RNA–Protein interactions for RNA: ENST00000531249.2

FDFT1-219, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-219ENST00000531249 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
FDFT1-219ENST00000531249 CCDC180Q9P1Z9 1646 aa28.68■■■□□ 2.18
FDFT1-219ENST00000531249 ABCC9O60706 1549 aa27.93■■■□□ 2.06
FDFT1-219ENST00000531249 DCAF8L2P0C7V8 631 aa27.18■■□□□ 1.94
FDFT1-219ENST00000531249 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
FDFT1-219ENST00000531249 NACADO15069 1562 aa26.92■■□□□ 1.9
FDFT1-219ENST00000531249 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
FDFT1-219ENST00000531249 DCAF1Q9Y4B6 1507 aa26.8■■□□□ 1.88
FDFT1-219ENST00000531249 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
FDFT1-219ENST00000531249 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
FDFT1-219ENST00000531249 UNC13AQ9UPW8 1703 aa26.28■■□□□ 1.8
FDFT1-219ENST00000531249 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.78
FDFT1-219ENST00000531249 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
FDFT1-219ENST00000531249 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
FDFT1-219ENST00000531249 DNAJC5BQ9UF47 199 aa25.41■■□□□ 1.66
FDFT1-219ENST00000531249 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
FDFT1-219ENST00000531249 CECR2Q9BXF3 1484 aa25.31■■□□□ 1.64
FDFT1-219ENST00000531249 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
FDFT1-219ENST00000531249 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.61
FDFT1-219ENST00000531249 SMARCA4P51532 1647 aa25.13■■□□□ 1.61
FDFT1-219ENST00000531249 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
FDFT1-219ENST00000531249 ATAD2BQ9ULI0 1458 aa24.94■■□□□ 1.58
FDFT1-219ENST00000531249 SMARCA2P51531 1590 aa24.89■■□□□ 1.58
FDFT1-219ENST00000531249 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
FDFT1-219ENST00000531249 NCAPD3P42695 1498 aa24.85■■□□□ 1.57
FDFT1-219ENST00000531249 PEG3Q9GZU2 1588 aa24.83■■□□□ 1.57
FDFT1-219ENST00000531249 WIZO95785 1651 aa24.8■■□□□ 1.56
FDFT1-219ENST00000531249 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
FDFT1-219ENST00000531249 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
FDFT1-219ENST00000531249 SUPT5HO00267 1087 aaKnown RBP24.56■■□□□ 1.52
FDFT1-219ENST00000531249 TOP2AP11388 1531 aaKnown RBP24.52■■□□□ 1.52
FDFT1-219ENST00000531249 CCDC88BA6NC98 1476 aa24.27■■□□□ 1.48
FDFT1-219ENST00000531249 NESP48681 1621 aa24.24■■□□□ 1.47
FDFT1-219ENST00000531249 CADPSQ9ULU8 1353 aa24.18■■□□□ 1.46
FDFT1-219ENST00000531249 LAMC3Q9Y6N6 1575 aa24.15■■□□□ 1.46
FDFT1-219ENST00000531249 CFTRP13569 1480 aa24.07■■□□□ 1.44
FDFT1-219ENST00000531249 ERCC6Q03468 1493 aa24.05■■□□□ 1.44
FDFT1-219ENST00000531249 PDS5BQ9NTI5 1447 aa24.01■■□□□ 1.43
FDFT1-219ENST00000531249 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
FDFT1-219ENST00000531249 FANCD2Q9BXW9 1451 aa23.91■■□□□ 1.42
FDFT1-219ENST00000531249 PRDM2Q13029 1718 aa23.86■■□□□ 1.41
FDFT1-219ENST00000531249 CEP164Q9UPV0 1460 aa23.85■■□□□ 1.41
FDFT1-219ENST00000531249 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
FDFT1-219ENST00000531249 THOC2Q8NI27 1593 aaKnown RBP23.75■■□□□ 1.39
FDFT1-219ENST00000531249 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
FDFT1-219ENST00000531249 WDR62O43379 1518 aa23.64■■□□□ 1.37
FDFT1-219ENST00000531249 CUX2O14529 1486 aa23.62■■□□□ 1.37
FDFT1-219ENST00000531249 TOPBP1Q92547 1522 aa23.55■■□□□ 1.36
FDFT1-219ENST00000531249 DNMBPQ6XZF7 1577 aa23.53■■□□□ 1.36
FDFT1-219ENST00000531249 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
FDFT1-219ENST00000531249 CUX1P39880 1505 aa23.49■■□□□ 1.35
FDFT1-219ENST00000531249 WRNQ14191 1432 aaPredicted RBP eCLIP23.44■■□□□ 1.34
FDFT1-219ENST00000531249 POLA1P09884 1462 aaPredicted RBP23.37■■□□□ 1.33
FDFT1-219ENST00000531249 FGD5Q6ZNL6 1462 aa23.37■■□□□ 1.33
FDFT1-219ENST00000531249 SYNJ1O43426 1573 aa23.36■■□□□ 1.33
FDFT1-219ENST00000531249 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
FDFT1-219ENST00000531249 TOP2BQ02880 1626 aa23.32■■□□□ 1.32
FDFT1-219ENST00000531249 RAD54L2Q9Y4B4 1467 aa23.31■■□□□ 1.32
FDFT1-219ENST00000531249 SOGA1O94964 1423 aa23.31■■□□□ 1.32
FDFT1-219ENST00000531249 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
FDFT1-219ENST00000531249 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
FDFT1-219ENST00000531249 ZNF608Q9ULD9 1512 aaPredicted RBP23.23■■□□□ 1.31
FDFT1-219ENST00000531249 TDRD9Q8NDG6 1382 aaKnown RBP23.16■■□□□ 1.3
FDFT1-219ENST00000531249 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.35e-8■■■□□ 19
FDFT1-219ENST00000531249 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
FDFT1-219ENST00000531249 ABCA10Q8WWZ4 1543 aa23.13■■□□□ 1.29
FDFT1-219ENST00000531249 EIF4G3O43432 1585 aaKnown RBP23.12■■□□□ 1.29
FDFT1-219ENST00000531249 WDR97A6NE52 1622 aa23.1■■□□□ 1.29
FDFT1-219ENST00000531249 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
FDFT1-219ENST00000531249 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
FDFT1-219ENST00000531249 ABCA5Q8WWZ7 1642 aa22.99■■□□□ 1.27
FDFT1-219ENST00000531249 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
FDFT1-219ENST00000531249 SNAPC4Q5SXM2 1469 aa22.93■■□□□ 1.26
FDFT1-219ENST00000531249 KIF27Q86VH2 1401 aa22.93■■□□□ 1.26
FDFT1-219ENST00000531249 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
FDFT1-219ENST00000531249 FBLN2P98095 1184 aa22.89■■□□□ 1.25
FDFT1-219ENST00000531249 RUSC2Q8N2Y8 1516 aa22.86■■□□□ 1.25
FDFT1-219ENST00000531249 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
FDFT1-219ENST00000531249 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
FDFT1-219ENST00000531249 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
FDFT1-219ENST00000531249 IGF1RP08069 1367 aa22.81■■□□□ 1.24
FDFT1-219ENST00000531249 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
FDFT1-219ENST00000531249 CHD1O14646 1710 aa22.77■■□□□ 1.24
FDFT1-219ENST00000531249 ADAMTS12P58397 1594 aa22.77■■□□□ 1.24
FDFT1-219ENST00000531249 OSCARQ8IYS5 282 aa22.76■■□□□ 1.23
FDFT1-219ENST00000531249 FHAD1B1AJZ9 1412 aa22.75■■□□□ 1.23
FDFT1-219ENST00000531249 FAM9AQ8IZU1 332 aaPredicted RBP22.73■■□□□ 1.23
FDFT1-219ENST00000531249 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
FDFT1-219ENST00000531249 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
FDFT1-219ENST00000531249 CUL7Q14999 1698 aa22.68■■□□□ 1.22
FDFT1-219ENST00000531249 CSRNP3Q8WYN3 585 aa22.64■■□□□ 1.21
FDFT1-219ENST00000531249 EEA1Q15075 1411 aa22.64■■□□□ 1.21
FDFT1-219ENST00000531249 DNAJC5Q9H3Z4 198 aa22.63■■□□□ 1.21
FDFT1-219ENST00000531249 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
FDFT1-219ENST00000531249 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
FDFT1-219ENST00000531249 NUP160Q12769 1436 aa22.55■■□□□ 1.2
FDFT1-219ENST00000531249 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
FDFT1-219ENST00000531249 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.19
FDFT1-219ENST00000531249 EHMT2Q96KQ7 1210 aa22.47■■□□□ 1.19
FDFT1-219ENST00000531249 KIAA0586Q9BVV6 1533 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms