RNA–Protein interactions for RNA: ENST00000620335.4

RAPGEF5-212, Transcript of Rap guanine nucleotide exchange factor 5, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF5, Length 5,506 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF5-212ENST00000620335 DCAF8L2P0C7V8 631 aa17.18■□□□□ 0.34
RAPGEF5-212ENST00000620335 FAM9AQ8IZU1 332 aaPredicted RBP15.52■□□□□ 0.07
RAPGEF5-212ENST00000620335 SUPT5HO00267 1087 aaKnown RBP15.48■□□□□ 0.07
RAPGEF5-212ENST00000620335 NISCHQ9Y2I1 1504 aa15.45■□□□□ 0.06
RAPGEF5-212ENST00000620335 SHROOM4Q9ULL8 1493 aa15.26■□□□□ 0.03
RAPGEF5-212ENST00000620335 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
RAPGEF5-212ENST00000620335 APLP2Q06481 763 aa15.11■□□□□ 0.01
RAPGEF5-212ENST00000620335 ATP1B4Q9UN42 357 aaPredicted RBP14.82□□□□□ -0.04
RAPGEF5-212ENST00000620335 RANGAP1P46060 587 aaPredicted RBP14.77□□□□□ -0.05
RAPGEF5-212ENST00000620335 MYT1LQ9UL68 1186 aa14.66□□□□□ -0.06
RAPGEF5-212ENST00000620335 TTBK1Q5TCY1 1321 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF5-212ENST00000620335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF5-212ENST00000620335 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
RAPGEF5-212ENST00000620335 UBTFP17480 764 aaKnown RBP14.42□□□□□ -0.1
RAPGEF5-212ENST00000620335 TRIM41Q8WV44 630 aa14.39□□□□□ -0.11
RAPGEF5-212ENST00000620335 CHIC1Q5VXU3 224 aa14.28□□□□□ -0.12
RAPGEF5-212ENST00000620335 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.12
RAPGEF5-212ENST00000620335 ABCC9O60706 1549 aa14.19□□□□□ -0.14
RAPGEF5-212ENST00000620335 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
RAPGEF5-212ENST00000620335 FBLN2P98095 1184 aa14.1□□□□□ -0.15
RAPGEF5-212ENST00000620335 PCGF6Q9BYE7 350 aa14.06□□□□□ -0.16
RAPGEF5-212ENST00000620335 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.18
RAPGEF5-212ENST00000620335 ITGAEP38570 1179 aa13.92□□□□□ -0.18
RAPGEF5-212ENST00000620335 CCER1Q8TC90 406 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF5-212ENST00000620335 POLR3GLQ9BT43 218 aa13.91□□□□□ -0.18
RAPGEF5-212ENST00000620335 BCANQ96GW7 911 aa13.84□□□□□ -0.19
RAPGEF5-212ENST00000620335 ESF1Q9H501 851 aaKnown RBP13.83□□□□□ -0.2
RAPGEF5-212ENST00000620335 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
RAPGEF5-212ENST00000620335 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
RAPGEF5-212ENST00000620335 PPARGC1BQ86YN6 1023 aaKnown RBP13.72□□□□□ -0.21
RAPGEF5-212ENST00000620335 CNGB1Q14028 1251 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF5-212ENST00000620335 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.23
RAPGEF5-212ENST00000620335 NEFLP07196 543 aa13.63□□□□□ -0.23
RAPGEF5-212ENST00000620335 TRIM52Q96A61 297 aa13.62□□□□□ -0.23
RAPGEF5-212ENST00000620335 ZEB1P37275 1124 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF5-212ENST00000620335 FAM50AQ14320 339 aaKnown RBP13.6□□□□□ -0.23
RAPGEF5-212ENST00000620335 ARID3CA6NKF2 412 aa13.56□□□□□ -0.24
RAPGEF5-212ENST00000620335 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
RAPGEF5-212ENST00000620335 SLC24A1O60721 1099 aa13.56□□□□□ -0.24
RAPGEF5-212ENST00000620335 CENPBP07199 599 aaPredicted RBP13.52□□□□□ -0.24
RAPGEF5-212ENST00000620335 CDK11AQ9UQ88 783 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF5-212ENST00000620335 ZNF777Q9ULD5 760 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF5-212ENST00000620335 ZNF326Q5BKZ1 582 aaKnown RBP13.44□□□□□ -0.26
RAPGEF5-212ENST00000620335 P3H3Q8IVL6 736 aa13.42□□□□□ -0.26
RAPGEF5-212ENST00000620335 CHGAP10645 457 aaKnown RBP13.39□□□□□ -0.27
RAPGEF5-212ENST00000620335 NEFMP07197 916 aa13.39□□□□□ -0.27
RAPGEF5-212ENST00000620335 DAXXQ9UER7 740 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF5-212ENST00000620335 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF5-212ENST00000620335 YTHDC1Q96MU7 727 aaKnown RBP13.37□□□□□ -0.27
RAPGEF5-212ENST00000620335 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF5-212ENST00000620335 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
RAPGEF5-212ENST00000620335 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF5-212ENST00000620335 ARID4BQ4LE39 1312 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF5-212ENST00000620335 A0A0G2JS52 829 aa13.28□□□□□ -0.28
RAPGEF5-212ENST00000620335 CLSPNQ9HAW4 1339 aa13.26□□□□□ -0.29
RAPGEF5-212ENST00000620335 NEUROD1Q13562 356 aa13.26□□□□□ -0.29
RAPGEF5-212ENST00000620335 SCRIBQ14160 1630 aa13.25□□□□□ -0.29
RAPGEF5-212ENST00000620335 C14orf37Q86TY3 774 aa13.25□□□□□ -0.29
RAPGEF5-212ENST00000620335 LOC105371045A0A1W2PR82 267 aa13.23□□□□□ -0.29
RAPGEF5-212ENST00000620335 TRIM26Q12899 539 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF5-212ENST00000620335 ERCC6Q03468 1493 aa13.2□□□□□ -0.3
RAPGEF5-212ENST00000620335 HAP1P54257 671 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF5-212ENST00000620335 PPP1R15AO75807 674 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF5-212ENST00000620335 KCNH8Q96L42 1107 aa13.15□□□□□ -0.3
RAPGEF5-212ENST00000620335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.14□□□□□ -0.311e-6■■□□□ 14.2
RAPGEF5-212ENST00000620335 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
RAPGEF5-212ENST00000620335 NPM2Q86SE8 214 aaKnown RBP13.13□□□□□ -0.31
RAPGEF5-212ENST00000620335 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
RAPGEF5-212ENST00000620335 TSPY4P0CV99 314 aa13.09□□□□□ -0.31
RAPGEF5-212ENST00000620335 TSPY10P0CW01 314 aa13.09□□□□□ -0.31
RAPGEF5-212ENST00000620335 CANXP27824 592 aaKnown RBP13.09□□□□□ -0.31
RAPGEF5-212ENST00000620335 ZBTB7CA1YPR0 619 aa13.08□□□□□ -0.32
RAPGEF5-212ENST00000620335 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
RAPGEF5-212ENST00000620335 AEBP2Q6ZN18 517 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF5-212ENST00000620335 RB1CC1Q8TDY2 1594 aa13.02□□□□□ -0.33
RAPGEF5-212ENST00000620335 MYT1Q01538 1121 aa13.01□□□□□ -0.33
RAPGEF5-212ENST00000620335 ZNF316A6NFI3 1004 aaPredicted RBP13□□□□□ -0.33
RAPGEF5-212ENST00000620335 SENP3Q9H4L4 574 aaPredicted RBP13□□□□□ -0.33
RAPGEF5-212ENST00000620335 PLEKHD1A6NEE1 506 aa12.99□□□□□ -0.33
RAPGEF5-212ENST00000620335 CHIC2Q9UKJ5 165 aa12.92□□□□□ -0.34
RAPGEF5-212ENST00000620335 ANP32CO43423 234 aa12.91□□□□□ -0.34
RAPGEF5-212ENST00000620335 LMOD2Q6P5Q4 547 aa12.91□□□□□ -0.34
RAPGEF5-212ENST00000620335 MLECQ14165 292 aa12.88□□□□□ -0.35
RAPGEF5-212ENST00000620335 MTUS2Q5JR59 1369 aa12.86□□□□□ -0.35
RAPGEF5-212ENST00000620335 ARXQ96QS3 562 aa12.85□□□□□ -0.35
RAPGEF5-212ENST00000620335 NPHP1O15259 732 aa12.84□□□□□ -0.35
RAPGEF5-212ENST00000620335 KDM2AQ9Y2K7 1162 aa12.82□□□□□ -0.36
RAPGEF5-212ENST00000620335 HDGFP51858 240 aaKnown RBP12.79□□□□□ -0.36
RAPGEF5-212ENST00000620335 HRCP23327 699 aa12.78□□□□□ -0.36
RAPGEF5-212ENST00000620335 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
RAPGEF5-212ENST00000620335 TONSLQ96HA7 1378 aa12.77□□□□□ -0.37
RAPGEF5-212ENST00000620335 CFDP1Q9UEE9 299 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF5-212ENST00000620335 TMC1Q8TDI8 760 aa12.73□□□□□ -0.37
RAPGEF5-212ENST00000620335 POGKQ9P215 609 aa12.72□□□□□ -0.37
RAPGEF5-212ENST00000620335 NACADO15069 1562 aa12.68□□□□□ -0.38
RAPGEF5-212ENST00000620335 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF5-212ENST00000620335 WDR43Q15061 677 aaKnown RBP eCLIP12.67□□□□□ -0.38
RAPGEF5-212ENST00000620335 RGL3Q3MIN7 710 aa12.66□□□□□ -0.38
RAPGEF5-212ENST00000620335 CCDC9Q9Y3X0 531 aaKnown RBP12.66□□□□□ -0.38
RAPGEF5-212ENST00000620335 CCDC180Q9P1Z9 1646 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms