RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 CHIC1Q5VXU3 224 aa15.69■□□□□ 0.1
GCFC2-205ENST00000470197 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
GCFC2-205ENST00000470197 PHF23Q9BUL5 403 aaPredicted RBP14.19□□□□□ -0.14
GCFC2-205ENST00000470197 PLPPR3Q6T4P5 718 aa12.98□□□□□ -0.33
GCFC2-205ENST00000470197 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
GCFC2-205ENST00000470197 ADRA2BP18089 450 aa12.62□□□□□ -0.39
GCFC2-205ENST00000470197 SENP3Q9H4L4 574 aaPredicted RBP12.6□□□□□ -0.39
GCFC2-205ENST00000470197 KCNA4P22459 653 aa12.58□□□□□ -0.4
GCFC2-205ENST00000470197 PPP6R1Q9UPN7 881 aa12.32□□□□□ -0.44
GCFC2-205ENST00000470197 CSRNP3Q8WYN3 585 aa12.22□□□□□ -0.45
GCFC2-205ENST00000470197 FOXD1Q16676 465 aa11.91□□□□□ -0.5
GCFC2-205ENST00000470197 SLC4A1APQ9BWU0 796 aaKnown RBP11.89□□□□□ -0.51
GCFC2-205ENST00000470197 ZBTB22O15209 634 aa11.75□□□□□ -0.53
GCFC2-205ENST00000470197 PPP4R3CPQ6ZMV5 832 aa11.68□□□□□ -0.54
GCFC2-205ENST00000470197 SLC24A1O60721 1099 aa11.64□□□□□ -0.55
GCFC2-205ENST00000470197 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
GCFC2-205ENST00000470197 NPM3O75607 178 aaKnown RBP11.55□□□□□ -0.56
GCFC2-205ENST00000470197 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
GCFC2-205ENST00000470197 NCBP3Q53F19 620 aaKnown RBP11.28□□□□□ -0.6
GCFC2-205ENST00000470197 AMER1Q5JTC6 1135 aaPredicted RBP11.15□□□□□ -0.63
GCFC2-205ENST00000470197 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
GCFC2-205ENST00000470197 CNKSR2Q8WXI2 1034 aa11.02□□□□□ -0.65
GCFC2-205ENST00000470197 MAPK8IP2Q13387 824 aaPredicted RBP10.97□□□□□ -0.65
GCFC2-205ENST00000470197 FKBP8Q14318 412 aa10.88□□□□□ -0.67
GCFC2-205ENST00000470197 SLC4A2P04920 1241 aa10.8□□□□□ -0.68
GCFC2-205ENST00000470197 DNAJC5BQ9UF47 199 aa10.76□□□□□ -0.69
GCFC2-205ENST00000470197 SCAF1Q9H7N4 1312 aaKnown RBP10.63□□□□□ -0.71
GCFC2-205ENST00000470197 PRKCSHP14314 528 aaPredicted RBP10.62□□□□□ -0.71
GCFC2-205ENST00000470197 RNF216Q9NWF9 866 aaPredicted RBP10.61□□□□□ -0.71
GCFC2-205ENST00000470197 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
GCFC2-205ENST00000470197 PLCB2Q00722 1185 aa10.42□□□□□ -0.74
GCFC2-205ENST00000470197 HOXD11P31277 338 aaPredicted RBP10.41□□□□□ -0.74
GCFC2-205ENST00000470197 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.75
GCFC2-205ENST00000470197 ATXN8OSP0DMR3 200 aa10.4□□□□□ -0.75
GCFC2-205ENST00000470197 DMRT2Q9Y5R5 561 aa10.29□□□□□ -0.76
GCFC2-205ENST00000470197 HAP1P54257 671 aaPredicted RBP10.27□□□□□ -0.77
GCFC2-205ENST00000470197 TAOK2Q9UL54 1235 aa10.26□□□□□ -0.77
GCFC2-205ENST00000470197 MSH5O43196 834 aa10.25□□□□□ -0.77
GCFC2-205ENST00000470197 KDM2AQ9Y2K7 1162 aa10.19□□□□□ -0.78
GCFC2-205ENST00000470197 FBLN2P98095 1184 aa10.16□□□□□ -0.78
GCFC2-205ENST00000470197 IFNLR1Q8IU57 520 aaPredicted RBP10.13□□□□□ -0.79
GCFC2-205ENST00000470197 TPRNQ4KMQ1 711 aa10.12□□□□□ -0.79
GCFC2-205ENST00000470197 BCANQ96GW7 911 aa10.12□□□□□ -0.79
GCFC2-205ENST00000470197 PKD2Q13563 968 aa10.12□□□□□ -0.79
GCFC2-205ENST00000470197 DCAF8L2P0C7V8 631 aa10.09□□□□□ -0.79
GCFC2-205ENST00000470197 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
GCFC2-205ENST00000470197 MKRN4PQ13434 485 aaPredicted RBP10.02□□□□□ -0.81
GCFC2-205ENST00000470197 VASPP50552 380 aaPredicted RBP10.01□□□□□ -0.81
GCFC2-205ENST00000470197 U3KPZ7 1027 aaPredicted RBP10.01□□□□□ -0.81
GCFC2-205ENST00000470197 VSIG10Q8N0Z9 540 aa9.97□□□□□ -0.81
GCFC2-205ENST00000470197 TIMELESSQ9UNS1 1208 aa9.96□□□□□ -0.81
GCFC2-205ENST00000470197 SPDYE4A6NLX3 237 aa9.96□□□□□ -0.81
GCFC2-205ENST00000470197 PROM2Q8N271 834 aa9.95□□□□□ -0.82
GCFC2-205ENST00000470197 ZNF219Q9P2Y4 722 aaPredicted RBP9.91□□□□□ -0.82
GCFC2-205ENST00000470197 FBXO3Q9UK99 471 aa9.88□□□□□ -0.83
GCFC2-205ENST00000470197 PAXIP1Q6ZW49 1069 aaPredicted RBP9.87□□□□□ -0.83
GCFC2-205ENST00000470197 DCAF8L1A6NGE4 600 aa9.86□□□□□ -0.83
GCFC2-205ENST00000470197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.86□□□□□ -0.832e-6■■■■□ 20.7
GCFC2-205ENST00000470197 TSHZ2Q9NRE2 1034 aa9.86□□□□□ -0.83
GCFC2-205ENST00000470197 CFAP44Q96MT7 982 aa9.84□□□□□ -0.83
GCFC2-205ENST00000470197 TULP1O00294 542 aaPredicted RBP9.82□□□□□ -0.84
GCFC2-205ENST00000470197 SAMD1Q6SPF0 538 aaPredicted RBP9.8□□□□□ -0.84
GCFC2-205ENST00000470197 RGL2O15211 777 aa9.78□□□□□ -0.84
GCFC2-205ENST00000470197 BBXQ8WY36 941 aaPredicted RBP9.74□□□□□ -0.85
GCFC2-205ENST00000470197 ECM2O94769 699 aaPredicted RBP9.69□□□□□ -0.86
GCFC2-205ENST00000470197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.68□□□□□ -0.86
GCFC2-205ENST00000470197 HNRNPUL2Q1KMD3 747 aaKnown RBP9.68□□□□□ -0.86
GCFC2-205ENST00000470197 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.65□□□□□ -0.86
GCFC2-205ENST00000470197 GTF3C3Q9Y5Q9 886 aa9.6□□□□□ -0.87
GCFC2-205ENST00000470197 SPINK5Q9NQ38 1064 aaPredicted RBP9.6□□□□□ -0.87
GCFC2-205ENST00000470197 SPRYD3Q8NCJ5 442 aa9.59□□□□□ -0.87
GCFC2-205ENST00000470197 DNAJC5Q9H3Z4 198 aa9.57□□□□□ -0.88
GCFC2-205ENST00000470197 POLA2Q14181 598 aa9.56□□□□□ -0.88
GCFC2-205ENST00000470197 SPOCK2Q92563 424 aa9.55□□□□□ -0.88
GCFC2-205ENST00000470197 CHGAP10645 457 aaKnown RBP9.55□□□□□ -0.88
GCFC2-205ENST00000470197 KLHL34Q8N239 644 aa9.54□□□□□ -0.88
GCFC2-205ENST00000470197 DAXXQ9UER7 740 aaPredicted RBP9.51□□□□□ -0.89
GCFC2-205ENST00000470197 TRHP20396 242 aaPredicted RBP9.5□□□□□ -0.89
GCFC2-205ENST00000470197 NKX1-1Q15270 411 aaPredicted RBP9.48□□□□□ -0.89
GCFC2-205ENST00000470197 RNF25Q96BH1 459 aaPredicted RBP9.48□□□□□ -0.89
GCFC2-205ENST00000470197 NBR1Q14596 966 aa9.45□□□□□ -0.9
GCFC2-205ENST00000470197 TMEM132AQ24JP5 1023 aa9.44□□□□□ -0.9
GCFC2-205ENST00000470197 ARXQ96QS3 562 aa9.43□□□□□ -0.9
GCFC2-205ENST00000470197 CIZ1Q9ULV3 898 aaPredicted RBP9.37□□□□□ -0.91
GCFC2-205ENST00000470197 ABCB7O75027 752 aa9.35□□□□□ -0.91
GCFC2-205ENST00000470197 PLCD3Q8N3E9 789 aa9.35□□□□□ -0.91
GCFC2-205ENST00000470197 GTPBP6O43824 516 aaPredicted RBP9.33□□□□□ -0.92
GCFC2-205ENST00000470197 HS6ST3Q8IZP7 471 aa9.32□□□□□ -0.92
GCFC2-205ENST00000470197 MIER1Q8N108 512 aa9.31□□□□□ -0.92
GCFC2-205ENST00000470197 CAPN15O75808 1086 aa9.26□□□□□ -0.93
GCFC2-205ENST00000470197 C14orf37Q86TY3 774 aa9.26□□□□□ -0.93
GCFC2-205ENST00000470197 OSCARQ8IYS5 282 aa9.26□□□□□ -0.93
GCFC2-205ENST00000470197 SUPT5HO00267 1087 aaKnown RBP9.25□□□□□ -0.93
GCFC2-205ENST00000470197 ZNF692Q9BU19 519 aaPredicted RBP9.25□□□□□ -0.93
GCFC2-205ENST00000470197 PABPN1Q86U42 306 aaKnown RBP eCLIP9.23□□□□□ -0.93
GCFC2-205ENST00000470197 HOMEZQ8IX15 550 aa9.22□□□□□ -0.93
GCFC2-205ENST00000470197 BRPF1P55201 1214 aaPredicted RBP9.2□□□□□ -0.94
GCFC2-205ENST00000470197 APLP2Q06481 763 aa9.2□□□□□ -0.94
GCFC2-205ENST00000470197 SSUH2Q9Y2M2 353 aa9.2□□□□□ -0.94
GCFC2-205ENST00000470197 STAG3Q9UJ98 1225 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms