RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 AEBP2Q6ZN18 517 aaPredicted RBP24.17■■□□□ 1.46
GCFC2-203ENST00000427862 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
GCFC2-203ENST00000427862 PHF23Q9BUL5 403 aaPredicted RBP21.03■□□□□ 0.96
GCFC2-203ENST00000427862 SENP3Q9H4L4 574 aaPredicted RBP20.34■□□□□ 0.85
GCFC2-203ENST00000427862 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
GCFC2-203ENST00000427862 FOXD1Q16676 465 aa18.98■□□□□ 0.63
GCFC2-203ENST00000427862 PPP6R1Q9UPN7 881 aa18.49■□□□□ 0.55
GCFC2-203ENST00000427862 ADRA2BP18089 450 aa18.43■□□□□ 0.54
GCFC2-203ENST00000427862 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
GCFC2-203ENST00000427862 MSH5O43196 834 aa17.97■□□□□ 0.47
GCFC2-203ENST00000427862 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
GCFC2-203ENST00000427862 PPP4R3CPQ6ZMV5 832 aa17.16■□□□□ 0.34
GCFC2-203ENST00000427862 KCNA4P22459 653 aa17.09■□□□□ 0.33
GCFC2-203ENST00000427862 SCAF1Q9H7N4 1312 aaKnown RBP16.71■□□□□ 0.27
GCFC2-203ENST00000427862 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
GCFC2-203ENST00000427862 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
GCFC2-203ENST00000427862 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
GCFC2-203ENST00000427862 NPM3O75607 178 aaKnown RBP16.55■□□□□ 0.24
GCFC2-203ENST00000427862 DMRT2Q9Y5R5 561 aa16.31■□□□□ 0.2
GCFC2-203ENST00000427862 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
GCFC2-203ENST00000427862 RNF216Q9NWF9 866 aaPredicted RBP16.2■□□□□ 0.18
GCFC2-203ENST00000427862 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
GCFC2-203ENST00000427862 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
GCFC2-203ENST00000427862 DNAJC5BQ9UF47 199 aa16.03■□□□□ 0.16
GCFC2-203ENST00000427862 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
GCFC2-203ENST00000427862 ZBTB22O15209 634 aa15.78■□□□□ 0.12
GCFC2-203ENST00000427862 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
GCFC2-203ENST00000427862 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
GCFC2-203ENST00000427862 FOXD4L1Q9NU39 408 aa15.58■□□□□ 0.08
GCFC2-203ENST00000427862 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
GCFC2-203ENST00000427862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.04
GCFC2-203ENST00000427862 RNF39Q9H2S5 420 aa15.27■□□□□ 0.04
GCFC2-203ENST00000427862 MYCNP04198 464 aaPredicted RBP15.21■□□□□ 0.03
GCFC2-203ENST00000427862 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
GCFC2-203ENST00000427862 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
GCFC2-203ENST00000427862 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
GCFC2-203ENST00000427862 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
GCFC2-203ENST00000427862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
GCFC2-203ENST00000427862 HNRNPUL2Q1KMD3 747 aaKnown RBP14.88□□□□□ -0.03
GCFC2-203ENST00000427862 SAMD1Q6SPF0 538 aaPredicted RBP14.88□□□□□ -0.03
GCFC2-203ENST00000427862 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
GCFC2-203ENST00000427862 APLP2Q06481 763 aa14.62□□□□□ -0.07
GCFC2-203ENST00000427862 ZNF219Q9P2Y4 722 aaPredicted RBP14.58□□□□□ -0.08
GCFC2-203ENST00000427862 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
GCFC2-203ENST00000427862 CAPN15O75808 1086 aa14.48□□□□□ -0.09
GCFC2-203ENST00000427862 POLA2Q14181 598 aa14.35□□□□□ -0.11
GCFC2-203ENST00000427862 ABCB7O75027 752 aa14.28□□□□□ -0.12
GCFC2-203ENST00000427862 MKRN4PQ13434 485 aaPredicted RBP14.28□□□□□ -0.12
GCFC2-203ENST00000427862 FKBP8Q14318 412 aa14.26□□□□□ -0.13
GCFC2-203ENST00000427862 DSG3P32926 999 aa14.25□□□□□ -0.13
GCFC2-203ENST00000427862 POTEHQ6S545 545 aa14.24□□□□□ -0.13
GCFC2-203ENST00000427862 FBLN2P98095 1184 aa14.1□□□□□ -0.15
GCFC2-203ENST00000427862 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
GCFC2-203ENST00000427862 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
GCFC2-203ENST00000427862 PROM2Q8N271 834 aa13.86□□□□□ -0.19
GCFC2-203ENST00000427862 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
GCFC2-203ENST00000427862 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
GCFC2-203ENST00000427862 SPDYE2BA6NHP3 402 aa13.72□□□□□ -0.21
GCFC2-203ENST00000427862 SPDYE6P0CI01 402 aa13.72□□□□□ -0.21
GCFC2-203ENST00000427862 SPDYE2Q495Y8 402 aa13.72□□□□□ -0.21
GCFC2-203ENST00000427862 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
GCFC2-203ENST00000427862 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
GCFC2-203ENST00000427862 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
GCFC2-203ENST00000427862 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
GCFC2-203ENST00000427862 VASPP50552 380 aaPredicted RBP13.48□□□□□ -0.25
GCFC2-203ENST00000427862 RTN4Q9NQC3 1192 aaKnown RBP13.48□□□□□ -0.25
GCFC2-203ENST00000427862 AMER1Q5JTC6 1135 aaPredicted RBP13.41□□□□□ -0.26
GCFC2-203ENST00000427862 CHRDL2Q6WN34 429 aa13.41□□□□□ -0.26
GCFC2-203ENST00000427862 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
GCFC2-203ENST00000427862 IFNLR1Q8IU57 520 aaPredicted RBP13.39□□□□□ -0.27
GCFC2-203ENST00000427862 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
GCFC2-203ENST00000427862 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
GCFC2-203ENST00000427862 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
GCFC2-203ENST00000427862 MIER1Q8N108 512 aa13.22□□□□□ -0.29
GCFC2-203ENST00000427862 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
GCFC2-203ENST00000427862 CLEC11AQ9Y240 323 aa13.19□□□□□ -0.3
GCFC2-203ENST00000427862 PITPNM1O00562 1244 aa13.15□□□□□ -0.3
GCFC2-203ENST00000427862 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
GCFC2-203ENST00000427862 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
GCFC2-203ENST00000427862 PRR29P0C7W0 189 aa13.11□□□□□ -0.31
GCFC2-203ENST00000427862 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
GCFC2-203ENST00000427862 CREBZFQ9NS37 354 aa13.08□□□□□ -0.32
GCFC2-203ENST00000427862 PKD2Q13563 968 aa13.04□□□□□ -0.32
GCFC2-203ENST00000427862 PLEKHG5O94827 1062 aa13.01□□□□□ -0.33
GCFC2-203ENST00000427862 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
GCFC2-203ENST00000427862 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
GCFC2-203ENST00000427862 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
GCFC2-203ENST00000427862 NUBP1P53384 320 aa12.93□□□□□ -0.34
GCFC2-203ENST00000427862 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
GCFC2-203ENST00000427862 HAX1O00165 279 aa12.88□□□□□ -0.35
GCFC2-203ENST00000427862 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
GCFC2-203ENST00000427862 CIZ1Q9ULV3 898 aaPredicted RBP12.84□□□□□ -0.35
GCFC2-203ENST00000427862 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
GCFC2-203ENST00000427862 PRKAR2AP13861 404 aaKnown RBP12.8□□□□□ -0.36
GCFC2-203ENST00000427862 RASEFQ8IZ41 740 aa12.8□□□□□ -0.36
GCFC2-203ENST00000427862 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
GCFC2-203ENST00000427862 RGL2O15211 777 aa12.76□□□□□ -0.37
GCFC2-203ENST00000427862 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
GCFC2-203ENST00000427862 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
GCFC2-203ENST00000427862 GSE1Q14687 1217 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms