RNA–Protein interactions for RNA: ENST00000380237.5

HBE1-202, Transcript of hemoglobin subunit epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HBE1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBE1-202ENST00000380237 NISCHQ9Y2I1 1504 aa22.09■■□□□ 1.13
HBE1-202ENST00000380237 CCDC180Q9P1Z9 1646 aa19.49■□□□□ 0.71
HBE1-202ENST00000380237 ABCC9O60706 1549 aa19.01■□□□□ 0.63
HBE1-202ENST00000380237 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
HBE1-202ENST00000380237 ZCCHC6Q5VYS8 1495 aaKnown RBP18.4■□□□□ 0.54
HBE1-202ENST00000380237 NACADO15069 1562 aa18.35■□□□□ 0.53
HBE1-202ENST00000380237 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
HBE1-202ENST00000380237 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
HBE1-202ENST00000380237 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
HBE1-202ENST00000380237 UNC13AQ9UPW8 1703 aa17.95■□□□□ 0.46
HBE1-202ENST00000380237 PABPN1Q86U42 306 aaKnown RBP eCLIP17.86■□□□□ 0.45
HBE1-202ENST00000380237 SCRIBQ14160 1630 aa17.86■□□□□ 0.45
HBE1-202ENST00000380237 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
HBE1-202ENST00000380237 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
HBE1-202ENST00000380237 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
HBE1-202ENST00000380237 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.35
HBE1-202ENST00000380237 CECR2Q9BXF3 1484 aa17.18■□□□□ 0.34
HBE1-202ENST00000380237 CC2D2AQ9P2K1 1620 aa17.15■□□□□ 0.34
HBE1-202ENST00000380237 BAZ1AQ9NRL2 1556 aaPredicted RBP17.12■□□□□ 0.33
HBE1-202ENST00000380237 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
HBE1-202ENST00000380237 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.31
HBE1-202ENST00000380237 ATAD2BQ9ULI0 1458 aa16.98■□□□□ 0.31
HBE1-202ENST00000380237 SMARCA2P51531 1590 aa16.97■□□□□ 0.31
HBE1-202ENST00000380237 NCAPD3P42695 1498 aa16.94■□□□□ 0.3
HBE1-202ENST00000380237 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
HBE1-202ENST00000380237 PEG3Q9GZU2 1588 aa16.88■□□□□ 0.29
HBE1-202ENST00000380237 BAZ1BQ9UIG0 1483 aaKnown RBP16.87■□□□□ 0.29
HBE1-202ENST00000380237 HMGXB3Q12766 1538 aa16.84■□□□□ 0.29
HBE1-202ENST00000380237 WIZO95785 1651 aa16.81■□□□□ 0.28
HBE1-202ENST00000380237 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
HBE1-202ENST00000380237 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
HBE1-202ENST00000380237 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
HBE1-202ENST00000380237 CADPSQ9ULU8 1353 aa16.5■□□□□ 0.23
HBE1-202ENST00000380237 NESP48681 1621 aa16.46■□□□□ 0.23
HBE1-202ENST00000380237 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
HBE1-202ENST00000380237 PDS5BQ9NTI5 1447 aa16.42■□□□□ 0.22
HBE1-202ENST00000380237 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
HBE1-202ENST00000380237 CFTRP13569 1480 aa16.4■□□□□ 0.22
HBE1-202ENST00000380237 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
HBE1-202ENST00000380237 KIF21AQ7Z4S6 1674 aa16.26■□□□□ 0.19
HBE1-202ENST00000380237 CEP164Q9UPV0 1460 aa16.25■□□□□ 0.19
HBE1-202ENST00000380237 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
HBE1-202ENST00000380237 MRC2Q9UBG0 1479 aa16.18■□□□□ 0.18
HBE1-202ENST00000380237 THOC2Q8NI27 1593 aaKnown RBP16.14■□□□□ 0.17
HBE1-202ENST00000380237 CUX2O14529 1486 aa16.12■□□□□ 0.17
HBE1-202ENST00000380237 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
HBE1-202ENST00000380237 WDR62O43379 1518 aa16.08■□□□□ 0.16
HBE1-202ENST00000380237 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
HBE1-202ENST00000380237 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
HBE1-202ENST00000380237 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
HBE1-202ENST00000380237 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
HBE1-202ENST00000380237 CUX1P39880 1505 aa15.95■□□□□ 0.14
HBE1-202ENST00000380237 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
HBE1-202ENST00000380237 SOGA1O94964 1423 aa15.91■□□□□ 0.14
HBE1-202ENST00000380237 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
HBE1-202ENST00000380237 FGD5Q6ZNL6 1462 aa15.9■□□□□ 0.14
HBE1-202ENST00000380237 TOP2BQ02880 1626 aa15.85■□□□□ 0.13
HBE1-202ENST00000380237 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
HBE1-202ENST00000380237 SYNJ1O43426 1573 aa15.84■□□□□ 0.13
HBE1-202ENST00000380237 TRIM41Q8WV44 630 aa15.83■□□□□ 0.12
HBE1-202ENST00000380237 DNAJC5Q9H3Z4 198 aa15.82■□□□□ 0.12
HBE1-202ENST00000380237 BIVM-ERCC5R4GMW8 1640 aa15.82■□□□□ 0.12
HBE1-202ENST00000380237 TDRD9Q8NDG6 1382 aaKnown RBP15.79■□□□□ 0.12
HBE1-202ENST00000380237 TARBP1Q13395 1621 aaKnown RBP15.79■□□□□ 0.12
HBE1-202ENST00000380237 ZNF608Q9ULD9 1512 aaPredicted RBP15.78■□□□□ 0.12
HBE1-202ENST00000380237 AQRO60306 1485 aaKnown RBP eCLIP15.77■□□□□ 0.116e-7■■■■□ 26.1
HBE1-202ENST00000380237 ABCA10Q8WWZ4 1543 aa15.74■□□□□ 0.11
HBE1-202ENST00000380237 GAPVD1Q14C86 1478 aa15.7■□□□□ 0.1
HBE1-202ENST00000380237 EIF4G3O43432 1585 aaKnown RBP15.7■□□□□ 0.1
HBE1-202ENST00000380237 WDR97A6NE52 1622 aa15.69■□□□□ 0.1
HBE1-202ENST00000380237 CHIC1Q5VXU3 224 aa15.68■□□□□ 0.1
HBE1-202ENST00000380237 GRIN2BQ13224 1484 aa15.67■□□□□ 0.1
HBE1-202ENST00000380237 FBLN2P98095 1184 aa15.66■□□□□ 0.1
HBE1-202ENST00000380237 KIF27Q86VH2 1401 aa15.66■□□□□ 0.1
HBE1-202ENST00000380237 CHMP7Q8WUX9 453 aaPredicted RBP15.63■□□□□ 0.09
HBE1-202ENST00000380237 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
HBE1-202ENST00000380237 ABCA5Q8WWZ7 1642 aa15.6■□□□□ 0.09
HBE1-202ENST00000380237 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
HBE1-202ENST00000380237 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
HBE1-202ENST00000380237 ERICH3Q5RHP9 1530 aa15.56■□□□□ 0.08
HBE1-202ENST00000380237 IGF1RP08069 1367 aa15.55■□□□□ 0.08
HBE1-202ENST00000380237 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
HBE1-202ENST00000380237 SYNJ2O15056 1496 aa15.53■□□□□ 0.08
HBE1-202ENST00000380237 FHAD1B1AJZ9 1412 aa15.53■□□□□ 0.08
HBE1-202ENST00000380237 RUSC2Q8N2Y8 1516 aa15.5■□□□□ 0.07
HBE1-202ENST00000380237 FAM9AQ8IZU1 332 aaPredicted RBP15.49■□□□□ 0.07
HBE1-202ENST00000380237 CARMIL1Q5VZK9 1371 aa15.49■□□□□ 0.07
HBE1-202ENST00000380237 CHD1O14646 1710 aa15.48■□□□□ 0.07
HBE1-202ENST00000380237 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
HBE1-202ENST00000380237 ADAMTS12P58397 1594 aa15.46■□□□□ 0.07
HBE1-202ENST00000380237 EEA1Q15075 1411 aa15.46■□□□□ 0.07
HBE1-202ENST00000380237 GRIN2AQ12879 1464 aa15.45■□□□□ 0.06
HBE1-202ENST00000380237 CUL7Q14999 1698 aa15.43■□□□□ 0.06
HBE1-202ENST00000380237 RAPGEF2Q9Y4G8 1499 aa15.39■□□□□ 0.05
HBE1-202ENST00000380237 NUP160Q12769 1436 aa15.35■□□□□ 0.05
HBE1-202ENST00000380237 PRXQ9BXM0 1461 aa15.33■□□□□ 0.05
HBE1-202ENST00000380237 CEP170Q5SW79 1584 aa15.32■□□□□ 0.04
HBE1-202ENST00000380237 JPH4Q96JJ6 628 aa15.31■□□□□ 0.04
HBE1-202ENST00000380237 CLASP1Q7Z460 1538 aa15.3■□□□□ 0.04
HBE1-202ENST00000380237 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms