■■□ 20.4
MATR3P43243 G2E3-210ENST00000552488 786 ntTSL 312.78□□□□□ -0.363e-7■■■■□ 20.4
MATR3P43243 G2E3-209ENST00000550944 565 ntTSL 22.05□□□□□ -2.083e-7■■■■□ 20.4
MATR3P43243 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.273e-6■■■■□ 20.4
MATR3P43243 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.053e-6■■■■□ 20.4
MATR3P43243 ORC4-211ENST00000490200 563 ntTSL 420.94■□□□□ 0.941e-6■■■■□ 20.4
MATR3P43243 ORC4-204ENST00000440042 552 ntTSL 320.44■□□□□ 0.861e-6■■■■□ 20.4
MATR3P43243 ORC4-206ENST00000461711 528 ntTSL 418.72■□□□□ 0.591e-6■■■■□ 20.4
MATR3P43243 ORC4-205ENST00000457954 647 ntTSL 412.5□□□□□ -0.411e-6■■■■□ 20.4
MATR3P43243 ORC4-212ENST00000495601 611 ntTSL 211.55□□□□□ -0.561e-6■■■■□ 20.4
MATR3P43243 ORC4-203ENST00000416719 571 ntTSL 33.06□□□□□ -1.921e-6■■■■□ 20.4
MATR3P43243 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.061e-6■■■■□ 20.4
MATR3P43243 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 11e-6■■■■□ 20.4
MATR3P43243 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.925e-7■■■■□ 20.4
MATR3P43243 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.955e-7■■■■□ 20.4
MATR3P43243 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.645e-7■■■■□ 20.4
MATR3P43243 SMYD3-216ENST00000492487 634 ntTSL 39.1□□□□□ -0.951e-6■■■■□ 20.4
MATR3P43243 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.66□□□□□ -1.182e-6■■■■□ 20.4
MATR3P43243 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.222e-6■■■■□ 20.4
MATR3P43243 AGO1-203ENST00000635259 2836 ntTSL 513.88□□□□□ -0.195e-6■■■■□ 20.4
MATR3P43243 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC8.28□□□□□ -1.081e-6■■■■□ 20.4
MATR3P43243 SUMF1-204ENST00000448413 3150 ntTSL 216.08■□□□□ 0.163e-6■■■■□ 20.4
MATR3P43243 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.68■□□□□ 0.741e-6■■■■□ 20.4
MATR3P43243 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.51e-6■■■■□ 20.4
Retrieved 100 of 16,209 protein–RNA pairs in 129 ms