Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PCDHA13Q9Y5I0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA13Q9Y5I0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA13Q9Y5I0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA13Q9Y5I0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.44■■□□□ 1.98
PCDHA13Q9Y5I0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
PCDHA13Q9Y5I0 CAHM-201ENST00000604200 896 ntBASIC27.43■■□□□ 1.98
PCDHA13Q9Y5I0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.42■■□□□ 1.98
PCDHA13Q9Y5I0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHA13Q9Y5I0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA13Q9Y5I0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA13Q9Y5I0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.41■■□□□ 1.98
PCDHA13Q9Y5I0 LINC01003-201ENST00000564834 1764 ntBASIC27.41■■□□□ 1.98
PCDHA13Q9Y5I0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHA13Q9Y5I0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHA13Q9Y5I0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
PCDHA13Q9Y5I0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.38■■□□□ 1.97
PCDHA13Q9Y5I0 AC100797.4-201ENST00000631653 1827 ntBASIC27.38■■□□□ 1.97
PCDHA13Q9Y5I0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.38■■□□□ 1.97
PCDHA13Q9Y5I0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHA13Q9Y5I0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.37■■□□□ 1.97
PCDHA13Q9Y5I0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHA13Q9Y5I0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA13Q9Y5I0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.36■■□□□ 1.97
PCDHA13Q9Y5I0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA13Q9Y5I0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA13Q9Y5I0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA13Q9Y5I0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA13Q9Y5I0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.35■■□□□ 1.97
PCDHA13Q9Y5I0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA13Q9Y5I0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA13Q9Y5I0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA13Q9Y5I0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA13Q9Y5I0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.34■■□□□ 1.97
PCDHA13Q9Y5I0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA13Q9Y5I0 AC136428.2-201ENST00000563187 214 ntBASIC27.33■■□□□ 1.97
PCDHA13Q9Y5I0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
PCDHA13Q9Y5I0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA13Q9Y5I0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.32■■□□□ 1.96
PCDHA13Q9Y5I0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA13Q9Y5I0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA13Q9Y5I0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA13Q9Y5I0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA13Q9Y5I0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA13Q9Y5I0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
PCDHA13Q9Y5I0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA13Q9Y5I0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA13Q9Y5I0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA13Q9Y5I0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
PCDHA13Q9Y5I0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.28■■□□□ 1.96
PCDHA13Q9Y5I0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHA13Q9Y5I0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
PCDHA13Q9Y5I0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA13Q9Y5I0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA13Q9Y5I0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA13Q9Y5I0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.27■■□□□ 1.96
PCDHA13Q9Y5I0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA13Q9Y5I0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
PCDHA13Q9Y5I0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA13Q9Y5I0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
PCDHA13Q9Y5I0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA13Q9Y5I0 AC097358.2-201ENST00000607541 1159 ntBASIC27.26■■□□□ 1.95
PCDHA13Q9Y5I0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
PCDHA13Q9Y5I0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHA13Q9Y5I0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHA13Q9Y5I0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHA13Q9Y5I0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA13Q9Y5I0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA13Q9Y5I0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA13Q9Y5I0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHA13Q9Y5I0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA13Q9Y5I0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
PCDHA13Q9Y5I0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA13Q9Y5I0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA13Q9Y5I0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA13Q9Y5I0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.22■■□□□ 1.95
PCDHA13Q9Y5I0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA13Q9Y5I0 AP002414.2-202ENST00000590929 1450 ntBASIC27.21■■□□□ 1.95
PCDHA13Q9Y5I0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
PCDHA13Q9Y5I0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
PCDHA13Q9Y5I0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
PCDHA13Q9Y5I0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA13Q9Y5I0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.19■■□□□ 1.94
PCDHA13Q9Y5I0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA13Q9Y5I0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA13Q9Y5I0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.19■■□□□ 1.94
PCDHA13Q9Y5I0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.19■■□□□ 1.94
PCDHA13Q9Y5I0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA13Q9Y5I0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
PCDHA13Q9Y5I0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA13Q9Y5I0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA13Q9Y5I0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
PCDHA13Q9Y5I0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA13Q9Y5I0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA13Q9Y5I0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHA13Q9Y5I0 MIR762-201ENST00000390236 83 ntBASIC27.16■■□□□ 1.94
PCDHA13Q9Y5I0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDHA13Q9Y5I0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.15■■□□□ 1.94
PCDHA13Q9Y5I0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA13Q9Y5I0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms