RNA–Protein interactions for RNA: ENST00000492487.5

SMYD3-216, Transcript of SET and MYND domain containing 3, humanhuman

TSL 3

Gene SMYD3, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-216ENST00000492487 NISCHQ9Y2I1 1504 aa19.5■□□□□ 0.71
SMYD3-216ENST00000492487 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
SMYD3-216ENST00000492487 ABCC9O60706 1549 aa16.76■□□□□ 0.27
SMYD3-216ENST00000492487 AEBP2Q6ZN18 517 aaPredicted RBP16.61■□□□□ 0.25
SMYD3-216ENST00000492487 ZCCHC6Q5VYS8 1495 aaKnown RBP16.34■□□□□ 0.21
SMYD3-216ENST00000492487 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
SMYD3-216ENST00000492487 NACADO15069 1562 aa16.12■□□□□ 0.17
SMYD3-216ENST00000492487 MYO15BQ96JP2 1530 aa16.11■□□□□ 0.17
SMYD3-216ENST00000492487 RB1CC1Q8TDY2 1594 aa16.11■□□□□ 0.17
SMYD3-216ENST00000492487 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
SMYD3-216ENST00000492487 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
SMYD3-216ENST00000492487 CHIC1Q5VXU3 224 aa15.97■□□□□ 0.15
SMYD3-216ENST00000492487 UNC13AQ9UPW8 1703 aa15.87■□□□□ 0.13
SMYD3-216ENST00000492487 SCRIBQ14160 1630 aa15.78■□□□□ 0.12
SMYD3-216ENST00000492487 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMYD3-216ENST00000492487 BICRAQ9NZM4 1560 aa15.65■□□□□ 0.1
SMYD3-216ENST00000492487 DNAJC5Q9H3Z4 198 aa15.55■□□□□ 0.08
SMYD3-216ENST00000492487 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
SMYD3-216ENST00000492487 EIF4G1Q04637 1599 aaKnown RBP15.21■□□□□ 0.03
SMYD3-216ENST00000492487 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
SMYD3-216ENST00000492487 CECR2Q9BXF3 1484 aa15.14■□□□□ 0.01
SMYD3-216ENST00000492487 SMARCA4P51532 1647 aa15.13■□□□□ 0.01
SMYD3-216ENST00000492487 BAZ1AQ9NRL2 1556 aaPredicted RBP15.1■□□□□ 0.01
SMYD3-216ENST00000492487 MROH2BQ7Z745 1585 aa15.04■□□□□ -0
SMYD3-216ENST00000492487 PEG3Q9GZU2 1588 aa14.97□□□□□ -0.01
SMYD3-216ENST00000492487 WIZO95785 1651 aa14.94□□□□□ -0.02
SMYD3-216ENST00000492487 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
SMYD3-216ENST00000492487 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
SMYD3-216ENST00000492487 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
SMYD3-216ENST00000492487 NCAPD3P42695 1498 aa14.88□□□□□ -0.03
SMYD3-216ENST00000492487 HMGXB3Q12766 1538 aa14.86□□□□□ -0.03
SMYD3-216ENST00000492487 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
SMYD3-216ENST00000492487 TOP2AP11388 1531 aaKnown RBP14.77□□□□□ -0.04
SMYD3-216ENST00000492487 SUPT5HO00267 1087 aaKnown RBP14.63□□□□□ -0.07
SMYD3-216ENST00000492487 CCDC88BA6NC98 1476 aa14.54□□□□□ -0.08
SMYD3-216ENST00000492487 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
SMYD3-216ENST00000492487 NESP48681 1621 aa14.48□□□□□ -0.09
SMYD3-216ENST00000492487 LAMC3Q9Y6N6 1575 aa14.46□□□□□ -0.09
SMYD3-216ENST00000492487 ERCC6Q03468 1493 aa14.45□□□□□ -0.1
SMYD3-216ENST00000492487 CADPSQ9ULU8 1353 aa14.42□□□□□ -0.1
SMYD3-216ENST00000492487 CFTRP13569 1480 aa14.4□□□□□ -0.1
SMYD3-216ENST00000492487 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
SMYD3-216ENST00000492487 CUX2O14529 1486 aa14.38□□□□□ -0.11
SMYD3-216ENST00000492487 KIF21AQ7Z4S6 1674 aa14.37□□□□□ -0.11
SMYD3-216ENST00000492487 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
SMYD3-216ENST00000492487 THOC2Q8NI27 1593 aaKnown RBP14.28□□□□□ -0.12
SMYD3-216ENST00000492487 FANCD2Q9BXW9 1451 aa14.26□□□□□ -0.13
SMYD3-216ENST00000492487 SENP3Q9H4L4 574 aaPredicted RBP14.23□□□□□ -0.13
SMYD3-216ENST00000492487 CEP164Q9UPV0 1460 aa14.23□□□□□ -0.13
SMYD3-216ENST00000492487 MRC2Q9UBG0 1479 aa14.21□□□□□ -0.13
SMYD3-216ENST00000492487 WDR62O43379 1518 aa14.17□□□□□ -0.14
SMYD3-216ENST00000492487 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
SMYD3-216ENST00000492487 URB2Q14146 1524 aaKnown RBP14.15□□□□□ -0.14
SMYD3-216ENST00000492487 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
SMYD3-216ENST00000492487 CUX1P39880 1505 aa14.11□□□□□ -0.15
SMYD3-216ENST00000492487 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
SMYD3-216ENST00000492487 BIVM-ERCC5R4GMW8 1640 aa14.11□□□□□ -0.15
SMYD3-216ENST00000492487 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
SMYD3-216ENST00000492487 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
SMYD3-216ENST00000492487 WRNQ14191 1432 aaPredicted RBP eCLIP14.05□□□□□ -0.165e-6■■■■■ 29.2
SMYD3-216ENST00000492487 PHF23Q9BUL5 403 aaPredicted RBP14.03□□□□□ -0.16
SMYD3-216ENST00000492487 WDR97A6NE52 1622 aa14□□□□□ -0.17
SMYD3-216ENST00000492487 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
SMYD3-216ENST00000492487 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
SMYD3-216ENST00000492487 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
SMYD3-216ENST00000492487 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
SMYD3-216ENST00000492487 RAD54L2Q9Y4B4 1467 aa13.9□□□□□ -0.18
SMYD3-216ENST00000492487 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
SMYD3-216ENST00000492487 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
SMYD3-216ENST00000492487 ABCA10Q8WWZ4 1543 aa13.86□□□□□ -0.19
SMYD3-216ENST00000492487 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
SMYD3-216ENST00000492487 SOGA1O94964 1423 aa13.85□□□□□ -0.19
SMYD3-216ENST00000492487 PBRM1Q86U86 1689 aa13.85□□□□□ -0.19
SMYD3-216ENST00000492487 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
SMYD3-216ENST00000492487 AQRO60306 1485 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■■■■□ 19.4
SMYD3-216ENST00000492487 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
SMYD3-216ENST00000492487 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
SMYD3-216ENST00000492487 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
SMYD3-216ENST00000492487 KIF27Q86VH2 1401 aa13.72□□□□□ -0.21
SMYD3-216ENST00000492487 ADAMTS12P58397 1594 aa13.71□□□□□ -0.21
SMYD3-216ENST00000492487 ERICH3Q5RHP9 1530 aa13.71□□□□□ -0.21
SMYD3-216ENST00000492487 GRIN2BQ13224 1484 aa13.7□□□□□ -0.22
SMYD3-216ENST00000492487 EEA1Q15075 1411 aa13.7□□□□□ -0.22
SMYD3-216ENST00000492487 CUL7Q14999 1698 aa13.69□□□□□ -0.22
SMYD3-216ENST00000492487 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
SMYD3-216ENST00000492487 CHD1O14646 1710 aa13.68□□□□□ -0.22
SMYD3-216ENST00000492487 MAGI1Q96QZ7 1491 aaPredicted RBP13.66□□□□□ -0.22
SMYD3-216ENST00000492487 FBLN2P98095 1184 aa13.62□□□□□ -0.23
SMYD3-216ENST00000492487 IGF1RP08069 1367 aa13.6□□□□□ -0.23
SMYD3-216ENST00000492487 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
SMYD3-216ENST00000492487 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
SMYD3-216ENST00000492487 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
SMYD3-216ENST00000492487 KIF21BO75037 1637 aa13.58□□□□□ -0.24
SMYD3-216ENST00000492487 FHAD1B1AJZ9 1412 aa13.57□□□□□ -0.24
SMYD3-216ENST00000492487 PRXQ9BXM0 1461 aa13.56□□□□□ -0.24
SMYD3-216ENST00000492487 ILDR1Q86SU0 546 aaPredicted RBP13.56□□□□□ -0.24
SMYD3-216ENST00000492487 GRIN2AQ12879 1464 aa13.55□□□□□ -0.24
SMYD3-216ENST00000492487 CEP170Q5SW79 1584 aa13.53□□□□□ -0.24
SMYD3-216ENST00000492487 CTTNBP2Q8WZ74 1663 aa13.53□□□□□ -0.24
SMYD3-216ENST00000492487 FAM9AQ8IZU1 332 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms