RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
RB1CC1-201ENST00000025008 SUPT5HO00267 1087 aaKnown RBP25.75■■□□□ 1.71
RB1CC1-201ENST00000025008 PELP1Q8IZL8 1130 aaKnown RBP25.62■■□□□ 1.69
RB1CC1-201ENST00000025008 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
RB1CC1-201ENST00000025008 SHROOM4Q9ULL8 1493 aa25■■□□□ 1.59
RB1CC1-201ENST00000025008 EHMT2Q96KQ7 1210 aa24.78■■□□□ 1.56
RB1CC1-201ENST00000025008 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
RB1CC1-201ENST00000025008 CENPBP07199 599 aaPredicted RBP24.7■■□□□ 1.55
RB1CC1-201ENST00000025008 MYT1Q01538 1121 aa24.67■■□□□ 1.54
RB1CC1-201ENST00000025008 APLP2Q06481 763 aa24.64■■□□□ 1.54
RB1CC1-201ENST00000025008 ZEB1P37275 1124 aaPredicted RBP24.6■■□□□ 1.53
RB1CC1-201ENST00000025008 ERICH6Q7L0X2 663 aa24.46■■□□□ 1.51
RB1CC1-201ENST00000025008 CCER1Q8TC90 406 aaPredicted RBP24.41■■□□□ 1.5
RB1CC1-201ENST00000025008 FAM9AQ8IZU1 332 aaPredicted RBP24.26■■□□□ 1.47
RB1CC1-201ENST00000025008 TTBK1Q5TCY1 1321 aaPredicted RBP24.11■■□□□ 1.45
RB1CC1-201ENST00000025008 NEFLP07196 543 aa23.97■■□□□ 1.43
RB1CC1-201ENST00000025008 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
RB1CC1-201ENST00000025008 YTHDC1Q96MU7 727 aaKnown RBP23.82■■□□□ 1.4
RB1CC1-201ENST00000025008 HRCP23327 699 aa23.78■■□□□ 1.4
RB1CC1-201ENST00000025008 TRIM26Q12899 539 aaPredicted RBP23.66■■□□□ 1.38
RB1CC1-201ENST00000025008 RANGAP1P46060 587 aaPredicted RBP23.57■■□□□ 1.36
RB1CC1-201ENST00000025008 UBTFP17480 764 aaKnown RBP23.54■■□□□ 1.36
RB1CC1-201ENST00000025008 ATP1B4Q9UN42 357 aaPredicted RBP23.37■■□□□ 1.33
RB1CC1-201ENST00000025008 PPARGC1BQ86YN6 1023 aaKnown RBP23.26■■□□□ 1.31
RB1CC1-201ENST00000025008 DAXXQ9UER7 740 aaPredicted RBP23.24■■□□□ 1.31
RB1CC1-201ENST00000025008 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
RB1CC1-201ENST00000025008 DIEXFQ68CQ4 756 aaKnown RBP23■■□□□ 1.27
RB1CC1-201ENST00000025008 LOC105371045A0A1W2PR82 267 aa22.97■■□□□ 1.27
RB1CC1-201ENST00000025008 RTL5Q5HYW3 569 aaPredicted RBP22.97■■□□□ 1.27
RB1CC1-201ENST00000025008 HNRNPUL2Q1KMD3 747 aaKnown RBP22.87■■□□□ 1.25
RB1CC1-201ENST00000025008 ITGAEP38570 1179 aa22.83■■□□□ 1.24
RB1CC1-201ENST00000025008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.78■■□□□ 1.24
RB1CC1-201ENST00000025008 GTF3C3Q9Y5Q9 886 aa22.76■■□□□ 1.23
RB1CC1-201ENST00000025008 POLR3GLQ9BT43 218 aa22.76■■□□□ 1.23
RB1CC1-201ENST00000025008 ZNF316A6NFI3 1004 aaPredicted RBP22.71■■□□□ 1.23
RB1CC1-201ENST00000025008 CLSPNQ9HAW4 1339 aa22.54■■□□□ 1.2
RB1CC1-201ENST00000025008 CNGB1Q14028 1251 aaPredicted RBP22.51■■□□□ 1.19
RB1CC1-201ENST00000025008 ACIN1Q9UKV3 1341 aaKnown RBP22.5■■□□□ 1.19
RB1CC1-201ENST00000025008 CDK11AQ9UQ88 783 aaPredicted RBP22.49■■□□□ 1.19
RB1CC1-201ENST00000025008 BCANQ96GW7 911 aa22.48■■□□□ 1.19
RB1CC1-201ENST00000025008 ANP32CO43423 234 aa22.35■■□□□ 1.17
RB1CC1-201ENST00000025008 MYT1LQ9UL68 1186 aa22.27■■□□□ 1.16
RB1CC1-201ENST00000025008 FAM50AQ14320 339 aaKnown RBP22.23■■□□□ 1.15
RB1CC1-201ENST00000025008 NEUROD1Q13562 356 aa22.2■■□□□ 1.14
RB1CC1-201ENST00000025008 ANP32AP39687 249 aaKnown RBP22.15■■□□□ 1.14
RB1CC1-201ENST00000025008 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.13
RB1CC1-201ENST00000025008 TRIM52Q96A61 297 aa22.12■■□□□ 1.13
RB1CC1-201ENST00000025008 ZBTB47Q9UFB7 747 aaPredicted RBP21.96■■□□□ 1.11
RB1CC1-201ENST00000025008 FKBP8Q14318 412 aa21.91■■□□□ 1.1
RB1CC1-201ENST00000025008 EIF5BO60841 1220 aaKnown RBP21.9■■□□□ 1.1
RB1CC1-201ENST00000025008 ZNF326Q5BKZ1 582 aaKnown RBP21.88■■□□□ 1.09
RB1CC1-201ENST00000025008 CANXP27824 592 aaKnown RBP21.87■■□□□ 1.09
RB1CC1-201ENST00000025008 NPM2Q86SE8 214 aaKnown RBP21.83■■□□□ 1.09
RB1CC1-201ENST00000025008 DCAF1Q9Y4B6 1507 aa21.83■■□□□ 1.08
RB1CC1-201ENST00000025008 GLIPR1L2Q4G1C9 344 aa21.82■■□□□ 1.08
RB1CC1-201ENST00000025008 SCAF1Q9H7N4 1312 aaKnown RBP21.77■■□□□ 1.08
RB1CC1-201ENST00000025008 ANP32BQ92688 251 aaKnown RBP21.75■■□□□ 1.07
RB1CC1-201ENST00000025008 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
RB1CC1-201ENST00000025008 HNRNPUQ00839 825 aaKnown RBP eCLIP21.67■■□□□ 1.06
RB1CC1-201ENST00000025008 NEFMP07197 916 aa21.62■■□□□ 1.05
RB1CC1-201ENST00000025008 UPF2Q9HAU5 1272 aaKnown RBP21.61■■□□□ 1.05
RB1CC1-201ENST00000025008 TONSLQ96HA7 1378 aa21.58■■□□□ 1.05
RB1CC1-201ENST00000025008 DDX10Q13206 875 aaKnown RBP21.56■■□□□ 1.04
RB1CC1-201ENST00000025008 NBR1Q14596 966 aa21.56■■□□□ 1.04
RB1CC1-201ENST00000025008 CCDC136Q96JN2 1154 aa21.55■■□□□ 1.04
RB1CC1-201ENST00000025008 HSP90AA1P07900 732 aaKnown RBP21.54■■□□□ 1.04
RB1CC1-201ENST00000025008 BCL11AQ9H165 835 aa21.52■■□□□ 1.04
RB1CC1-201ENST00000025008 FAM9BQ8IZU0 186 aa21.49■■□□□ 1.03
RB1CC1-201ENST00000025008 MIER1Q8N108 512 aa21.45■■□□□ 1.03
RB1CC1-201ENST00000025008 ANP32EQ9BTT0 268 aa21.43■■□□□ 1.02
RB1CC1-201ENST00000025008 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.39■■□□□ 1.01
RB1CC1-201ENST00000025008 P3H3Q8IVL6 736 aa21.37■■□□□ 1.01
RB1CC1-201ENST00000025008 SLC24A1O60721 1099 aa21.34■■□□□ 1.01
RB1CC1-201ENST00000025008 TMC1Q8TDI8 760 aa21.34■■□□□ 1.01
RB1CC1-201ENST00000025008 MRS2Q9HD23 443 aa21.32■■□□□ 1
RB1CC1-201ENST00000025008 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
RB1CC1-201ENST00000025008 DDRGK1Q96HY6 314 aa21.27■■□□□ 1
RB1CC1-201ENST00000025008 SALL2Q9Y467 1007 aaPredicted RBP21.24■□□□□ 0.99
RB1CC1-201ENST00000025008 IRX6P78412 446 aaPredicted RBP21.23■□□□□ 0.99
RB1CC1-201ENST00000025008 ARXQ96QS3 562 aa21.23■□□□□ 0.99
RB1CC1-201ENST00000025008 ZNF777Q9ULD5 760 aaPredicted RBP21.23■□□□□ 0.99
RB1CC1-201ENST00000025008 ARID3CA6NKF2 412 aa21.18■□□□□ 0.98
RB1CC1-201ENST00000025008 BECN1Q14457 450 aa21.17■□□□□ 0.98
RB1CC1-201ENST00000025008 ABCC9O60706 1549 aa21.17■□□□□ 0.98
RB1CC1-201ENST00000025008 WDR43Q15061 677 aaKnown RBP eCLIP21.16■□□□□ 0.98
RB1CC1-201ENST00000025008 FBLN2P98095 1184 aa21.14■□□□□ 0.97
RB1CC1-201ENST00000025008 TRIM44Q96DX7 344 aaPredicted RBP21.13■□□□□ 0.97
RB1CC1-201ENST00000025008 PPM1GO15355 546 aaPredicted RBP21.13■□□□□ 0.97
RB1CC1-201ENST00000025008 ERICH6BQ5W0A0 696 aa21.1■□□□□ 0.97
RB1CC1-201ENST00000025008 EIF4G2P78344 907 aaKnown RBP eCLIP21.08■□□□□ 0.97
RB1CC1-201ENST00000025008 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
RB1CC1-201ENST00000025008 GOLGA6L22H0YM25 854 aa21.02■□□□□ 0.96
RB1CC1-201ENST00000025008 TNNT2P45379 298 aaPredicted RBP21.01■□□□□ 0.95
RB1CC1-201ENST00000025008 HIRIP3Q9BW71 556 aaPredicted RBP20.99■□□□□ 0.95
RB1CC1-201ENST00000025008 CHIC2Q9UKJ5 165 aa20.99■□□□□ 0.95
RB1CC1-201ENST00000025008 PPP4R2Q9NY27 417 aa20.98■□□□□ 0.95
RB1CC1-201ENST00000025008 SUPT16HQ9Y5B9 1047 aaKnown RBP20.98■□□□□ 0.95
RB1CC1-201ENST00000025008 CLIP1P30622 1438 aa20.98■□□□□ 0.95
RB1CC1-201ENST00000025008 MYH16Q9H6N6 1097 aa20.98■□□□□ 0.95
RB1CC1-201ENST00000025008 NOP58Q9Y2X3 529 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms