RNA–Protein interactions for RNA: ENST00000496464.1

KDM4C-213, Transcript of lysine demethylase 4C, humanhuman

TSL 5

Gene KDM4C, Length 697 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-213ENST00000496464 NISCHQ9Y2I1 1504 aa24.65■■□□□ 1.54
KDM4C-213ENST00000496464 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
KDM4C-213ENST00000496464 ABCC9O60706 1549 aa22.47■■□□□ 1.19
KDM4C-213ENST00000496464 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
KDM4C-213ENST00000496464 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
KDM4C-213ENST00000496464 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
KDM4C-213ENST00000496464 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
KDM4C-213ENST00000496464 NACADO15069 1562 aa21.11■□□□□ 0.97
KDM4C-213ENST00000496464 UNC13AQ9UPW8 1703 aa20.92■□□□□ 0.94
KDM4C-213ENST00000496464 PABPN1Q86U42 306 aaKnown RBP eCLIP20.81■□□□□ 0.92
KDM4C-213ENST00000496464 DCAF8L2P0C7V8 631 aa20.78■□□□□ 0.92
KDM4C-213ENST00000496464 MYO15BQ96JP2 1530 aa20.74■□□□□ 0.91
KDM4C-213ENST00000496464 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
KDM4C-213ENST00000496464 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
KDM4C-213ENST00000496464 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
KDM4C-213ENST00000496464 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
KDM4C-213ENST00000496464 CC2D2AQ9P2K1 1620 aa20.34■□□□□ 0.85
KDM4C-213ENST00000496464 CECR2Q9BXF3 1484 aa20.28■□□□□ 0.84
KDM4C-213ENST00000496464 SCRIBQ14160 1630 aa20.25■□□□□ 0.83
KDM4C-213ENST00000496464 EIF4G1Q04637 1599 aaKnown RBP20.22■□□□□ 0.83
KDM4C-213ENST00000496464 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
KDM4C-213ENST00000496464 CUX2O14529 1486 aa19.52■□□□□ 0.72
KDM4C-213ENST00000496464 NCAPD3P42695 1498 aa19.46■□□□□ 0.71
KDM4C-213ENST00000496464 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
KDM4C-213ENST00000496464 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
KDM4C-213ENST00000496464 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
KDM4C-213ENST00000496464 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
KDM4C-213ENST00000496464 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
KDM4C-213ENST00000496464 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
KDM4C-213ENST00000496464 NESP48681 1621 aa19.23■□□□□ 0.67
KDM4C-213ENST00000496464 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
KDM4C-213ENST00000496464 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
KDM4C-213ENST00000496464 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
KDM4C-213ENST00000496464 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
KDM4C-213ENST00000496464 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
KDM4C-213ENST00000496464 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
KDM4C-213ENST00000496464 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
KDM4C-213ENST00000496464 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
KDM4C-213ENST00000496464 PDS5BQ9NTI5 1447 aa18.95■□□□□ 0.62
KDM4C-213ENST00000496464 CADPSQ9ULU8 1353 aa18.83■□□□□ 0.61
KDM4C-213ENST00000496464 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.6
KDM4C-213ENST00000496464 WDR62O43379 1518 aa18.82■□□□□ 0.6
KDM4C-213ENST00000496464 WIZO95785 1651 aa18.76■□□□□ 0.59
KDM4C-213ENST00000496464 TRIM41Q8WV44 630 aa18.73■□□□□ 0.59
KDM4C-213ENST00000496464 CEP164Q9UPV0 1460 aa18.7■□□□□ 0.58
KDM4C-213ENST00000496464 FANCD2Q9BXW9 1451 aa18.64■□□□□ 0.57
KDM4C-213ENST00000496464 CFTRP13569 1480 aa18.58■□□□□ 0.57
KDM4C-213ENST00000496464 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
KDM4C-213ENST00000496464 URB2Q14146 1524 aaKnown RBP18.51■□□□□ 0.55
KDM4C-213ENST00000496464 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
KDM4C-213ENST00000496464 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
KDM4C-213ENST00000496464 RSF1Q96T23 1441 aaPredicted RBP18.47■□□□□ 0.55
KDM4C-213ENST00000496464 RIMBP3CA6NJZ7 1639 aa18.38■□□□□ 0.53
KDM4C-213ENST00000496464 RIMBP3BA6NNM3 1639 aa18.38■□□□□ 0.53
KDM4C-213ENST00000496464 RIMBP3Q9UFD9 1639 aa18.38■□□□□ 0.53
KDM4C-213ENST00000496464 IFT140Q96RY7 1462 aa18.33■□□□□ 0.52
KDM4C-213ENST00000496464 ZNF608Q9ULD9 1512 aaPredicted RBP18.32■□□□□ 0.52
KDM4C-213ENST00000496464 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
KDM4C-213ENST00000496464 TOPBP1Q92547 1522 aa18.27■□□□□ 0.51
KDM4C-213ENST00000496464 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
KDM4C-213ENST00000496464 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
KDM4C-213ENST00000496464 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
KDM4C-213ENST00000496464 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
KDM4C-213ENST00000496464 CHD1O14646 1710 aa18.19■□□□□ 0.5
KDM4C-213ENST00000496464 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
KDM4C-213ENST00000496464 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.49
KDM4C-213ENST00000496464 ARAP1Q96P48 1450 aa18.08■□□□□ 0.49
KDM4C-213ENST00000496464 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
KDM4C-213ENST00000496464 CYB5RLQ6IPT4 315 aa18.06■□□□□ 0.48
KDM4C-213ENST00000496464 WDR97A6NE52 1622 aa17.99■□□□□ 0.47
KDM4C-213ENST00000496464 RAD54L2Q9Y4B4 1467 aa17.97■□□□□ 0.47
KDM4C-213ENST00000496464 FBLN2P98095 1184 aa17.96■□□□□ 0.47
KDM4C-213ENST00000496464 CLASP1Q7Z460 1538 aa17.95■□□□□ 0.46
KDM4C-213ENST00000496464 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
KDM4C-213ENST00000496464 SNAPC4Q5SXM2 1469 aa17.94■□□□□ 0.46
KDM4C-213ENST00000496464 SOGA1O94964 1423 aa17.93■□□□□ 0.46
KDM4C-213ENST00000496464 FOXD1Q16676 465 aa17.93■□□□□ 0.46
KDM4C-213ENST00000496464 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
KDM4C-213ENST00000496464 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
KDM4C-213ENST00000496464 FGD5Q6ZNL6 1462 aa17.9■□□□□ 0.46
KDM4C-213ENST00000496464 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
KDM4C-213ENST00000496464 CUX1P39880 1505 aa17.86■□□□□ 0.45
KDM4C-213ENST00000496464 GRIN2BQ13224 1484 aa17.84■□□□□ 0.45
KDM4C-213ENST00000496464 PBRM1Q86U86 1689 aa17.83■□□□□ 0.45
KDM4C-213ENST00000496464 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
KDM4C-213ENST00000496464 CHMP7Q8WUX9 453 aaPredicted RBP17.81■□□□□ 0.44
KDM4C-213ENST00000496464 ABCA5Q8WWZ7 1642 aa17.74■□□□□ 0.43
KDM4C-213ENST00000496464 GAPVD1Q14C86 1478 aa17.74■□□□□ 0.43
KDM4C-213ENST00000496464 ABCA10Q8WWZ4 1543 aa17.71■□□□□ 0.43
KDM4C-213ENST00000496464 ADAMTS12P58397 1594 aa17.62■□□□□ 0.41
KDM4C-213ENST00000496464 ERCC6L2Q5T890 1561 aa17.62■□□□□ 0.41
KDM4C-213ENST00000496464 GRIN2AQ12879 1464 aa17.62■□□□□ 0.41
KDM4C-213ENST00000496464 CEP170Q5SW79 1584 aa17.59■□□□□ 0.41
KDM4C-213ENST00000496464 NUP160Q12769 1436 aa17.58■□□□□ 0.41
KDM4C-213ENST00000496464 SHROOM2Q13796 1616 aa17.58■□□□□ 0.4
KDM4C-213ENST00000496464 BIVM-ERCC5R4GMW8 1640 aa17.55■□□□□ 0.4
KDM4C-213ENST00000496464 WRNQ14191 1432 aaPredicted RBP eCLIP17.53■□□□□ 0.4
KDM4C-213ENST00000496464 TOP2BQ02880 1626 aa17.52■□□□□ 0.4
KDM4C-213ENST00000496464 KIF13AQ9H1H9 1805 aa17.51■□□□□ 0.39
KDM4C-213ENST00000496464 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms