RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 NISCHQ9Y2I1 1504 aa39.3■■■■□ 3.88
GCFC2-202ENST00000409857 CCDC180Q9P1Z9 1646 aa34.83■■■■□ 3.17
GCFC2-202ENST00000409857 ABCC9O60706 1549 aa33.42■■■□□ 2.94
GCFC2-202ENST00000409857 ZCCHC6Q5VYS8 1495 aaKnown RBP32.85■■■□□ 2.85
GCFC2-202ENST00000409857 DCAF1Q9Y4B6 1507 aa32.62■■■□□ 2.81
GCFC2-202ENST00000409857 MYO15BQ96JP2 1530 aa32.6■■■□□ 2.81
GCFC2-202ENST00000409857 NACADO15069 1562 aa32.58■■■□□ 2.81
GCFC2-202ENST00000409857 RB1CC1Q8TDY2 1594 aa32.48■■■□□ 2.79
GCFC2-202ENST00000409857 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
GCFC2-202ENST00000409857 UNC13AQ9UPW8 1703 aa31.8■■■□□ 2.68
GCFC2-202ENST00000409857 SCRIBQ14160 1630 aa31.69■■■□□ 2.66
GCFC2-202ENST00000409857 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
GCFC2-202ENST00000409857 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
GCFC2-202ENST00000409857 PABPN1Q86U42 306 aaKnown RBP eCLIP31.25■■■□□ 2.59
GCFC2-202ENST00000409857 EIF4G1Q04637 1599 aaKnown RBP30.58■■■□□ 2.49
GCFC2-202ENST00000409857 CECR2Q9BXF3 1484 aa30.5■■■□□ 2.47
GCFC2-202ENST00000409857 BAZ1AQ9NRL2 1556 aaPredicted RBP30.45■■■□□ 2.46
GCFC2-202ENST00000409857 SMARCA4P51532 1647 aa30.41■■■□□ 2.46
GCFC2-202ENST00000409857 CC2D2AQ9P2K1 1620 aa30.34■■■□□ 2.45
GCFC2-202ENST00000409857 MROH2BQ7Z745 1585 aa30.26■■■□□ 2.43
GCFC2-202ENST00000409857 DNAJC5BQ9UF47 199 aa30.19■■■□□ 2.42
GCFC2-202ENST00000409857 PEG3Q9GZU2 1588 aa30.16■■■□□ 2.42
GCFC2-202ENST00000409857 SMARCA2P51531 1590 aa30.12■■■□□ 2.41
GCFC2-202ENST00000409857 RSF1Q96T23 1441 aaPredicted RBP30.09■■■□□ 2.41
GCFC2-202ENST00000409857 ATAD2BQ9ULI0 1458 aa30.08■■■□□ 2.41
GCFC2-202ENST00000409857 NCAPD3P42695 1498 aa30.02■■■□□ 2.4
GCFC2-202ENST00000409857 WIZO95785 1651 aa29.98■■■□□ 2.39
GCFC2-202ENST00000409857 HMGXB3Q12766 1538 aa29.96■■■□□ 2.39
GCFC2-202ENST00000409857 BAZ1BQ9UIG0 1483 aaKnown RBP29.86■■■□□ 2.37
GCFC2-202ENST00000409857 TOP2AP11388 1531 aaKnown RBP29.72■■■□□ 2.35
GCFC2-202ENST00000409857 SUPT5HO00267 1087 aaKnown RBP29.56■■■□□ 2.32
GCFC2-202ENST00000409857 CCDC88BA6NC98 1476 aa29.32■■■□□ 2.28
GCFC2-202ENST00000409857 LAMC3Q9Y6N6 1575 aa29.18■■■□□ 2.26
GCFC2-202ENST00000409857 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
GCFC2-202ENST00000409857 CFTRP13569 1480 aa29.1■■■□□ 2.25
GCFC2-202ENST00000409857 NESP48681 1621 aa29.07■■■□□ 2.24
GCFC2-202ENST00000409857 PRDM2Q13029 1718 aa29.04■■■□□ 2.24
GCFC2-202ENST00000409857 PDS5BQ9NTI5 1447 aa28.92■■■□□ 2.22
GCFC2-202ENST00000409857 KIF21AQ7Z4S6 1674 aa28.84■■■□□ 2.21
GCFC2-202ENST00000409857 FANCD2Q9BXW9 1451 aa28.8■■■□□ 2.2
GCFC2-202ENST00000409857 ERCC6Q03468 1493 aa28.79■■■□□ 2.2
GCFC2-202ENST00000409857 CEP164Q9UPV0 1460 aa28.73■■■□□ 2.19
GCFC2-202ENST00000409857 THOC2Q8NI27 1593 aaKnown RBP28.63■■■□□ 2.17
GCFC2-202ENST00000409857 MRC2Q9UBG0 1479 aa28.6■■■□□ 2.17
GCFC2-202ENST00000409857 WDR62O43379 1518 aa28.52■■■□□ 2.16
GCFC2-202ENST00000409857 ABCC8Q09428 1581 aa28.49■■■□□ 2.15
GCFC2-202ENST00000409857 URB2Q14146 1524 aaKnown RBP28.48■■■□□ 2.15
GCFC2-202ENST00000409857 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.15
GCFC2-202ENST00000409857 TOPBP1Q92547 1522 aa28.41■■■□□ 2.14
GCFC2-202ENST00000409857 CUX2O14529 1486 aa28.39■■■□□ 2.14
GCFC2-202ENST00000409857 CUX1P39880 1505 aa28.37■■■□□ 2.13
GCFC2-202ENST00000409857 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
GCFC2-202ENST00000409857 BIVM-ERCC5R4GMW8 1640 aa28.33■■■□□ 2.13
GCFC2-202ENST00000409857 TOP2BQ02880 1626 aa28.3■■■□□ 2.12
GCFC2-202ENST00000409857 SYNJ1O43426 1573 aa28.28■■■□□ 2.12
GCFC2-202ENST00000409857 POLA1P09884 1462 aaPredicted RBP28.19■■■□□ 2.1
GCFC2-202ENST00000409857 FGD5Q6ZNL6 1462 aa28.19■■■□□ 2.1
GCFC2-202ENST00000409857 IFT140Q96RY7 1462 aa28.12■■■□□ 2.09
GCFC2-202ENST00000409857 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
GCFC2-202ENST00000409857 SOGA1O94964 1423 aa28.06■■■□□ 2.08
GCFC2-202ENST00000409857 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
GCFC2-202ENST00000409857 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
GCFC2-202ENST00000409857 ABCA10Q8WWZ4 1543 aa27.98■■■□□ 2.07
GCFC2-202ENST00000409857 TRIM41Q8WV44 630 aa27.95■■■□□ 2.07
GCFC2-202ENST00000409857 CHIC1Q5VXU3 224 aa27.93■■■□□ 2.06
GCFC2-202ENST00000409857 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
GCFC2-202ENST00000409857 EIF4G3O43432 1585 aaKnown RBP27.88■■■□□ 2.05
GCFC2-202ENST00000409857 ABCA5Q8WWZ7 1642 aa27.85■■■□□ 2.05
GCFC2-202ENST00000409857 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
GCFC2-202ENST00000409857 AQRO60306 1485 aaKnown RBP eCLIP27.79■■■□□ 2.049e-6■□□□□ 10.2
GCFC2-202ENST00000409857 GAPVD1Q14C86 1478 aa27.76■■■□□ 2.04
GCFC2-202ENST00000409857 PBRM1Q86U86 1689 aa27.76■■■□□ 2.03
GCFC2-202ENST00000409857 KIF27Q86VH2 1401 aa27.73■■■□□ 2.03
GCFC2-202ENST00000409857 GRIN2BQ13224 1484 aa27.71■■■□□ 2.03
GCFC2-202ENST00000409857 ERICH3Q5RHP9 1530 aa27.67■■■□□ 2.02
GCFC2-202ENST00000409857 MAGI1Q96QZ7 1491 aaPredicted RBP27.61■■■□□ 2.01
GCFC2-202ENST00000409857 SNAPC4Q5SXM2 1469 aa27.58■■■□□ 2.01
GCFC2-202ENST00000409857 RUSC2Q8N2Y8 1516 aa27.58■■■□□ 2.01
GCFC2-202ENST00000409857 EEA1Q15075 1411 aa27.57■■■□□ 2
GCFC2-202ENST00000409857 CUL7Q14999 1698 aa27.54■■■□□ 2
GCFC2-202ENST00000409857 IGF1RP08069 1367 aa27.54■■■□□ 2
GCFC2-202ENST00000409857 ADAMTS12P58397 1594 aa27.53■■■□□ 2
GCFC2-202ENST00000409857 SYNJ2O15056 1496 aa27.48■■□□□ 1.99
GCFC2-202ENST00000409857 FHAD1B1AJZ9 1412 aa27.47■■□□□ 1.99
GCFC2-202ENST00000409857 CHD1O14646 1710 aa27.45■■□□□ 1.98
GCFC2-202ENST00000409857 CARMIL1Q5VZK9 1371 aa27.38■■□□□ 1.97
GCFC2-202ENST00000409857 CSRNP3Q8WYN3 585 aa27.37■■□□□ 1.97
GCFC2-202ENST00000409857 GRIN2AQ12879 1464 aa27.35■■□□□ 1.97
GCFC2-202ENST00000409857 CHMP7Q8WUX9 453 aaPredicted RBP27.35■■□□□ 1.97
GCFC2-202ENST00000409857 PRXQ9BXM0 1461 aa27.34■■□□□ 1.97
GCFC2-202ENST00000409857 HRCP23327 699 aa27.33■■□□□ 1.97
GCFC2-202ENST00000409857 RAPGEF2Q9Y4G8 1499 aa27.31■■□□□ 1.96
GCFC2-202ENST00000409857 FBLN2P98095 1184 aa27.29■■□□□ 1.96
GCFC2-202ENST00000409857 FAM9AQ8IZU1 332 aaPredicted RBP27.27■■□□□ 1.96
GCFC2-202ENST00000409857 KIF21BO75037 1637 aa27.27■■□□□ 1.96
GCFC2-202ENST00000409857 NUP160Q12769 1436 aa27.23■■□□□ 1.95
GCFC2-202ENST00000409857 OSCARQ8IYS5 282 aa27.21■■□□□ 1.95
GCFC2-202ENST00000409857 CEP170Q5SW79 1584 aa27.2■■□□□ 1.95
GCFC2-202ENST00000409857 PCGF6Q9BYE7 350 aa27.2■■□□□ 1.94
GCFC2-202ENST00000409857 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms