RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 NISCHQ9Y2I1 1504 aa26.69■■□□□ 1.86
KDM1A-205ENST00000494920 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
KDM1A-205ENST00000494920 ABCC9O60706 1549 aa22.78■■□□□ 1.24
KDM1A-205ENST00000494920 ZCCHC6Q5VYS8 1495 aaKnown RBP22.32■■□□□ 1.16
KDM1A-205ENST00000494920 MYO15BQ96JP2 1530 aa22.15■■□□□ 1.14
KDM1A-205ENST00000494920 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
KDM1A-205ENST00000494920 NACADO15069 1562 aa22.13■■□□□ 1.13
KDM1A-205ENST00000494920 RB1CC1Q8TDY2 1594 aa22.07■■□□□ 1.12
KDM1A-205ENST00000494920 DCAF8L2P0C7V8 631 aa21.92■■□□□ 1.1
KDM1A-205ENST00000494920 UNC13AQ9UPW8 1703 aa21.67■■□□□ 1.06
KDM1A-205ENST00000494920 SCRIBQ14160 1630 aa21.53■■□□□ 1.04
KDM1A-205ENST00000494920 BICRAQ9NZM4 1560 aa21.49■■□□□ 1.03
KDM1A-205ENST00000494920 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
KDM1A-205ENST00000494920 SHROOM4Q9ULL8 1493 aa21.26■□□□□ 0.99
KDM1A-205ENST00000494920 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
KDM1A-205ENST00000494920 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
KDM1A-205ENST00000494920 DNAJC5BQ9UF47 199 aa20.71■□□□□ 0.91
KDM1A-205ENST00000494920 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
KDM1A-205ENST00000494920 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
KDM1A-205ENST00000494920 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.9
KDM1A-205ENST00000494920 MROH2BQ7Z745 1585 aa20.57■□□□□ 0.88
KDM1A-205ENST00000494920 PEG3Q9GZU2 1588 aa20.51■□□□□ 0.87
KDM1A-205ENST00000494920 ATAD2BQ9ULI0 1458 aa20.47■□□□□ 0.87
KDM1A-205ENST00000494920 SMARCA2P51531 1590 aa20.44■□□□□ 0.86
KDM1A-205ENST00000494920 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
KDM1A-205ENST00000494920 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
KDM1A-205ENST00000494920 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
KDM1A-205ENST00000494920 WIZO95785 1651 aa20.35■□□□□ 0.85
KDM1A-205ENST00000494920 BAZ1BQ9UIG0 1483 aaKnown RBP20.26■□□□□ 0.83
KDM1A-205ENST00000494920 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
KDM1A-205ENST00000494920 SUPT5HO00267 1087 aaKnown RBP19.9■□□□□ 0.78
KDM1A-205ENST00000494920 CCDC88BA6NC98 1476 aa19.9■□□□□ 0.78
KDM1A-205ENST00000494920 NESP48681 1621 aa19.84■□□□□ 0.77
KDM1A-205ENST00000494920 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.77
KDM1A-205ENST00000494920 CADPSQ9ULU8 1353 aa19.8■□□□□ 0.76
KDM1A-205ENST00000494920 CFTRP13569 1480 aa19.78■□□□□ 0.76
KDM1A-205ENST00000494920 PRDM2Q13029 1718 aa19.71■□□□□ 0.75
KDM1A-205ENST00000494920 KIF21AQ7Z4S6 1674 aa19.64■□□□□ 0.73
KDM1A-205ENST00000494920 PDS5BQ9NTI5 1447 aa19.63■□□□□ 0.73
KDM1A-205ENST00000494920 FANCD2Q9BXW9 1451 aa19.57■□□□□ 0.72
KDM1A-205ENST00000494920 ERCC6Q03468 1493 aa19.56■□□□□ 0.72
KDM1A-205ENST00000494920 THOC2Q8NI27 1593 aaKnown RBP19.55■□□□□ 0.72
KDM1A-205ENST00000494920 CEP164Q9UPV0 1460 aa19.52■□□□□ 0.72
KDM1A-205ENST00000494920 MRC2Q9UBG0 1479 aa19.46■□□□□ 0.71
KDM1A-205ENST00000494920 WDR62O43379 1518 aa19.44■□□□□ 0.7
KDM1A-205ENST00000494920 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
KDM1A-205ENST00000494920 CUX2O14529 1486 aa19.36■□□□□ 0.69
KDM1A-205ENST00000494920 DNMBPQ6XZF7 1577 aa19.33■□□□□ 0.69
KDM1A-205ENST00000494920 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
KDM1A-205ENST00000494920 CUX1P39880 1505 aa19.29■□□□□ 0.68
KDM1A-205ENST00000494920 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
KDM1A-205ENST00000494920 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
KDM1A-205ENST00000494920 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
KDM1A-205ENST00000494920 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
KDM1A-205ENST00000494920 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
KDM1A-205ENST00000494920 POLA1P09884 1462 aaPredicted RBP19.18■□□□□ 0.66
KDM1A-205ENST00000494920 FGD5Q6ZNL6 1462 aa19.15■□□□□ 0.66
KDM1A-205ENST00000494920 TARBP1Q13395 1621 aaKnown RBP19.14■□□□□ 0.65
KDM1A-205ENST00000494920 IFT140Q96RY7 1462 aa19.1■□□□□ 0.65
KDM1A-205ENST00000494920 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
KDM1A-205ENST00000494920 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
KDM1A-205ENST00000494920 SOGA1O94964 1423 aa19.02■□□□□ 0.64
KDM1A-205ENST00000494920 ZNF608Q9ULD9 1512 aaPredicted RBP19.02■□□□□ 0.64
KDM1A-205ENST00000494920 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
KDM1A-205ENST00000494920 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
KDM1A-205ENST00000494920 ABCA5Q8WWZ7 1642 aa18.95■□□□□ 0.62
KDM1A-205ENST00000494920 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.625e-7■■■□□ 18.1
KDM1A-205ENST00000494920 TDRD9Q8NDG6 1382 aaKnown RBP18.89■□□□□ 0.61
KDM1A-205ENST00000494920 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
KDM1A-205ENST00000494920 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
KDM1A-205ENST00000494920 CHIC1Q5VXU3 224 aa18.83■□□□□ 0.6
KDM1A-205ENST00000494920 GRIN2BQ13224 1484 aa18.81■□□□□ 0.6
KDM1A-205ENST00000494920 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
KDM1A-205ENST00000494920 ERICH3Q5RHP9 1530 aa18.77■□□□□ 0.6
KDM1A-205ENST00000494920 SNAPC4Q5SXM2 1469 aa18.76■□□□□ 0.59
KDM1A-205ENST00000494920 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
KDM1A-205ENST00000494920 MAGI1Q96QZ7 1491 aaPredicted RBP18.75■□□□□ 0.59
KDM1A-205ENST00000494920 ADAMTS12P58397 1594 aa18.73■□□□□ 0.59
KDM1A-205ENST00000494920 RUSC2Q8N2Y8 1516 aa18.72■□□□□ 0.59
KDM1A-205ENST00000494920 CHD1O14646 1710 aa18.69■□□□□ 0.58
KDM1A-205ENST00000494920 IGF1RP08069 1367 aa18.68■□□□□ 0.58
KDM1A-205ENST00000494920 SYNJ2O15056 1496 aa18.67■□□□□ 0.58
KDM1A-205ENST00000494920 CUL7Q14999 1698 aa18.65■□□□□ 0.58
KDM1A-205ENST00000494920 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.57
KDM1A-205ENST00000494920 GRIN2AQ12879 1464 aa18.58■□□□□ 0.57
KDM1A-205ENST00000494920 EEA1Q15075 1411 aa18.58■□□□□ 0.57
KDM1A-205ENST00000494920 PRXQ9BXM0 1461 aa18.54■□□□□ 0.56
KDM1A-205ENST00000494920 NUP160Q12769 1436 aa18.54■□□□□ 0.56
KDM1A-205ENST00000494920 CARMIL1Q5VZK9 1371 aa18.54■□□□□ 0.56
KDM1A-205ENST00000494920 CLASP1Q7Z460 1538 aa18.53■□□□□ 0.56
KDM1A-205ENST00000494920 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
KDM1A-205ENST00000494920 CHMP7Q8WUX9 453 aaPredicted RBP18.51■□□□□ 0.55
KDM1A-205ENST00000494920 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
KDM1A-205ENST00000494920 RAPGEF2Q9Y4G8 1499 aa18.47■□□□□ 0.55
KDM1A-205ENST00000494920 FBLN2P98095 1184 aa18.47■□□□□ 0.55
KDM1A-205ENST00000494920 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.55
KDM1A-205ENST00000494920 KIF21BO75037 1637 aa18.44■□□□□ 0.54
KDM1A-205ENST00000494920 DNAJC5Q9H3Z4 198 aa18.41■□□□□ 0.54
KDM1A-205ENST00000494920 SHROOM2Q13796 1616 aa18.4■□□□□ 0.54
KDM1A-205ENST00000494920 FAM9AQ8IZU1 332 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms