Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHANK2-AS3Q9BTD1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHANK2-AS3Q9BTD1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.71■□□□□ 0.75
SHANK2-AS3Q9BTD1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHANK2-AS3Q9BTD1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHANK2-AS3Q9BTD1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHANK2-AS3Q9BTD1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHANK2-AS3Q9BTD1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.71■□□□□ 0.75
SHANK2-AS3Q9BTD1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHANK2-AS3Q9BTD1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHANK2-AS3Q9BTD1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.7■□□□□ 0.74
SHANK2-AS3Q9BTD1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHANK2-AS3Q9BTD1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.69■□□□□ 0.74
SHANK2-AS3Q9BTD1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHANK2-AS3Q9BTD1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SHANK2-AS3Q9BTD1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.69■□□□□ 0.74
SHANK2-AS3Q9BTD1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.69■□□□□ 0.74
SHANK2-AS3Q9BTD1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.69■□□□□ 0.74
SHANK2-AS3Q9BTD1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHANK2-AS3Q9BTD1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHANK2-AS3Q9BTD1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHANK2-AS3Q9BTD1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SHANK2-AS3Q9BTD1 LINC01003-201ENST00000564834 1764 ntBASIC19.67■□□□□ 0.74
SHANK2-AS3Q9BTD1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHANK2-AS3Q9BTD1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.67■□□□□ 0.74
SHANK2-AS3Q9BTD1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SHANK2-AS3Q9BTD1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHANK2-AS3Q9BTD1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHANK2-AS3Q9BTD1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHANK2-AS3Q9BTD1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SHANK2-AS3Q9BTD1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHANK2-AS3Q9BTD1 AC100797.4-201ENST00000631653 1827 ntBASIC19.65■□□□□ 0.74
SHANK2-AS3Q9BTD1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHANK2-AS3Q9BTD1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.65■□□□□ 0.74
SHANK2-AS3Q9BTD1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHANK2-AS3Q9BTD1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHANK2-AS3Q9BTD1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.64■□□□□ 0.74
SHANK2-AS3Q9BTD1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHANK2-AS3Q9BTD1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHANK2-AS3Q9BTD1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.64■□□□□ 0.73
SHANK2-AS3Q9BTD1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SHANK2-AS3Q9BTD1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SHANK2-AS3Q9BTD1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHANK2-AS3Q9BTD1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.63■□□□□ 0.73
SHANK2-AS3Q9BTD1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
SHANK2-AS3Q9BTD1 MIR762-201ENST00000390236 83 ntBASIC19.63■□□□□ 0.73
SHANK2-AS3Q9BTD1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SHANK2-AS3Q9BTD1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHANK2-AS3Q9BTD1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SHANK2-AS3Q9BTD1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK2-AS3Q9BTD1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHANK2-AS3Q9BTD1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHANK2-AS3Q9BTD1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.61■□□□□ 0.73
SHANK2-AS3Q9BTD1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SHANK2-AS3Q9BTD1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHANK2-AS3Q9BTD1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHANK2-AS3Q9BTD1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHANK2-AS3Q9BTD1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SHANK2-AS3Q9BTD1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.6■□□□□ 0.73
SHANK2-AS3Q9BTD1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHANK2-AS3Q9BTD1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHANK2-AS3Q9BTD1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHANK2-AS3Q9BTD1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHANK2-AS3Q9BTD1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SHANK2-AS3Q9BTD1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.59■□□□□ 0.73
SHANK2-AS3Q9BTD1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SHANK2-AS3Q9BTD1 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.59■□□□□ 0.73
SHANK2-AS3Q9BTD1 AP002414.2-202ENST00000590929 1450 ntBASIC19.59■□□□□ 0.73
SHANK2-AS3Q9BTD1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHANK2-AS3Q9BTD1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.58■□□□□ 0.73
SHANK2-AS3Q9BTD1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.58■□□□□ 0.72
SHANK2-AS3Q9BTD1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHANK2-AS3Q9BTD1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SHANK2-AS3Q9BTD1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHANK2-AS3Q9BTD1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.57■□□□□ 0.72
SHANK2-AS3Q9BTD1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SHANK2-AS3Q9BTD1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.56■□□□□ 0.72
SHANK2-AS3Q9BTD1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SHANK2-AS3Q9BTD1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHANK2-AS3Q9BTD1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHANK2-AS3Q9BTD1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHANK2-AS3Q9BTD1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHANK2-AS3Q9BTD1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.55■□□□□ 0.72
SHANK2-AS3Q9BTD1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.55■□□□□ 0.72
SHANK2-AS3Q9BTD1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.54■□□□□ 0.72
SHANK2-AS3Q9BTD1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHANK2-AS3Q9BTD1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHANK2-AS3Q9BTD1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHANK2-AS3Q9BTD1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.54■□□□□ 0.72
SHANK2-AS3Q9BTD1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.54■□□□□ 0.72
SHANK2-AS3Q9BTD1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHANK2-AS3Q9BTD1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHANK2-AS3Q9BTD1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHANK2-AS3Q9BTD1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHANK2-AS3Q9BTD1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.53■□□□□ 0.72
SHANK2-AS3Q9BTD1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.53■□□□□ 0.72
SHANK2-AS3Q9BTD1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.53■□□□□ 0.72
SHANK2-AS3Q9BTD1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHANK2-AS3Q9BTD1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.52■□□□□ 0.72
SHANK2-AS3Q9BTD1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms