RNA–Protein interactions for RNA: ENST00000330560.7

CDCA2-201, Transcript of cell division cycle associated 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCA2, Length 3,731 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-201ENST00000330560 NISCHQ9Y2I1 1504 aa29.84■■■□□ 2.37
CDCA2-201ENST00000330560 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
CDCA2-201ENST00000330560 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
CDCA2-201ENST00000330560 SUPT5HO00267 1087 aaKnown RBP26.39■■□□□ 1.81
CDCA2-201ENST00000330560 ZCCHC6Q5VYS8 1495 aaKnown RBP25.03■■□□□ 1.6
CDCA2-201ENST00000330560 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
CDCA2-201ENST00000330560 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
CDCA2-201ENST00000330560 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
CDCA2-201ENST00000330560 FAM9AQ8IZU1 332 aaPredicted RBP24.63■■□□□ 1.53
CDCA2-201ENST00000330560 LOC105371045A0A1W2PR82 267 aa24.58■■□□□ 1.53
CDCA2-201ENST00000330560 ABCC9O60706 1549 aa24.55■■□□□ 1.52
CDCA2-201ENST00000330560 PCGF6Q9BYE7 350 aa24.53■■□□□ 1.52
CDCA2-201ENST00000330560 MYO15BQ96JP2 1530 aa24.33■■□□□ 1.49
CDCA2-201ENST00000330560 TRIM41Q8WV44 630 aa24.26■■□□□ 1.47
CDCA2-201ENST00000330560 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
CDCA2-201ENST00000330560 PPARGC1BQ86YN6 1023 aaKnown RBP24.01■■□□□ 1.43
CDCA2-201ENST00000330560 TTBK1Q5TCY1 1321 aaPredicted RBP23.96■■□□□ 1.43
CDCA2-201ENST00000330560 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
CDCA2-201ENST00000330560 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
CDCA2-201ENST00000330560 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
CDCA2-201ENST00000330560 HRCP23327 699 aa23.79■■□□□ 1.4
CDCA2-201ENST00000330560 CECR2Q9BXF3 1484 aa23.7■■□□□ 1.38
CDCA2-201ENST00000330560 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
CDCA2-201ENST00000330560 TRIM26Q12899 539 aaPredicted RBP23.56■■□□□ 1.36
CDCA2-201ENST00000330560 RB1CC1Q8TDY2 1594 aa23.47■■□□□ 1.35
CDCA2-201ENST00000330560 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
CDCA2-201ENST00000330560 UBTFP17480 764 aaKnown RBP23.4■■□□□ 1.34
CDCA2-201ENST00000330560 NACADO15069 1562 aa23.35■■□□□ 1.33
CDCA2-201ENST00000330560 WIZO95785 1651 aa23.19■■□□□ 1.3
CDCA2-201ENST00000330560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.15■■□□□ 1.3
CDCA2-201ENST00000330560 CCER1Q8TC90 406 aaPredicted RBP23.12■■□□□ 1.29
CDCA2-201ENST00000330560 ABCC8Q09428 1581 aa22.94■■□□□ 1.26
CDCA2-201ENST00000330560 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
CDCA2-201ENST00000330560 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
CDCA2-201ENST00000330560 APLP2Q06481 763 aa22.88■■□□□ 1.25
CDCA2-201ENST00000330560 CCDC88BA6NC98 1476 aa22.87■■□□□ 1.25
CDCA2-201ENST00000330560 ZEB1P37275 1124 aaPredicted RBP22.86■■□□□ 1.25
CDCA2-201ENST00000330560 HNRNPUL2Q1KMD3 747 aaKnown RBP22.86■■□□□ 1.25
CDCA2-201ENST00000330560 SOGA1O94964 1423 aa22.84■■□□□ 1.25
CDCA2-201ENST00000330560 RUSC2Q8N2Y8 1516 aa22.68■■□□□ 1.22
CDCA2-201ENST00000330560 ATP1B4Q9UN42 357 aaPredicted RBP22.66■■□□□ 1.22
CDCA2-201ENST00000330560 SMARCA4P51532 1647 aa22.65■■□□□ 1.22
CDCA2-201ENST00000330560 ITGAEP38570 1179 aa22.6■■□□□ 1.21
CDCA2-201ENST00000330560 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
CDCA2-201ENST00000330560 CEP162Q5TB80 1403 aa22.59■■□□□ 1.21
CDCA2-201ENST00000330560 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
CDCA2-201ENST00000330560 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
CDCA2-201ENST00000330560 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
CDCA2-201ENST00000330560 YTHDC1Q96MU7 727 aaKnown RBP22.43■■□□□ 1.18
CDCA2-201ENST00000330560 P3H3Q8IVL6 736 aa22.38■■□□□ 1.17
CDCA2-201ENST00000330560 ATAD2BQ9ULI0 1458 aa22.37■■□□□ 1.17
CDCA2-201ENST00000330560 TNIKQ9UKE5 1360 aa22.36■■□□□ 1.17
CDCA2-201ENST00000330560 UNC13AQ9UPW8 1703 aa22.35■■□□□ 1.17
CDCA2-201ENST00000330560 BICRAQ9NZM4 1560 aa22.35■■□□□ 1.17
CDCA2-201ENST00000330560 DIEXFQ68CQ4 756 aaKnown RBP22.32■■□□□ 1.16
CDCA2-201ENST00000330560 CLIP1P30622 1438 aa22.31■■□□□ 1.16
CDCA2-201ENST00000330560 GOLGA3Q08378 1498 aa22.29■■□□□ 1.16
CDCA2-201ENST00000330560 EEA1Q15075 1411 aa22.19■■□□□ 1.14
CDCA2-201ENST00000330560 RAPGEF2Q9Y4G8 1499 aa22.16■■□□□ 1.14
CDCA2-201ENST00000330560 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
CDCA2-201ENST00000330560 SYNJ1O43426 1573 aa22.11■■□□□ 1.13
CDCA2-201ENST00000330560 KANK4Q5T7N3 995 aaPredicted RBP22.08■■□□□ 1.13
CDCA2-201ENST00000330560 EIF4G1Q04637 1599 aaKnown RBP22.08■■□□□ 1.12
CDCA2-201ENST00000330560 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
CDCA2-201ENST00000330560 ARID3CA6NKF2 412 aa22.02■■□□□ 1.12
CDCA2-201ENST00000330560 ZNF316A6NFI3 1004 aaPredicted RBP22.01■■□□□ 1.11
CDCA2-201ENST00000330560 CENPBP07199 599 aaPredicted RBP21.97■■□□□ 1.11
CDCA2-201ENST00000330560 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
CDCA2-201ENST00000330560 NEUROD1Q13562 356 aa21.95■■□□□ 1.1
CDCA2-201ENST00000330560 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
CDCA2-201ENST00000330560 VPS8Q8N3P4 1428 aa21.92■■□□□ 1.1
CDCA2-201ENST00000330560 CUX2O14529 1486 aa21.88■■□□□ 1.09
CDCA2-201ENST00000330560 GTF3C3Q9Y5Q9 886 aa21.87■■□□□ 1.09
CDCA2-201ENST00000330560 MIER1Q8N108 512 aa21.83■■□□□ 1.09
CDCA2-201ENST00000330560 DNAJC5BQ9UF47 199 aa21.83■■□□□ 1.09
CDCA2-201ENST00000330560 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
CDCA2-201ENST00000330560 NCAPD3P42695 1498 aa21.79■■□□□ 1.08
CDCA2-201ENST00000330560 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
CDCA2-201ENST00000330560 CARMIL1Q5VZK9 1371 aa21.74■■□□□ 1.07
CDCA2-201ENST00000330560 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
CDCA2-201ENST00000330560 HIRIP3Q9BW71 556 aaPredicted RBP21.72■■□□□ 1.07
CDCA2-201ENST00000330560 CUX1P39880 1505 aa21.71■■□□□ 1.07
CDCA2-201ENST00000330560 KIF21BO75037 1637 aa21.7■■□□□ 1.06
CDCA2-201ENST00000330560 TDRD9Q8NDG6 1382 aaKnown RBP21.66■■□□□ 1.06
CDCA2-201ENST00000330560 IGF1RP08069 1367 aa21.65■■□□□ 1.06
CDCA2-201ENST00000330560 FBLN2P98095 1184 aa21.65■■□□□ 1.06
CDCA2-201ENST00000330560 ARAP1Q96P48 1450 aa21.64■■□□□ 1.05
CDCA2-201ENST00000330560 CFTRP13569 1480 aa21.63■■□□□ 1.05
CDCA2-201ENST00000330560 TOP2BQ02880 1626 aa21.63■■□□□ 1.05
CDCA2-201ENST00000330560 NESP48681 1621 aa21.62■■□□□ 1.05
CDCA2-201ENST00000330560 SIN3AQ96ST3 1273 aa21.62■■□□□ 1.05
CDCA2-201ENST00000330560 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
CDCA2-201ENST00000330560 CHIC2Q9UKJ5 165 aa21.59■■□□□ 1.05
CDCA2-201ENST00000330560 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
CDCA2-201ENST00000330560 PRXQ9BXM0 1461 aa21.57■■□□□ 1.04
CDCA2-201ENST00000330560 CCNB3Q8WWL7 1395 aa21.56■■□□□ 1.04
CDCA2-201ENST00000330560 CNGB1Q14028 1251 aaPredicted RBP21.54■■□□□ 1.04
CDCA2-201ENST00000330560 FANCD2Q9BXW9 1451 aa21.53■■□□□ 1.04
CDCA2-201ENST00000330560 FHOD3Q2V2M9 1422 aa21.52■■□□□ 1.04
CDCA2-201ENST00000330560 TRIM52Q96A61 297 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms