RNA–Protein interactions for RNA: ENST00000435644.6

RB1CC1-202, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-202ENST00000435644 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
RB1CC1-202ENST00000435644 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
RB1CC1-202ENST00000435644 EHMT2Q96KQ7 1210 aa25.6■■□□□ 1.69
RB1CC1-202ENST00000435644 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
RB1CC1-202ENST00000435644 NISCHQ9Y2I1 1504 aa25.15■■□□□ 1.62
RB1CC1-202ENST00000435644 APLP2Q06481 763 aa24.9■■□□□ 1.58
RB1CC1-202ENST00000435644 FAM9AQ8IZU1 332 aaPredicted RBP24.85■■□□□ 1.57
RB1CC1-202ENST00000435644 TTBK1Q5TCY1 1321 aaPredicted RBP24.64■■□□□ 1.53
RB1CC1-202ENST00000435644 RANGAP1P46060 587 aaPredicted RBP24.55■■□□□ 1.52
RB1CC1-202ENST00000435644 PELP1Q8IZL8 1130 aaKnown RBP24.44■■□□□ 1.5
RB1CC1-202ENST00000435644 ATP1B4Q9UN42 357 aaPredicted RBP24.41■■□□□ 1.5
RB1CC1-202ENST00000435644 PCGF6Q9BYE7 350 aa23.98■■□□□ 1.43
RB1CC1-202ENST00000435644 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
RB1CC1-202ENST00000435644 UBTFP17480 764 aaKnown RBP23.84■■□□□ 1.41
RB1CC1-202ENST00000435644 MYT1LQ9UL68 1186 aa23.76■■□□□ 1.39
RB1CC1-202ENST00000435644 CCER1Q8TC90 406 aaPredicted RBP23.66■■□□□ 1.38
RB1CC1-202ENST00000435644 ERICH6Q7L0X2 663 aa23.64■■□□□ 1.37
RB1CC1-202ENST00000435644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.55■■□□□ 1.36
RB1CC1-202ENST00000435644 HNRNPUL2Q1KMD3 747 aaKnown RBP23.55■■□□□ 1.36
RB1CC1-202ENST00000435644 MYT1Q01538 1121 aa23.53■■□□□ 1.36
RB1CC1-202ENST00000435644 ZEB1P37275 1124 aaPredicted RBP23.52■■□□□ 1.36
RB1CC1-202ENST00000435644 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
RB1CC1-202ENST00000435644 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.33
RB1CC1-202ENST00000435644 CENPBP07199 599 aaPredicted RBP23.38■■□□□ 1.33
RB1CC1-202ENST00000435644 POLR3GLQ9BT43 218 aa23.29■■□□□ 1.32
RB1CC1-202ENST00000435644 ITGAEP38570 1179 aa23.26■■□□□ 1.31
RB1CC1-202ENST00000435644 YTHDC1Q96MU7 727 aaKnown RBP23.25■■□□□ 1.31
RB1CC1-202ENST00000435644 NEFLP07196 543 aa23.22■■□□□ 1.31
RB1CC1-202ENST00000435644 SLC4A1APQ9BWU0 796 aaKnown RBP23.08■■□□□ 1.29
RB1CC1-202ENST00000435644 CNGB1Q14028 1251 aaPredicted RBP23.08■■□□□ 1.29
RB1CC1-202ENST00000435644 HRCP23327 699 aa22.97■■□□□ 1.27
RB1CC1-202ENST00000435644 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
RB1CC1-202ENST00000435644 DAXXQ9UER7 740 aaPredicted RBP22.77■■□□□ 1.24
RB1CC1-202ENST00000435644 TRIM26Q12899 539 aaPredicted RBP22.71■■□□□ 1.23
RB1CC1-202ENST00000435644 FBLN2P98095 1184 aa22.66■■□□□ 1.22
RB1CC1-202ENST00000435644 ABCC9O60706 1549 aa22.6■■□□□ 1.21
RB1CC1-202ENST00000435644 FAM50AQ14320 339 aaKnown RBP22.59■■□□□ 1.21
RB1CC1-202ENST00000435644 LOC105371045A0A1W2PR82 267 aa22.55■■□□□ 1.2
RB1CC1-202ENST00000435644 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
RB1CC1-202ENST00000435644 BCANQ96GW7 911 aa22.46■■□□□ 1.19
RB1CC1-202ENST00000435644 CLSPNQ9HAW4 1339 aa22.4■■□□□ 1.18
RB1CC1-202ENST00000435644 SLC24A1O60721 1099 aa22.4■■□□□ 1.18
RB1CC1-202ENST00000435644 ZNF326Q5BKZ1 582 aaKnown RBP22.36■■□□□ 1.17
RB1CC1-202ENST00000435644 NEUROD1Q13562 356 aa22.32■■□□□ 1.16
RB1CC1-202ENST00000435644 ARID3CA6NKF2 412 aa22.29■■□□□ 1.16
RB1CC1-202ENST00000435644 PLPPR3Q6T4P5 718 aa22.26■■□□□ 1.15
RB1CC1-202ENST00000435644 ZNF316A6NFI3 1004 aaPredicted RBP22.22■■□□□ 1.15
RB1CC1-202ENST00000435644 BCL11AQ9H165 835 aa22.19■■□□□ 1.14
RB1CC1-202ENST00000435644 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
RB1CC1-202ENST00000435644 ZBTB47Q9UFB7 747 aaPredicted RBP22.1■■□□□ 1.13
RB1CC1-202ENST00000435644 ESF1Q9H501 851 aaKnown RBP22.09■■□□□ 1.13
RB1CC1-202ENST00000435644 ZNF777Q9ULD5 760 aaPredicted RBP22.06■■□□□ 1.12
RB1CC1-202ENST00000435644 NEFMP07197 916 aa21.96■■□□□ 1.11
RB1CC1-202ENST00000435644 CANXP27824 592 aaKnown RBP21.95■■□□□ 1.1
RB1CC1-202ENST00000435644 DIEXFQ68CQ4 756 aaKnown RBP21.94■■□□□ 1.1
RB1CC1-202ENST00000435644 STAG3Q9UJ98 1225 aa21.93■■□□□ 1.1
RB1CC1-202ENST00000435644 CHGAP10645 457 aaKnown RBP21.89■■□□□ 1.09
RB1CC1-202ENST00000435644 RTL5Q5HYW3 569 aaPredicted RBP21.89■■□□□ 1.09
RB1CC1-202ENST00000435644 NPM1P06748 294 aaKnown RBP eCLIP21.85■■□□□ 1.09
RB1CC1-202ENST00000435644 ANP32CO43423 234 aa21.84■■□□□ 1.09
RB1CC1-202ENST00000435644 CDK11AQ9UQ88 783 aaPredicted RBP21.73■■□□□ 1.07
RB1CC1-202ENST00000435644 GTF3C3Q9Y5Q9 886 aa21.71■■□□□ 1.07
RB1CC1-202ENST00000435644 SCAF1Q9H7N4 1312 aaKnown RBP21.69■■□□□ 1.06
RB1CC1-202ENST00000435644 ACIN1Q9UKV3 1341 aaKnown RBP21.62■■□□□ 1.05
RB1CC1-202ENST00000435644 A0A0G2JS52 829 aa21.6■■□□□ 1.05
RB1CC1-202ENST00000435644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.59■■□□□ 1.055e-7■■□□□ 12
RB1CC1-202ENST00000435644 PLEKHG5O94827 1062 aa21.54■■□□□ 1.04
RB1CC1-202ENST00000435644 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
RB1CC1-202ENST00000435644 CSRNP3Q8WYN3 585 aa21.5■■□□□ 1.03
RB1CC1-202ENST00000435644 ZBTB7CA1YPR0 619 aa21.47■■□□□ 1.03
RB1CC1-202ENST00000435644 SCRIBQ14160 1630 aa21.46■■□□□ 1.03
RB1CC1-202ENST00000435644 CHIC2Q9UKJ5 165 aa21.41■■□□□ 1.02
RB1CC1-202ENST00000435644 CHMP7Q8WUX9 453 aaPredicted RBP21.4■■□□□ 1.02
RB1CC1-202ENST00000435644 C14orf37Q86TY3 774 aa21.35■■□□□ 1.01
RB1CC1-202ENST00000435644 NPM2Q86SE8 214 aaKnown RBP21.34■■□□□ 1.01
RB1CC1-202ENST00000435644 SALL2Q9Y467 1007 aaPredicted RBP21.33■■□□□ 1.01
RB1CC1-202ENST00000435644 DCAF1Q9Y4B6 1507 aa21.33■■□□□ 1.01
RB1CC1-202ENST00000435644 TONSLQ96HA7 1378 aa21.31■■□□□ 1
RB1CC1-202ENST00000435644 KDM2AQ9Y2K7 1162 aa21.29■■□□□ 1
RB1CC1-202ENST00000435644 KCNH8Q96L42 1107 aa21.29■■□□□ 1
RB1CC1-202ENST00000435644 ARID4BQ4LE39 1312 aaPredicted RBP21.28■■□□□ 1
RB1CC1-202ENST00000435644 PPP1R15AO75807 674 aaPredicted RBP21.26■□□□□ 0.99
RB1CC1-202ENST00000435644 HSP90AA1P07900 732 aaKnown RBP21.25■□□□□ 0.99
RB1CC1-202ENST00000435644 TSPY4P0CV99 314 aa21.24■□□□□ 0.99
RB1CC1-202ENST00000435644 TSPY10P0CW01 314 aa21.24■□□□□ 0.99
RB1CC1-202ENST00000435644 HAP1P54257 671 aaPredicted RBP21.23■□□□□ 0.99
RB1CC1-202ENST00000435644 FAM9BQ8IZU0 186 aa21.21■□□□□ 0.99
RB1CC1-202ENST00000435644 ANP32AP39687 249 aaKnown RBP21.18■□□□□ 0.98
RB1CC1-202ENST00000435644 WDR43Q15061 677 aaKnown RBP eCLIP21.14■□□□□ 0.97
RB1CC1-202ENST00000435644 ARXQ96QS3 562 aa21.08■□□□□ 0.97
RB1CC1-202ENST00000435644 UPF2Q9HAU5 1272 aaKnown RBP21.08■□□□□ 0.96
RB1CC1-202ENST00000435644 HNRNPUQ00839 825 aaKnown RBP eCLIP21.07■□□□□ 0.96
RB1CC1-202ENST00000435644 MTUS2Q5JR59 1369 aa21.07■□□□□ 0.96
RB1CC1-202ENST00000435644 TMC1Q8TDI8 760 aa21.07■□□□□ 0.96
RB1CC1-202ENST00000435644 DDX10Q13206 875 aaKnown RBP21.06■□□□□ 0.96
RB1CC1-202ENST00000435644 ANP32BQ92688 251 aaKnown RBP21.03■□□□□ 0.96
RB1CC1-202ENST00000435644 TRHP20396 242 aaPredicted RBP21.01■□□□□ 0.95
RB1CC1-202ENST00000435644 RRP7BPQ9NSQ0 103 aa20.99■□□□□ 0.95
RB1CC1-202ENST00000435644 FKBP8Q14318 412 aa20.97■□□□□ 0.95
RB1CC1-202ENST00000435644 LMOD2Q6P5Q4 547 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms