RNA–Protein interactions for RNA: ENST00000630181.2

SMYD3-218, Transcript of SET and MYND domain containing 3, humanhuman

TSL 2 BASIC

Gene SMYD3, Length 1,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-218ENST00000630181 CHIC1Q5VXU3 224 aa20.18■□□□□ 0.82
SMYD3-218ENST00000630181 AEBP2Q6ZN18 517 aaPredicted RBP19.61■□□□□ 0.73
SMYD3-218ENST00000630181 NISCHQ9Y2I1 1504 aa19.4■□□□□ 0.7
SMYD3-218ENST00000630181 PHF23Q9BUL5 403 aaPredicted RBP17.88■□□□□ 0.45
SMYD3-218ENST00000630181 CCDC180Q9P1Z9 1646 aa17.53■□□□□ 0.4
SMYD3-218ENST00000630181 ABCC9O60706 1549 aa17.45■□□□□ 0.38
SMYD3-218ENST00000630181 PLPPR3Q6T4P5 718 aa16.84■□□□□ 0.29
SMYD3-218ENST00000630181 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
SMYD3-218ENST00000630181 NACADO15069 1562 aa16.56■□□□□ 0.24
SMYD3-218ENST00000630181 SENP3Q9H4L4 574 aaPredicted RBP16.43■□□□□ 0.22
SMYD3-218ENST00000630181 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
SMYD3-218ENST00000630181 MYO15BQ96JP2 1530 aa16.38■□□□□ 0.21
SMYD3-218ENST00000630181 UNC13AQ9UPW8 1703 aa16.27■□□□□ 0.19
SMYD3-218ENST00000630181 DCAF8L2P0C7V8 631 aa16.22■□□□□ 0.19
SMYD3-218ENST00000630181 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMYD3-218ENST00000630181 BICRAQ9NZM4 1560 aa16.16■□□□□ 0.18
SMYD3-218ENST00000630181 DCAF1Q9Y4B6 1507 aa16.1■□□□□ 0.17
SMYD3-218ENST00000630181 SHROOM4Q9ULL8 1493 aa16.08■□□□□ 0.16
SMYD3-218ENST00000630181 ZCCHC6Q5VYS8 1495 aaKnown RBP16.07■□□□□ 0.16
SMYD3-218ENST00000630181 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
SMYD3-218ENST00000630181 KCNA4P22459 653 aa15.85■□□□□ 0.13
SMYD3-218ENST00000630181 SLC24A1O60721 1099 aa15.84■□□□□ 0.13
SMYD3-218ENST00000630181 SCRIBQ14160 1630 aa15.83■□□□□ 0.12
SMYD3-218ENST00000630181 CC2D2AQ9P2K1 1620 aa15.81■□□□□ 0.12
SMYD3-218ENST00000630181 EIF4G1Q04637 1599 aaKnown RBP15.78■□□□□ 0.12
SMYD3-218ENST00000630181 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.12
SMYD3-218ENST00000630181 ADRA2BP18089 450 aa15.76■□□□□ 0.11
SMYD3-218ENST00000630181 PPP6R1Q9UPN7 881 aa15.43■□□□□ 0.06
SMYD3-218ENST00000630181 CSRNP3Q8WYN3 585 aa15.41■□□□□ 0.06
SMYD3-218ENST00000630181 SLC4A1APQ9BWU0 796 aaKnown RBP15.27■□□□□ 0.04
SMYD3-218ENST00000630181 NCAPD3P42695 1498 aa15.27■□□□□ 0.04
SMYD3-218ENST00000630181 DNAJC5Q9H3Z4 198 aa15.2■□□□□ 0.02
SMYD3-218ENST00000630181 CUX2O14529 1486 aa15.2■□□□□ 0.02
SMYD3-218ENST00000630181 HMGXB3Q12766 1538 aa15.18■□□□□ 0.02
SMYD3-218ENST00000630181 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
SMYD3-218ENST00000630181 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
SMYD3-218ENST00000630181 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
SMYD3-218ENST00000630181 FOXD1Q16676 465 aa15.14■□□□□ 0.01
SMYD3-218ENST00000630181 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
SMYD3-218ENST00000630181 BAZ1AQ9NRL2 1556 aaPredicted RBP15.09■□□□□ 0.01
SMYD3-218ENST00000630181 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
SMYD3-218ENST00000630181 BAZ1BQ9UIG0 1483 aaKnown RBP15.03■□□□□ -0
SMYD3-218ENST00000630181 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
SMYD3-218ENST00000630181 LAMC3Q9Y6N6 1575 aa14.96□□□□□ -0.01
SMYD3-218ENST00000630181 NESP48681 1621 aa14.95□□□□□ -0.02
SMYD3-218ENST00000630181 THOC2Q8NI27 1593 aaKnown RBP14.91□□□□□ -0.02
SMYD3-218ENST00000630181 MROH2BQ7Z745 1585 aa14.9□□□□□ -0.02
SMYD3-218ENST00000630181 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
SMYD3-218ENST00000630181 PDS5BQ9NTI5 1447 aa14.85□□□□□ -0.03
SMYD3-218ENST00000630181 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
SMYD3-218ENST00000630181 CADPSQ9ULU8 1353 aa14.77□□□□□ -0.04
SMYD3-218ENST00000630181 MRC2Q9UBG0 1479 aa14.71□□□□□ -0.05
SMYD3-218ENST00000630181 WDR62O43379 1518 aa14.71□□□□□ -0.06
SMYD3-218ENST00000630181 WIZO95785 1651 aa14.7□□□□□ -0.06
SMYD3-218ENST00000630181 NPM3O75607 178 aaKnown RBP14.69□□□□□ -0.06
SMYD3-218ENST00000630181 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
SMYD3-218ENST00000630181 ZBTB22O15209 634 aa14.63□□□□□ -0.07
SMYD3-218ENST00000630181 CFTRP13569 1480 aa14.61□□□□□ -0.07
SMYD3-218ENST00000630181 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
SMYD3-218ENST00000630181 TOP2AP11388 1531 aaKnown RBP14.58□□□□□ -0.08
SMYD3-218ENST00000630181 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
SMYD3-218ENST00000630181 AMER1Q5JTC6 1135 aaPredicted RBP14.52□□□□□ -0.08
SMYD3-218ENST00000630181 PIAS4Q8N2W9 510 aaPredicted RBP14.51□□□□□ -0.09
SMYD3-218ENST00000630181 RTN4Q9NQC3 1192 aaKnown RBP14.5□□□□□ -0.09
SMYD3-218ENST00000630181 PRDM2Q13029 1718 aa14.5□□□□□ -0.09
SMYD3-218ENST00000630181 URB2Q14146 1524 aaKnown RBP14.47□□□□□ -0.09
SMYD3-218ENST00000630181 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
SMYD3-218ENST00000630181 TRIM41Q8WV44 630 aa14.39□□□□□ -0.11
SMYD3-218ENST00000630181 IFT140Q96RY7 1462 aa14.37□□□□□ -0.11
SMYD3-218ENST00000630181 CCDC88BA6NC98 1476 aa14.36□□□□□ -0.11
SMYD3-218ENST00000630181 ABCC8Q09428 1581 aa14.35□□□□□ -0.11
SMYD3-218ENST00000630181 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
SMYD3-218ENST00000630181 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
SMYD3-218ENST00000630181 DNMBPQ6XZF7 1577 aa14.28□□□□□ -0.12
SMYD3-218ENST00000630181 ZNF608Q9ULD9 1512 aaPredicted RBP14.27□□□□□ -0.13
SMYD3-218ENST00000630181 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
SMYD3-218ENST00000630181 RIMBP3CA6NJZ7 1639 aa14.24□□□□□ -0.13
SMYD3-218ENST00000630181 RIMBP3BA6NNM3 1639 aa14.24□□□□□ -0.13
SMYD3-218ENST00000630181 RIMBP3Q9UFD9 1639 aa14.24□□□□□ -0.13
SMYD3-218ENST00000630181 EIF4G3O43432 1585 aaKnown RBP14.24□□□□□ -0.13
SMYD3-218ENST00000630181 TARBP1Q13395 1621 aaKnown RBP14.21□□□□□ -0.13
SMYD3-218ENST00000630181 ARHGEF11O15085 1522 aa14.19□□□□□ -0.14
SMYD3-218ENST00000630181 DAXXQ9UER7 740 aaPredicted RBP14.17□□□□□ -0.14
SMYD3-218ENST00000630181 WDR97A6NE52 1622 aa14.16□□□□□ -0.14
SMYD3-218ENST00000630181 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
SMYD3-218ENST00000630181 CHD1O14646 1710 aa14.14□□□□□ -0.15
SMYD3-218ENST00000630181 AQRO60306 1485 aaKnown RBP eCLIP14.12□□□□□ -0.151e-6■■■■□ 20.6
SMYD3-218ENST00000630181 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
SMYD3-218ENST00000630181 SOGA1O94964 1423 aa14.07□□□□□ -0.16
SMYD3-218ENST00000630181 RAD54L2Q9Y4B4 1467 aa14.05□□□□□ -0.16
SMYD3-218ENST00000630181 FGD5Q6ZNL6 1462 aa14.04□□□□□ -0.16
SMYD3-218ENST00000630181 MAGI1Q96QZ7 1491 aaPredicted RBP14.04□□□□□ -0.16
SMYD3-218ENST00000630181 ARAP1Q96P48 1450 aa14.03□□□□□ -0.16
SMYD3-218ENST00000630181 TDRD9Q8NDG6 1382 aaKnown RBP14.01□□□□□ -0.17
SMYD3-218ENST00000630181 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
SMYD3-218ENST00000630181 CUX1P39880 1505 aa14.01□□□□□ -0.17
SMYD3-218ENST00000630181 CLASP1Q7Z460 1538 aa14.01□□□□□ -0.17
SMYD3-218ENST00000630181 CYB5RLQ6IPT4 315 aa14□□□□□ -0.17
SMYD3-218ENST00000630181 GRIN2BQ13224 1484 aa14□□□□□ -0.17
SMYD3-218ENST00000630181 SYNJ1O43426 1573 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 277.8 ms